Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 1.9e-206 722.2 358 100.0
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 1.2e-64 251.1 179 72.1
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 1.5e-62 244.2 178 73.0
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 1.5e-62 244.2 178 73.0
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 7.6e-62 241.9 178 69.7
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 8.4e-61 238.4 157 77.7
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 3.5e-59 233.0 158 72.8
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 5.1e-58 229.2 150 76.7
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 6.6e-58 228.8 161 71.4
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 1.9e-57 227.3 183 65.6
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 1.9e-57 227.3 157 67.5
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 2.5e-57 226.9 153 75.2
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 3.6e-56 223.0 177 68.4
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 6.2e-56 222.2 159 73.0
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 8.1e-56 221.9 154 75.3
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 1.4e-55 221.1 159 73.0
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 3.1e-55 219.9 138 78.3
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 3.1e-55 219.9 159 72.3
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 3.1e-55 219.9 144 76.4
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 4.0e-55 219.5 159 72.3
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 6.9e-55 218.8 176 68.2
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 1.2e-54 218.0 154 72.7
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 2.0e-54 217.2 124 88.7
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.0e-54 217.2 158 72.2
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 2.0e-54 217.2 157 69.4
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 4.4e-54 216.1 171 65.5
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 5.8e-54 215.7 156 66.0
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 5.8e-54 215.7 158 71.5
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 7.6e-54 215.3 158 70.9
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 7.6e-54 215.3 158 72.2
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 9.9e-54 214.9 158 71.5
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.3e-53 214.5 158 71.5
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 2.9e-53 213.4 134 79.9
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 8.4e-53 211.8 177 64.4
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 8.4e-53 211.8 183 59.0
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 1.1e-52 211.5 151 73.5
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 1.9e-52 210.7 137 74.5
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 1.9e-52 210.7 124 84.7
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 1.9e-52 210.7 163 66.3
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 1.9e-52 210.7 180 66.7
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.9e-52 210.7 143 76.2
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 2.4e-52 210.3 167 67.7
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 3.2e-52 209.9 147 76.2
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 9.3e-52 208.4 168 66.7
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 1.2e-51 208.0 148 73.0
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 1.2e-51 208.0 143 72.7
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 1.2e-51 208.0 135 80.0
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 1.6e-51 207.6 153 70.6
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 1.6e-51 207.6 150 70.7
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 1.6e-51 207.6 151 71.5
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 1.6e-51 207.6 124 81.5
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 2.1e-51 207.2 126 82.5
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 2.7e-51 206.8 163 66.9
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 3.5e-51 206.5 170 64.7
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 4.6e-51 206.1 125 77.6
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 6.0e-51 205.7 176 62.5
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 7.8e-51 205.3 136 77.2
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 1.0e-50 204.9 125 81.6
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 1.0e-50 204.9 144 72.9
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 1.7e-50 204.1 134 78.4
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 1.7e-50 204.1 134 76.9
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 1.7e-50 204.1 134 76.1
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 1.7e-50 204.1 175 64.0
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 2.3e-50 203.8 176 62.5
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 3.0e-50 203.4 168 66.7
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 5.1e-50 202.6 157 63.1
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 6.6e-50 202.2 142 71.8
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 1.1e-49 201.4 176 61.9
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 1.5e-49 201.1 134 75.4
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 1.9e-49 200.7 162 63.6
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 2.5e-49 200.3 132 75.8
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 3.3e-49 199.9 163 62.6
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 4.3e-49 199.5 132 73.5
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 4.3e-49 199.5 127 80.3
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 4.3e-49 199.5 126 77.0
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 7.3e-49 198.7 136 72.1
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 7.3e-49 198.7 129 77.5
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 9.6e-49 198.4 129 75.2
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 9.6e-49 198.4 124 77.4
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 1.3e-48 198.0 134 74.6
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 2.1e-48 197.2 126 79.4
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 6.2e-48 195.7 167 64.1
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 3.1e-47 193.4 129 72.1
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 4.0e-47 193.0 155 68.4
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 6.4e-45 185.7 142 69.7
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 8.4e-45 185.3 142 69.7
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 8.4e-45 185.3 156 62.8
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 2.1e-43 180.6 132 71.2
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 1.0e-42 178.3 124 72.6
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 1.1e-41 174.9 168 54.8
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 1.1e-41 174.9 124 71.0
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 1.5e-41 174.5 169 58.6
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 2.1e-40 170.6 141 69.5
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 6.2e-40 169.1 131 66.4
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 2.6e-38 163.7 109 78.9
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 4.9e-37 159.5 141 67.4
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 1.1e-36 158.3 102 81.4
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.9e-36 157.5 106 73.6
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 1.2e-35 154.8 126 66.7
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 1.6e-32 144.4 130 60.8
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 2.2e-29 134.0 83 83.1
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 4.6e-27 126.3 134 51.5
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 6.0e-27 125.9 171 45.0
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.0e-26 125.2 81 77.8
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 5.7e-25 119.4 125 56.8
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 2.2e-24 117.5 107 57.0
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 5.3e-23 112.8 126 50.0
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 3.8e-21 106.7 60 88.3
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 6.5e-21 105.9 66 80.3
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 6.1e-19 99.4 170 38.8
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 6.7e-18 95.9 68 70.6
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 2.2e-16 90.9 58 75.9
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 2.4e-15 87.4 66 60.6
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 4.1e-15 86.7 62 66.1
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 5.9e-14 82.8 106 44.3
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 9.4e-12 75.5 73 52.1
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 3.9e-10 70.1 47 66.0
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 1.1e-09 68.6 61 59.0
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 1.3e-08 65.1 100 42.0


User provided reference genes

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