Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 3.4e-270 934.5 496 100.0
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 2.2e-208 729.2 497 78.3
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 5.7e-201 704.5 493 76.3
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 4.5e-198 694.9 493 74.2
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 1.3e-197 693.3 500 75.4
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 1.9e-196 689.5 500 74.6
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 4.0e-194 681.8 496 73.2
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 4.0e-194 681.8 496 72.0
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 1.5e-193 679.9 498 72.3
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 1.6e-190 669.8 510 71.4
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 2.7e-190 669.1 494 71.7
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 2.7e-190 669.1 497 73.0
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 3.8e-189 665.2 499 71.7
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 8.5e-189 664.1 500 71.6
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 3.2e-188 662.1 496 71.0
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 3.2e-188 662.1 497 73.2
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 9.5e-188 660.6 497 72.2
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 9.5e-188 660.6 497 72.2
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 2.7e-187 659.1 496 70.4
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 8.0e-187 657.5 497 71.2
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 1.8e-186 656.4 500 69.8
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 6.8e-186 654.4 497 70.2
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 4.4e-185 651.7 502 71.1
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 1.7e-184 649.8 501 70.1
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 1.1e-183 647.1 497 70.8
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 4.1e-183 645.2 494 70.9
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 7.0e-183 644.4 494 69.6
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 7.0e-183 644.4 489 72.2
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 2.0e-182 642.9 497 70.2
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 2.7e-182 642.5 499 70.1
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 3.5e-182 642.1 498 69.1
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 7.7e-182 641.0 501 70.1
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 1.0e-181 640.6 522 68.2
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 8.6e-181 637.5 495 69.9
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 4.3e-180 635.2 499 69.5
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 2.1e-179 632.9 498 68.1
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 1.8e-178 629.8 499 68.9
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 5.2e-178 628.2 497 68.6
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 7.5e-177 624.4 495 68.1
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 2.2e-176 622.9 494 67.4
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 4.1e-175 618.6 497 65.0
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 1.0e-173 614.0 499 67.9
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 1.7e-173 613.2 500 68.4
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 3.9e-173 612.1 497 65.0
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 1.9e-172 609.8 499 68.3
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 1.2e-171 607.1 498 66.5
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 4.7e-171 605.1 497 67.0
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 1.2e-169 600.5 516 66.9
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 2.6e-169 599.4 505 66.1
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 3.4e-169 599.0 499 65.9
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 9.8e-169 597.4 516 64.9
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 1.7e-168 596.7 493 65.1
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 2.2e-168 596.3 496 65.1
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 4.1e-167 592.0 518 64.9
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 9.2e-167 590.9 505 65.5
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 1.2e-166 590.5 499 64.7
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 2.0e-166 589.7 499 66.9
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 1.3e-165 587.0 500 63.4
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 1.9e-164 583.2 521 63.0
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 1.1e-162 577.4 550 60.9
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 3.7e-160 568.9 497 61.4
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 6.4e-160 568.2 509 62.9
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 4.1e-159 565.5 506 61.3
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 7.1e-159 564.7 512 60.9
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 1.0e-157 560.8 515 61.7
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 2.3e-157 559.7 508 61.6
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 9.5e-156 554.3 504 62.7
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 2.8e-155 552.7 510 60.6
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 3.6e-155 552.4 511 62.0
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 6.2e-155 551.6 517 60.0
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 2.6e-153 546.2 504 63.1
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 3.4e-153 545.8 517 61.1
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 2.9e-152 542.7 515 59.8
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 4.9e-152 542.0 516 59.1
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 6.4e-152 541.6 525 60.6
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 1.1e-151 540.8 508 59.8
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 1.4e-151 540.4 508 60.8
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 4.1e-151 538.9 507 61.1
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 2.7e-150 536.2 497 60.4
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 3.0e-149 532.7 405 65.9
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 2.4e-146 523.1 538 58.2
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 2.0e-145 520.0 509 59.1
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 6.4e-144 515.0 509 58.3
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 7.1e-143 511.5 508 58.9
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 9.3e-143 511.1 507 59.2
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 1.5e-140 503.8 508 55.9
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 4.3e-140 502.3 494 59.7
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 1.3e-139 500.7 495 59.0
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 1.4e-138 497.3 510 57.8
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 4.0e-138 495.7 510 57.6
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 7.9e-134 481.5 359 74.1
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 6.2e-131 471.9 499 56.1
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 6.2e-131 471.9 345 69.9
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 1.8e-130 470.3 364 73.1
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 2.6e-129 466.5 514 53.5
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 2.8e-115 419.9 331 69.2
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 3.8e-112 409.5 517 47.0
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 1.3e-107 394.4 521 46.4
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 1.4e-103 380.9 741 37.9
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 7.2e-103 378.6 498 49.0
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 6.5e-96 355.5 353 61.5
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 6.3e-75 285.8 189 74.1
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 8.3e-67 258.8 359 46.0
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 8.0e-62 242.3 563 36.2
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 1.2e-49 201.8 191 60.7
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 6.0e-41 172.9 146 59.6
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 5.8e-36 156.4 311 40.8
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 1.5e-28 131.7 108 59.3
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 9.9e-28 129.0 330 37.6
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 5.3e-21 106.7 150 43.3
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 2.8e-06 57.8 77 41.6
TAR636G2565 Trochodendron aralioides HOM05D007019 ORTHO05D008398 2.8e-06 57.8 43 76.7
Actinidia04251 Actinidia chinensis HOM05D004574 ORTHO05D005612 3.7e-06 57.4 74 45.9
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 3.7e-06 57.4 69 42.0
Lsat_1_v5_gn_5_90461 Lactuca sativa HOM05D004574 ORTHO05D005612 4.8e-06 57.0 49 53.1


User provided reference genes

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