Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 3.0e-79 298.5 158 100.0
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 2.2e-58 229.2 157 73.2
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 6.5e-58 227.6 159 73.6
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 1.5e-57 226.5 159 73.0
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 1.9e-57 226.1 162 74.1
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 1.9e-57 226.1 159 74.2
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 1.6e-56 223.0 159 71.1
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 4.7e-56 221.5 157 74.5
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 8.0e-56 220.7 158 71.5
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 1.8e-55 219.5 161 70.2
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 1.8e-55 219.5 159 71.1
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 2.0e-54 216.1 159 73.0
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 5.7e-54 214.5 155 67.7
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 9.7e-54 213.8 153 70.6
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 2.8e-53 212.2 156 70.5
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 3.7e-53 211.8 159 67.9
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 6.3e-53 211.1 158 64.6
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 1.1e-52 210.3 155 68.4
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 3.1e-52 208.8 153 66.0
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 5.3e-52 208.0 154 70.1
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 5.3e-52 208.0 146 70.5
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 5.3e-52 208.0 169 65.7
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 7.0e-52 207.6 155 67.1
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 1.2e-51 206.8 158 63.3
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 2.0e-51 206.1 158 63.3
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 2.7e-51 205.7 183 62.3
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 1.7e-50 203.0 148 67.6
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 5.0e-50 201.4 160 65.6
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 2.5e-49 199.1 156 64.7
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 4.2e-49 198.4 163 62.0
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 5.5e-49 198.0 135 70.4
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 7.2e-49 197.6 157 64.3
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 9.4e-49 197.2 153 66.0
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 9.4e-49 197.2 147 68.7
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 9.4e-49 197.2 159 66.7
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 9.4e-49 197.2 147 70.1
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 1.2e-48 196.8 155 63.9
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 1.6e-48 196.4 155 62.6
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 1.6e-48 196.4 159 62.9
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 4.7e-48 194.9 159 62.9
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 1.4e-47 193.4 146 65.1
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 3.0e-47 192.2 157 61.8
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 4.0e-47 191.8 133 72.2
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 4.0e-47 191.8 157 58.6
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 5.2e-47 191.4 133 71.4
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 5.2e-47 191.4 146 63.7
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 6.8e-47 191.0 159 61.6
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 8.8e-47 190.7 159 61.6
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 1.5e-46 189.9 146 64.4
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 1.5e-46 189.9 154 60.4
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 1.5e-46 189.9 150 62.0
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 2.0e-46 189.5 152 60.5
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 2.6e-46 189.1 157 60.5
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 3.4e-46 188.7 159 62.3
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 5.7e-46 188.0 159 61.0
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 5.7e-46 188.0 149 65.1
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 9.8e-46 187.2 159 62.3
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 9.8e-46 187.2 159 62.3
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 1.3e-45 186.8 155 61.3
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 1.3e-45 186.8 155 61.3
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 1.3e-45 186.8 155 61.3
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 1.3e-45 186.8 156 64.7
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 1.3e-45 186.8 137 68.6
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 3.7e-45 185.3 177 57.6
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 3.7e-45 185.3 155 63.2
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 4.8e-45 184.9 159 61.6
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 4.8e-45 184.9 159 62.3
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 8.3e-45 184.1 191 56.0
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 1.4e-44 183.3 143 65.7
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 1.4e-44 183.3 158 58.9
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 1.4e-44 183.3 159 61.0
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 3.1e-44 182.2 155 62.6
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 3.1e-44 182.2 146 63.0
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 4.1e-44 181.8 147 63.9
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.6e-43 179.9 121 71.9
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 5.9e-43 177.9 136 62.5
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 1.0e-42 177.2 143 62.9
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 2.2e-42 176.0 135 64.4
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 2.9e-42 175.6 159 59.1
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 3.8e-42 175.3 147 58.5
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 5.0e-42 174.9 168 57.1
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 2.5e-41 172.6 147 61.2
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 2.5e-41 172.6 147 61.2
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 7.2e-41 171.0 145 60.7
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 9.5e-41 170.6 121 71.1
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 8.8e-39 164.1 112 73.2
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 1.5e-38 163.3 147 57.8
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 5.7e-38 161.4 109 73.4
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 1.8e-36 156.4 122 63.1
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 3.1e-36 155.6 158 53.2
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 7.0e-36 154.5 126 62.7
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 2.7e-35 152.5 109 67.9
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 2.7e-35 152.5 107 69.2
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 5.9e-35 151.4 162 55.6
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 1.0e-34 150.6 109 68.8
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 1.0e-31 140.6 112 59.8
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 8.9e-31 137.5 110 63.6
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 1.5e-25 120.2 84 70.2
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 1.9e-25 119.8 141 44.0
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 7.3e-25 117.9 80 77.5
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 5.2e-23 111.7 89 66.3
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 8.9e-23 110.9 83 67.5
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 2.6e-22 109.4 74 70.3
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 9.8e-22 107.5 127 43.3
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 4.9e-21 105.1 132 43.9
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 4.9e-21 105.1 80 66.2
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 6.4e-21 104.8 142 37.3
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 3.2e-20 102.4 133 40.6
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 9.2e-20 100.9 142 38.0
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 1.6e-19 100.1 75 61.3
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 1.1e-17 94.0 70 64.3
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 1.9e-17 93.2 81 56.8
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 6.4e-13 78.2 98 41.8
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 1.7e-10 70.1 61 60.7
Ca_13745_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 2.8e-08 62.8 57 57.9
CAN.G285.15 Capsicum annuum HOM05D006886 ORTHO05D008494 6.2e-08 61.6 60 51.7


User provided reference genes

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