Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G006500 Manihot esculenta HOM05D005120 ORTHO05D006174 1.2e-281 972.6 516 100.0
Potri.003G099600 Populus trichocarpa HOM05D005120 ORTHO05D006174 2.8e-219 765.4 487 84.4
CiPaw.11G101100 Carya illinoinensis HOM05D005120 ORTHO05D006174 3.2e-215 751.9 471 82.8
Cfa012552 Carpinus fangiana HOM05D005120 ORTHO05D006174 9.4e-215 750.4 471 84.1
Thecc.03G314000 Theobroma cacao HOM05D005120 ORTHO05D006174 2.0e-212 742.7 536 73.9
Duzib205G1724 Durio zibethinus HOM05D005120 ORTHO05D006174 9.8e-212 740.3 540 74.3
Lj4g0011317 Lotus japonicus HOM05D005120 ORTHO05D006174 9.8e-212 740.3 529 76.0
TWI60G0565 Tripterygium wilfordii HOM05D005120 ORTHO05D006174 1.7e-211 739.6 525 77.1
Sabra03G0067700 Salix brachista HOM05D005120 ORTHO05D006174 1.2e-209 733.4 460 85.0
Gorai.003G186700 Gossypium raimondii HOM05D005120 ORTHO05D006174 3.5e-209 731.9 536 74.6
Gohir.D03G177466 Gossypium hirsutum HOM05D005120 ORTHO05D006174 1.0e-208 730.3 536 74.4
CANSAT21G0750 Cannabis sativa HOM05D005120 ORTHO05D006174 1.3e-208 729.9 514 76.7
Gohir.A03G000018 Gossypium hirsutum HOM05D005120 ORTHO05D006174 2.9e-208 728.8 537 74.3
Thhalv10007389m.g Eutrema salsugineum HOM05D005120 ORTHO05D006174 2.5e-207 725.7 524 76.1
Prupe.5G024500 Prunus persica HOM05D005120 ORTHO05D006174 7.2e-207 724.2 526 75.1
Eucgr.E01259 Eucalyptus grandis HOM05D005120 ORTHO05D006174 1.6e-206 723.0 456 83.1
MELO3C026723.2 Cucumis melo HOM05D005120 ORTHO05D006174 3.6e-206 721.8 516 75.4
MD06G1023600 Malus domestica HOM05D005120 ORTHO05D006174 4.7e-206 721.5 513 76.2
BcaC05g27233 Brassica carinata HOM05D005120 ORTHO05D006174 6.1e-206 721.1 519 75.3
C05p31470 Brassica napus HOM05D005120 ORTHO05D006174 1.4e-205 719.9 519 75.7
Solyc08g076290.3 Solanum lycopersicum HOM05D005120 ORTHO05D006174 3.0e-205 718.8 492 77.2
Cpa.g.sc757.1 Carica papaya HOM05D005120 ORTHO05D006174 4.0e-205 718.4 465 82.6
CsaV3_3G030430 Cucumis sativus L. HOM05D005120 ORTHO05D006174 4.0e-205 718.4 517 75.4
PGR042G0860 Punica granatum HOM05D005120 ORTHO05D006174 5.2e-205 718.0 494 78.9
THA.LOC104798500 Tarenaya hassleriana HOM05D005120 ORTHO05D006174 5.2e-205 718.0 521 75.2
Sopen08g024900 Solanum pennellii HOM05D005120 ORTHO05D006174 6.8e-205 717.6 446 83.6
BolC5t31871H Brassica oleracea HOM05D005120 ORTHO05D006174 8.9e-205 717.2 458 82.3
BraA09t38958Z Brassica rapa HOM05D005120 ORTHO05D006174 2.0e-204 716.1 519 74.8
GSVIVG01029984001 Vitis vinifera HOM05D005120 ORTHO05D006174 2.6e-204 715.7 455 83.5
CARHR031430 Cardamine hirsuta HOM05D005120 ORTHO05D006174 7.5e-204 714.1 519 75.7
Rhsim11G0027600 Rhododendron simsii HOM05D005120 ORTHO05D006174 1.3e-203 713.4 533 72.4
Sp1g27750 Schrenkiella parvula HOM05D005120 ORTHO05D006174 1.3e-203 713.4 517 75.4
QL12p000342 Quercus lobata HOM05D005120 ORTHO05D006174 3.7e-203 711.8 452 82.3
PGSC0003DMG402009291 Solanum tuberosum HOM05D005120 ORTHO05D006174 6.3e-203 711.1 437 84.7
Haze_08107 Corylus avellana HOM05D005120 ORTHO05D006174 8.3e-203 710.7 525 74.3
Cc08_g03980 Coffea canephora HOM05D005120 ORTHO05D006174 1.4e-202 709.9 535 72.7
BcaC05g27930 Brassica carinata HOM05D005120 ORTHO05D006174 1.8e-202 709.5 518 74.5
RcHm_v2.0_Chr7g0212851 Rosa chinensis HOM05D005120 ORTHO05D006174 3.1e-202 708.8 484 78.3
ClCG07G002270 Citrullus lanatus HOM05D005120 ORTHO05D006174 7.0e-202 707.6 524 74.2
Carub.0001s3040 Capsella rubella HOM05D005120 ORTHO05D006174 9.2e-202 707.2 465 81.1
FAN08G2640 Fragaria x ananassa HOM05D005120 ORTHO05D006174 2.0e-201 706.1 501 76.2
Nitab4.5_0000543g0120 Nicotiana tabacum HOM05D005120 ORTHO05D006174 2.0e-201 706.1 444 82.7
BcaB03g13768 Brassica carinata HOM05D005120 ORTHO05D006174 3.5e-201 705.3 458 81.2
BraA05t21413Z Brassica rapa HOM05D005120 ORTHO05D006174 5.9e-201 704.5 518 73.9
FAN18G1216 Fragaria x ananassa HOM05D005120 ORTHO05D006174 7.8e-201 704.1 512 74.6
AL1G46150 Arabidopsis lyrata HOM05D005120 ORTHO05D006174 1.0e-200 703.7 458 82.1
Glyma.16G095100 Glycine max HOM05D005120 ORTHO05D006174 1.0e-200 703.7 490 76.3
FAN18G2593 Fragaria x ananassa HOM05D005120 ORTHO05D006174 1.3e-200 703.4 512 74.2
Aa31LG2G13920 Aethionema arabicum HOM05D005120 ORTHO05D006174 1.7e-200 703.0 518 75.1
FvH4_5g23540 Fragaria vesca HOM05D005120 ORTHO05D006174 1.7e-200 703.0 512 74.4
COL.COLO4_16896 Corchorus olitorius HOM05D005120 ORTHO05D006174 2.3e-200 702.6 454 80.4
Medtr8g070830 Medicago truncatula HOM05D005120 ORTHO05D006174 2.3e-200 702.6 467 78.2
AT1G32080 Arabidopsis thaliana HOM05D005120 ORTHO05D006174 3.8e-200 701.8 463 81.4
Sed0007636 Sechium edule HOM05D005120 ORTHO05D006174 1.5e-199 699.9 467 79.0
FAN04G0205 Fragaria x ananassa HOM05D005120 ORTHO05D006174 1.9e-199 699.5 485 77.9
Atru.chr6.1569 Acer truncatum HOM05D005120 ORTHO05D006174 4.3e-199 698.4 457 81.4
Migut.A00586 Erythranthe guttata HOM05D005120 ORTHO05D006174 4.3e-199 698.4 530 71.1
TAR374G0846 Trochodendron aralioides HOM05D005120 ORTHO05D006174 1.2e-198 696.8 502 75.7
Sed0003941 Sechium edule HOM05D005120 ORTHO05D006174 1.6e-198 696.4 522 72.2
Lalb_Chr16g0391911 Lupinus albus HOM05D005120 ORTHO05D006174 2.1e-198 696.0 445 81.6
arahy.Tifrunner.gnm1.ann1.H9FFKJ Arachis hypogaea HOM05D005120 ORTHO05D006174 6.1e-198 694.5 491 76.2
MSTRG.11896 Avicennia marina HOM05D005120 ORTHO05D006174 2.3e-197 692.6 466 78.8
SGA_v2.0_scaffold42G16013 Striga asiatica HOM05D005120 ORTHO05D006174 3.0e-197 692.2 490 75.9
BcaB07g32869 Brassica carinata HOM05D005120 ORTHO05D006174 1.2e-196 690.3 522 73.8
Phvul.003G274000 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 2.0e-196 689.5 462 78.1
Oeu042231.1 Olea europaea HOM05D005120 ORTHO05D006174 3.4e-196 688.7 485 75.5
Lj8A318T44 Lonicera japonica HOM05D005120 ORTHO05D006174 4.4e-196 688.3 515 72.0
vmacro00236 Vaccinium macrocarpon HOM05D005120 ORTHO05D006174 4.4e-196 688.3 449 80.4
VMungo0251G1066 Vigna mungo HOM05D005120 ORTHO05D006174 7.5e-196 687.6 446 79.8
Lsat_1_v5_gn_6_17781 Lactuca sativa HOM05D005120 ORTHO05D006174 9.8e-196 687.2 522 73.2
Nitab4.5_0006395g0010 Nicotiana tabacum HOM05D005120 ORTHO05D006174 1.3e-195 686.8 421 84.3
Actinidia27272 Actinidia chinensis HOM05D005120 ORTHO05D006174 6.4e-195 684.5 500 72.6
C05p39360 Brassica napus HOM05D005120 ORTHO05D006174 8.3e-195 684.1 504 74.0
BolC5t32672H Brassica oleracea HOM05D005120 ORTHO05D006174 8.3e-195 684.1 504 74.0
Psat4g111760 Pisum sativum HOM05D005120 ORTHO05D006174 8.3e-195 684.1 466 77.7
Dinv29029 Davidia involucrata HOM05D005120 ORTHO05D006174 1.8e-194 682.9 434 82.9
Nn1g01918 Nelumbo nucifera HOM05D005120 ORTHO05D006174 3.2e-194 682.2 466 78.1
SalBow1G1967 Salvia bowleyana HOM05D005120 ORTHO05D006174 4.1e-194 681.8 440 80.9
A05p25290 Brassica napus HOM05D005120 ORTHO05D006174 2.7e-193 679.1 504 73.6
Aqoxy7G00879 Aquilegia oxysepala HOM05D005120 ORTHO05D006174 1.7e-192 676.4 475 76.4
Peaxi162Scf00408g00023 Petunia axillaris HOM05D005120 ORTHO05D006174 3.0e-192 675.6 488 74.2
arahy.Tifrunner.gnm1.ann1.PMQ83Q Arachis hypogaea HOM05D005120 ORTHO05D006174 8.6e-192 674.1 438 80.4
TPR.G6179 Trifolium pratense HOM05D005120 ORTHO05D006174 8.6e-192 674.1 497 73.4
AUR62018612 Chenopodium quinoa HOM05D005120 ORTHO05D006174 1.5e-191 673.3 515 70.5
Ah.07g201110 Amaranthus hybridus HOM05D005120 ORTHO05D006174 2.5e-191 672.5 522 68.4
Sc07g0008440 Simmondsia chinensis HOM05D005120 ORTHO05D006174 3.3e-191 672.2 466 75.8
CAN.G773.16 Capsicum annuum HOM05D005120 ORTHO05D006174 9.5e-191 670.6 415 84.1
A09p34100 Brassica napus HOM05D005120 ORTHO05D006174 8.0e-190 667.5 491 73.7
MBI04_g36023_MAGBIO Magnolia biondii HOM05D005120 ORTHO05D006174 1.1e-189 667.2 467 75.6
Aa31LG2G11060 Aethionema arabicum HOM05D005120 ORTHO05D006174 2.3e-189 666.0 431 82.1
HanXRQChr02g0050021 Helianthus annuus HOM05D005120 ORTHO05D006174 2.3e-189 666.0 502 70.5
Ca_22546_v3 Cicer arietinum L. HOM05D005120 ORTHO05D006174 1.5e-188 663.3 406 83.5
SGA_v2.0_scaffold89G27426 Striga asiatica HOM05D005120 ORTHO05D006174 1.5e-188 663.3 455 77.6
Hund14388 Selenicereus undatus HOM05D005120 ORTHO05D006174 2.6e-188 662.5 464 74.6
EL10Ac5g11981 Beta vulgaris HOM05D005120 ORTHO05D006174 4.4e-188 661.8 484 72.7
Glyma.01G009900 Glycine max HOM05D005120 ORTHO05D006174 4.4e-188 661.8 451 76.7
Phvul.002G132800 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 1.0e-184 650.6 459 74.1
Glyma.09G211200 Glycine max HOM05D005120 ORTHO05D006174 3.9e-184 648.7 457 74.2
AUR62007376 Chenopodium quinoa HOM05D005120 ORTHO05D006174 8.6e-184 647.5 404 81.9
ECA233G2235 Erigeron canadensis HOM05D005120 ORTHO05D006174 2.1e-182 642.9 439 76.8
CDE06G0533 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 4.0e-181 638.6 450 74.0
Nn3g19343 Nelumbo nucifera HOM05D005120 ORTHO05D006174 4.4e-180 635.2 466 72.1
Os01g0511600 Oryza sativa ssp. japonica HOM05D005120 ORTHO05D006174 9.9e-180 634.0 430 76.0
ATR0829G037 Amborella trichopoda HOM05D005120 ORTHO05D006174 6.4e-179 631.3 429 78.1
PSO717G0011 Papaver somniferum HOM05D005120 ORTHO05D006174 8.3e-179 630.9 528 67.6
PSO675G2578 Papaver somniferum HOM05D005120 ORTHO05D006174 1.0e-176 624.0 523 67.5
Hund11160 Selenicereus undatus HOM05D005120 ORTHO05D006174 1.0e-176 624.0 484 71.1
Atru.chr6.1566 Acer truncatum HOM05D005120 ORTHO05D006174 1.6e-174 616.7 486 72.8
Lalb_Chr16g0380871 Lupinus albus HOM05D005120 ORTHO05D006174 2.1e-174 616.3 454 69.4
Zm00001eb025160 Zea mays HOM05D005120 ORTHO05D006174 5.2e-173 611.7 455 71.0
unitig_747.g21935 Utricularia gibba HOM05D005120 ORTHO05D006174 3.5e-169 599.0 462 70.6
CSS0018999 Camellia sinensis var. sinensis HOM05D005120 ORTHO05D006174 2.4e-165 586.3 421 76.2
DCAR_004262 Daucus carota HOM05D005120 ORTHO05D006174 3.1e-165 585.9 435 71.7
arahy.Tifrunner.gnm1.ann1.1W9K9Y Arachis hypogaea HOM05D005120 ORTHO05D006174 2.9e-155 552.7 438 68.0
arahy.Tifrunner.gnm1.ann1.5B6WJ4 Arachis hypogaea HOM05D005120 ORTHO05D006174 2.9e-155 552.7 438 68.0
AagrBONN_evm.TU.Sc2ySwM_117.3701 Anthoceros agrestis HOM05D005120 ORTHO05D006174 1.2e-140 504.2 417 62.6
Pp3c1_16500 Physcomitrium patens HOM05D005120 ORTHO05D006174 5.7e-135 485.3 430 60.0
Ciclev10003461m.g Citrus clementina HOM05D005120 ORTHO05D006174 9.7e-135 484.6 378 70.4
Mapoly0008s0007 Marchantia polymorpha HOM05D005120 ORTHO05D006174 4.8e-134 482.3 431 58.7
Actinidia01339 Actinidia chinensis HOM05D005120 ORTHO05D006174 6.3e-134 481.9 376 71.3
Dinv06901 Davidia involucrata HOM05D005120 ORTHO05D006174 3.6e-129 466.1 334 71.9
SMO347G0341 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 6.1e-121 438.7 367 62.1
Atru.chr6.1568 Acer truncatum HOM05D005120 ORTHO05D006174 2.6e-108 396.7 230 92.2
PRCOL_00000663 Prasinoderma coloniale HOM05D005120 ORTHO05D006174 1.3e-99 367.9 434 48.2
Atru.chr6.1567 Acer truncatum HOM05D005120 ORTHO05D006174 3.7e-94 349.7 257 72.8
Lalb_Chr16g0380881 Lupinus albus HOM05D005120 ORTHO05D006174 1.8e-93 347.4 430 49.1
FAN13G2921 Fragaria x ananassa HOM05D005120 ORTHO05D006174 3.5e-84 316.6 360 53.6
Cre09.g394850 Chlamydomonas reinhardtii HOM05D005120 ORTHO05D006174 6.0e-76 289.3 465 37.8
Glyma.08G265967 Glycine max HOM05D005120 ORTHO05D006174 2.1e-73 280.8 169 88.8
SMO367G1009 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 3.7e-70 270.0 386 40.2
CANSAT64G2484 Cannabis sativa HOM05D005120 ORTHO05D006174 1.9e-69 267.7 156 92.3
Zm00001eb025140 Zea mays HOM05D005120 ORTHO05D006174 1.1e-66 258.5 256 56.2
Pp3c4_7680 Physcomitrium patens HOM05D005120 ORTHO05D006174 1.7e-62 244.6 397 34.0
AagrBONN_evm.TU.Sc2ySwM_368.2516 Anthoceros agrestis HOM05D005120 ORTHO05D006174 3.6e-57 226.9 376 35.9
arahy.Tifrunner.gnm1.ann1.B01XES Arachis hypogaea HOM05D005120 ORTHO05D006174 1.2e-55 221.9 251 53.0
PRCOL_00006607 Prasinoderma coloniale HOM05D005120 ORTHO05D006174 1.2e-55 221.9 453 36.9
CBR_g23155 Chara braunii HOM05D005120 ORTHO05D006174 1.9e-53 214.5 162 69.1
PGR044G1750 Punica granatum HOM05D005120 ORTHO05D006174 8.1e-41 172.6 142 69.0
SEGI_09610 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 1.3e-38 165.2 126 63.5
SEGI_28661 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 2.2e-30 137.9 200 47.5
CARHR291910 Cardamine hirsuta HOM05D005120 ORTHO05D006174 6.0e-28 129.8 86 74.4
CBR_g23153 Chara braunii HOM05D005120 ORTHO05D006174 1.5e-26 125.2 169 44.4
VMungo0647G0996 Vigna mungo HOM05D005120 ORTHO05D006174 2.4e-24 117.9 97 70.1
Oeu023967.3 Olea europaea HOM05D005120 ORTHO05D006174 4.6e-20 103.6 127 49.6
MCO13G610 Micromonas commoda HOM05D005120 ORTHO05D006174 5.7e-18 96.7 386 25.4
PRCOL_00005007 Prasinoderma coloniale HOM05D013059 ORTHO05D014381 6.1e-12 76.6 221 29.0
PRCOL_00001036 Prasinoderma coloniale HOM05D001145 ORTHO05D014381 3.0e-11 74.3 422 23.0
CDE03G0049 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 2.8e-09 67.8 67 61.2


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