Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G137500 Manihot esculenta HOM05D007770 ORTHO05D009827 6.5e-69 263.8 126 100.0
Duzib150G1352 Durio zibethinus HOM05D007770 ORTHO05D009827 1.1e-36 156.8 126 58.7
TAR625G0611 Trochodendron aralioides HOM05D007770 ORTHO05D009827 1.1e-34 150.2 116 62.9
Thhalv10000372m.g Eutrema salsugineum HOM05D007770 ORTHO05D009827 1.8e-34 149.4 127 55.9
Lj1g0002810 Lotus japonicus HOM05D007770 ORTHO05D009827 4.0e-34 148.3 87 75.9
Dinv13246 Davidia involucrata HOM05D007770 ORTHO05D009827 1.5e-33 146.4 93 71.0
Aa31sc132G30 Aethionema arabicum HOM05D007770 ORTHO05D009827 2.6e-33 145.6 136 52.2
FvH4_2g36440 Fragaria vesca HOM05D007770 ORTHO05D009827 4.4e-33 144.8 125 57.6
Potri.006G278250 Populus trichocarpa HOM05D007770 ORTHO05D009827 7.6e-33 144.1 128 64.1
FAN27G1234 Fragaria x ananassa HOM05D007770 ORTHO05D009827 9.9e-33 143.7 125 57.6
AT2G24395 Arabidopsis thaliana HOM05D007770 ORTHO05D009827 1.3e-32 143.3 129 51.2
Thecc.09G003100 Theobroma cacao HOM05D007770 ORTHO05D009827 1.3e-32 143.3 123 61.0
CARHR117660 Cardamine hirsuta HOM05D007770 ORTHO05D009827 2.2e-32 142.5 131 52.7
Phvul.009G103700 Phaseolus vulgaris HOM05D007770 ORTHO05D009827 2.2e-32 142.5 86 68.6
MD08G1124100 Malus domestica HOM05D007770 ORTHO05D009827 2.9e-32 142.1 121 55.4
Carub.0004s0375 Capsella rubella HOM05D007770 ORTHO05D009827 3.7e-32 141.7 133 54.9
Gohir.D06G109700 Gossypium hirsutum HOM05D007770 ORTHO05D009827 3.7e-32 141.7 124 58.9
CiPaw.08G021600 Carya illinoinensis HOM05D007770 ORTHO05D009827 6.4e-32 141.0 120 55.8
MSTRG.13938 Avicennia marina HOM05D007770 ORTHO05D009827 8.4e-32 140.6 111 59.5
Gorai.010G124500 Gossypium raimondii HOM05D007770 ORTHO05D009827 8.4e-32 140.6 124 58.9
Nn8g41062 Nelumbo nucifera HOM05D007770 ORTHO05D009827 2.4e-31 139.0 115 56.5
Atru.chr7.2683 Acer truncatum HOM05D007770 ORTHO05D009827 7.1e-31 137.5 118 51.7
QL12p025908 Quercus lobata HOM05D007770 ORTHO05D009827 9.2e-31 137.1 128 53.1
Sp4g03420 Schrenkiella parvula HOM05D007770 ORTHO05D009827 1.6e-30 136.3 130 50.0
GSVIVG01035563001 Vitis vinifera HOM05D007770 ORTHO05D009827 1.6e-30 136.3 88 72.7
AL4G14830 Arabidopsis lyrata HOM05D007770 ORTHO05D009827 2.7e-30 135.6 129 50.4
Sabra06G0215900 Salix brachista HOM05D007770 ORTHO05D009827 2.7e-30 135.6 128 58.6
Lsat_1_v5_gn_3_26540 Lactuca sativa HOM05D007770 ORTHO05D009827 3.5e-30 135.2 91 63.7
VMungo1309G0540 Vigna mungo HOM05D007770 ORTHO05D009827 4.6e-30 134.8 110 54.5
Eucgr.C04242 Eucalyptus grandis HOM05D007770 ORTHO05D009827 1.0e-29 133.7 125 52.8
TWI34G0832 Tripterygium wilfordii HOM05D007770 ORTHO05D009827 1.0e-29 133.7 119 58.0
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 3.9e-29 131.7 74 74.3
PSO063G4434 Papaver somniferum HOM05D007770 ORTHO05D009827 5.1e-29 131.3 92 60.9
Ciclev10010266m.g Citrus clementina HOM05D007770 ORTHO05D009827 6.6e-29 131.0 85 67.1
FAN20G1378 Fragaria x ananassa HOM05D007770 ORTHO05D009827 1.5e-28 129.8 125 56.8
Prupe.1G455800 Prunus persica HOM05D007770 ORTHO05D009827 1.9e-28 129.4 121 55.4
arahy.Tifrunner.gnm1.ann1.SE3NL1 Arachis hypogaea HOM05D007770 ORTHO05D009827 4.3e-28 128.3 123 52.8
arahy.Tifrunner.gnm1.ann1.DWH8JW Arachis hypogaea HOM05D007770 ORTHO05D009827 7.3e-28 127.5 117 54.7
ECA246G2424 Erigeron canadensis HOM05D007770 ORTHO05D009827 9.6e-28 127.1 97 59.8
CANSAT56G0680 Cannabis sativa HOM05D007770 ORTHO05D009827 1.6e-27 126.3 70 70.0
HanXRQChr17g0539271 Helianthus annuus HOM05D007770 ORTHO05D009827 2.1e-27 125.9 87 69.0
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 3.6e-27 125.2 74 74.3
Aqoxy7G02675 Aquilegia oxysepala HOM05D007770 ORTHO05D009827 6.2e-27 124.4 95 56.8
BcaC02g08464 Brassica carinata HOM05D007770 ORTHO05D009827 6.2e-27 124.4 134 51.5
Cc08_g05750 Coffea canephora HOM05D007770 ORTHO05D009827 6.2e-27 124.4 69 73.9
BolC4t26952H Brassica oleracea HOM05D007770 ORTHO05D009827 1.1e-26 123.6 134 52.2
A04p18710 Brassica napus HOM05D007770 ORTHO05D009827 2.4e-26 122.5 133 50.4
TPR.G12312 Trifolium pratense HOM05D007770 ORTHO05D009827 2.4e-26 122.5 72 65.3
Medtr3g109170 Medicago truncatula HOM05D007770 ORTHO05D009827 4.0e-26 121.7 101 51.5
Migut.E01418 Erythranthe guttata HOM05D007770 ORTHO05D009827 8.9e-26 120.6 89 58.4
Glyma.04G077900 Glycine max HOM05D007770 ORTHO05D009827 1.2e-25 120.2 66 75.8
Gohir.A06G107400 Gossypium hirsutum HOM05D007770 ORTHO05D009827 1.2e-25 120.2 99 59.6
Psat5g024680 Pisum sativum HOM05D007770 ORTHO05D009827 2.0e-25 119.4 118 47.5
Nitab4.5_0001942g0170 Nicotiana tabacum HOM05D007770 ORTHO05D009827 3.4e-25 118.6 89 64.0
C04p54000 Brassica napus HOM05D007770 ORTHO05D009827 5.8e-25 117.9 132 50.8
BraA04t17481Z Brassica rapa HOM05D007770 ORTHO05D009827 5.8e-25 117.9 132 48.5
DCAR_000666 Daucus carota HOM05D007770 ORTHO05D009827 3.8e-24 115.2 121 54.5
Sopen08g022850 Solanum pennellii HOM05D007770 ORTHO05D009827 1.9e-23 112.8 89 62.9
PGSC0003DMG400029583 Solanum tuberosum HOM05D007770 ORTHO05D009827 1.9e-23 112.8 89 61.8
Solyc08g069230.3 Solanum lycopersicum HOM05D007770 ORTHO05D009827 2.4e-23 112.5 89 61.8
RcHm_v2.0_Chr6g0305461 Rosa chinensis HOM05D007770 ORTHO05D009827 7.1e-23 110.9 114 53.5
CAN.G480.16 Capsicum annuum HOM05D007770 ORTHO05D009827 9.3e-23 110.5 89 61.8
arahy.Tifrunner.gnm1.ann1.T2QDAL Arachis hypogaea HOM05D007770 ORTHO05D009827 1.2e-22 110.2 81 59.3
CDE02G4318 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 2.1e-22 109.4 83 62.7
HPP92_017098 Vanilla planifolia HOM05D007770 ORTHO05D009827 4.6e-22 108.2 76 56.6
CDE06G0935 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 1.1e-20 103.6 90 57.8
MELO3C011169.2 Cucumis melo HOM05D007770 ORTHO05D009827 2.5e-20 102.4 69 63.8
FAN15G1940 Fragaria x ananassa HOM05D007770 ORTHO05D009827 3.3e-20 102.1 104 51.0
ClCG08G012500 Citrullus lanatus HOM05D007770 ORTHO05D009827 4.3e-20 101.7 102 52.0
Pp3c27_7640 Physcomitrium patens HOM05D007770 ORTHO05D009827 5.6e-20 101.3 74 59.5
Sed0000657 Sechium edule HOM05D007770 ORTHO05D009827 1.3e-19 100.1 97 52.6
CANSAT56G1809 Cannabis sativa HOM05D007770 ORTHO05D009827 2.1e-19 99.4 66 63.6
Lalb_Chr23g0269281 Lupinus albus HOM05D007770 ORTHO05D009827 8.1e-19 97.4 92 56.5
EL10Ac2g03698 Beta vulgaris HOM05D007770 ORTHO05D009827 1.1e-18 97.1 64 62.5
Nitab4.5_0000970g0130 Nicotiana tabacum HOM05D007770 ORTHO05D009827 1.4e-18 96.7 70 62.9
SalBow8G5425 Salvia bowleyana HOM05D007770 ORTHO05D009827 1.4e-18 96.7 102 49.0
CsaV3_2G031200 Cucumis sativus L. HOM05D007770 ORTHO05D009827 6.9e-18 94.4 97 49.5
unitig_747.g21378 Utricularia gibba HOM05D007770 ORTHO05D009827 1.3e-16 90.1 93 38.7
AagrBONN_evm.TU.Sc2ySwM_228.4990 Anthoceros agrestis HOM05D007770 ORTHO05D009827 4.9e-16 88.2 76 52.6
MD15G1102800 Malus domestica HOM05D007770 ORTHO05D009827 4.9e-16 88.2 103 43.7
CBR_g3948 Chara braunii HOM05D007770 ORTHO05D009827 1.9e-15 86.3 66 53.0
Mapoly0035s0047 Marchantia polymorpha HOM05D007770 ORTHO05D009827 3.5e-14 82.0 65 50.8
Actinidia25745 Actinidia chinensis HOM05D007770 ORTHO05D009827 6.0e-14 81.3 45 75.6
HPP92_017108 Vanilla planifolia HOM05D007770 ORTHO05D009827 1.7e-13 79.7 57 54.4
Os08g0520850 Oryza sativa ssp. japonica HOM05D007770 ORTHO05D009827 3.9e-13 78.6 43 67.4
Zm00001eb035580 Zea mays HOM05D007770 ORTHO05D009827 4.3e-12 75.1 122 35.2
Glyma.06G079000 Glycine max HOM05D007770 ORTHO05D009827 3.4e-09 65.5 49 57.1
MD08G1226400 Malus domestica HOM05D007770 ORTHO05D009827 2.2e-08 62.8 36 72.2


User provided reference genes

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