Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 7.2e-74 280.8 175 100.0
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 1.6e-36 156.8 177 66.1
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 5.9e-36 154.8 175 56.0
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 8.9e-32 141.0 173 57.8
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 1.2e-31 140.6 179 63.1
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 1.5e-31 140.2 217 47.5
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 3.4e-31 139.0 176 52.3
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 4.9e-30 135.2 178 49.4
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 1.9e-29 133.3 175 57.7
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 2.4e-29 132.9 175 48.0
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 7.0e-29 131.3 176 52.3
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 2.7e-28 129.4 175 52.0
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 1.3e-27 127.1 185 55.7
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 1.7e-27 126.7 187 57.8
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 5.0e-27 125.2 173 56.6
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 6.6e-27 124.8 179 50.3
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 2.5e-26 122.9 181 47.0
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 2.5e-26 122.9 176 58.0
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 3.3e-26 122.5 181 46.4
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 4.3e-26 122.1 175 45.1
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 4.3e-26 122.1 175 45.1
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 4.3e-26 122.1 175 48.6
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 9.5e-26 120.9 176 48.9
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 1.6e-25 120.2 181 45.3
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 1.6e-25 120.2 175 44.6
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 2.1e-25 119.8 181 45.9
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 2.1e-25 119.8 179 55.3
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 4.7e-25 118.6 180 46.7
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 4.7e-25 118.6 177 46.9
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 4.7e-25 118.6 175 49.7
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 8.1e-25 117.9 183 45.9
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 8.1e-25 117.9 176 48.3
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 1.1e-24 117.5 266 44.0
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 1.4e-24 117.1 184 44.6
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 1.8e-24 116.7 177 45.2
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 1.8e-24 116.7 181 47.0
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 3.1e-24 115.9 183 43.7
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 3.1e-24 115.9 183 43.7
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 6.8e-24 114.8 175 44.0
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 6.8e-24 114.8 175 44.0
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 1.5e-23 113.6 174 47.1
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 2.0e-23 113.2 176 44.3
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 2.0e-23 113.2 176 44.3
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 2.0e-23 113.2 177 57.6
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 2.6e-23 112.8 178 42.7
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 3.4e-23 112.5 180 44.4
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 3.4e-23 112.5 183 43.2
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 3.4e-23 112.5 173 47.4
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 7.5e-23 111.3 181 44.8
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 7.5e-23 111.3 180 46.7
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 7.5e-23 111.3 169 54.4
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 9.8e-23 110.9 190 44.7
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 9.8e-23 110.9 187 43.9
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 1.3e-22 110.5 64 82.8
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 1.7e-22 110.2 176 54.0
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.7e-22 110.2 176 54.0
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 2.2e-22 109.8 173 48.6
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 2.2e-22 109.8 62 83.9
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 2.2e-22 109.8 62 83.9
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 3.7e-22 109.0 195 41.5
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 3.7e-22 109.0 172 46.5
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 4.9e-22 108.6 176 41.5
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 6.4e-22 108.2 184 45.1
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 6.4e-22 108.2 175 53.7
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 6.4e-22 108.2 175 47.4
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 8.3e-22 107.8 175 53.7
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 8.3e-22 107.8 175 53.7
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 8.3e-22 107.8 64 82.8
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 1.1e-21 107.5 176 44.9
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 1.1e-21 107.5 176 44.9
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.1e-21 107.5 176 52.8
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 1.9e-21 106.7 64 81.2
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 3.2e-21 105.9 64 81.2
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 3.2e-21 105.9 64 81.2
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 4.1e-21 105.5 182 52.2
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 5.4e-21 105.1 178 44.9
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 7.1e-21 104.8 176 45.5
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 9.2e-21 104.4 175 42.9
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 1.2e-20 104.0 178 41.0
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 1.2e-20 104.0 193 41.5
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 6.0e-20 101.7 176 44.9
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 6.0e-20 101.7 64 76.6
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 1.7e-19 100.1 177 50.3
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 3.0e-19 99.4 62 79.0
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 6.6e-19 98.2 183 40.4
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 8.6e-19 97.8 179 44.1
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 2.5e-18 96.3 175 40.0
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 3.3e-18 95.9 55 83.6
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 2.1e-17 93.2 64 73.4
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 6.2e-17 91.7 64 73.4
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 1.1e-16 90.9 145 46.2
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 1.1e-16 90.9 64 75.0
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 1.4e-16 90.5 257 39.7
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 4.0e-16 89.0 173 41.0
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 8.9e-16 87.8 56 75.0
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 1.5e-15 87.0 61 73.8
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 5.8e-15 85.1 64 67.2
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 9.9e-15 84.3 173 39.3
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 2.9e-14 82.8 64 64.1
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 6.4e-14 81.6 76 56.6
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 4.1e-13 79.0 146 41.8
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 6.0e-12 75.1 153 48.4
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 7.8e-12 74.7 141 48.2
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 1.7e-11 73.6 151 43.7
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 2.3e-11 73.2 64 59.4
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 2.5e-10 69.7 146 39.0
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 2.1e-09 66.6 156 47.4
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 8.1e-09 64.7 34 82.4
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 4.0e-08 62.4 34 82.4
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 1.2e-07 60.8 34 82.4
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 4.4e-07 58.9 35 74.3
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 1.7e-06 57.0 40 67.5
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 4.9e-06 55.5 147 45.6
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 8.4e-06 54.7 34 73.5


User provided reference genes

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