Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G119800 Manihot esculenta HOM05D008288 ORTHO05D010469 1.6e-129 466.5 308 100.0
Potri.006G251000 Populus trichocarpa HOM05D008288 ORTHO05D010469 1.6e-92 343.6 307 62.5
Actinidia22367 Actinidia chinensis HOM05D008288 ORTHO05D010469 3.1e-88 329.3 300 60.3
Thecc.09G149300 Theobroma cacao HOM05D008288 ORTHO05D010469 1.5e-87 327.0 306 60.8
CSS0049569 Camellia sinensis var. sinensis HOM05D008288 ORTHO05D010469 1.0e-86 324.3 303 59.4
Gohir.D05G048766 Gossypium hirsutum HOM05D008288 ORTHO05D010469 6.5e-86 321.6 307 61.2
Gorai.009G050100 Gossypium raimondii HOM05D008288 ORTHO05D010469 8.4e-86 321.2 307 60.9
Duzib150G0406 Durio zibethinus HOM05D008288 ORTHO05D010469 1.9e-85 320.1 298 61.1
Gohir.A05G047000 Gossypium hirsutum HOM05D008288 ORTHO05D010469 5.5e-85 318.5 307 60.6
COL.COLO4_23981 Corchorus olitorius HOM05D008288 ORTHO05D010469 3.0e-83 312.8 304 59.9
Atru.chr7.2381 Acer truncatum HOM05D008288 ORTHO05D010469 1.1e-82 310.8 306 57.5
Hma1.2p1_0000F.1_g000730 Hydrangea macrophylla HOM05D008288 ORTHO05D010469 2.5e-82 309.7 303 58.4
MD15G1120900 Malus domestica HOM05D008288 ORTHO05D010469 2.2e-81 306.6 301 57.8
RcHm_v2.0_Chr6g0298581 Rosa chinensis HOM05D008288 ORTHO05D010469 6.9e-80 301.6 306 56.5
FAN15G2470 Fragaria x ananassa HOM05D008288 ORTHO05D010469 1.2e-79 300.8 306 56.2
FvH4_2g29591 Fragaria vesca HOM05D008288 ORTHO05D010469 3.4e-79 299.3 306 56.2
Peaxi162Scf00341g00011 Petunia axillaris HOM05D008288 ORTHO05D010469 3.4e-79 299.3 294 59.5
FAN27G1450 Fragaria x ananassa HOM05D008288 ORTHO05D010469 1.3e-78 297.4 306 55.6
Ciclev10010324m.g Citrus clementina HOM05D008288 ORTHO05D010469 2.9e-78 296.2 301 56.8
Nitab4.5_0015147g0010 Nicotiana tabacum HOM05D008288 ORTHO05D010469 5.5e-77 292.0 288 59.4
MD08G1145200 Malus domestica HOM05D008288 ORTHO05D010469 1.2e-76 290.8 299 55.5
TAR625G1133 Trochodendron aralioides HOM05D008288 ORTHO05D010469 1.6e-76 290.4 305 56.1
TWI34G1005 Tripterygium wilfordii HOM05D008288 ORTHO05D010469 7.9e-76 288.1 286 57.7
QL02p022482 Quercus lobata HOM05D008288 ORTHO05D010469 2.3e-75 286.6 290 58.6
Aqoxy7G02071 Aquilegia oxysepala HOM05D008288 ORTHO05D010469 8.8e-75 284.6 306 54.9
Sopen08g021110 Solanum pennellii HOM05D008288 ORTHO05D010469 1.1e-74 284.3 304 55.3
Prupe.1G473500 Prunus persica HOM05D008288 ORTHO05D010469 7.4e-74 281.6 315 53.0
Solyc08g067170.3 Solanum lycopersicum HOM05D008288 ORTHO05D010469 9.7e-74 281.2 304 54.9
ClCG05G017080 Citrullus lanatus HOM05D008288 ORTHO05D010469 8.2e-73 278.1 308 51.6
PGR031G1353 Punica granatum HOM05D008288 ORTHO05D010469 1.2e-71 274.2 301 53.2
MBI04_g10412_MAGBIO Magnolia biondii HOM05D008288 ORTHO05D010469 2.0e-71 273.5 304 52.0
CsaV3_3G046560 Cucumis sativus L. HOM05D008288 ORTHO05D010469 2.6e-71 273.1 306 51.0
Phvul.009G095100 Phaseolus vulgaris HOM05D008288 ORTHO05D010469 1.7e-70 270.4 292 54.5
Sed0020459 Sechium edule HOM05D008288 ORTHO05D010469 6.5e-70 268.5 308 51.0
Cpa.g.sc91.46 Carica papaya HOM05D008288 ORTHO05D010469 8.5e-70 268.1 282 57.8
VMungo1309G1559 Vigna mungo HOM05D008288 ORTHO05D010469 8.5e-70 268.1 292 53.1
Nitab4.5_0000151g0060 Nicotiana tabacum HOM05D008288 ORTHO05D010469 1.1e-69 267.7 268 58.6
Dinv30173 Davidia involucrata HOM05D008288 ORTHO05D010469 3.2e-69 266.2 301 66.1
Haze_21560 Corylus avellana HOM05D008288 ORTHO05D010469 7.2e-69 265.0 296 56.4
Eucgr.C01784 Eucalyptus grandis HOM05D008288 ORTHO05D010469 1.6e-68 263.8 306 52.0
Psat0ss3186g0240 Pisum sativum HOM05D008288 ORTHO05D010469 1.6e-68 263.8 299 52.2
CAN.G348.1 Capsicum annuum HOM05D008288 ORTHO05D010469 2.7e-68 263.1 309 52.4
DCAR_007695 Daucus carota HOM05D008288 ORTHO05D010469 3.9e-67 259.2 272 55.5
Ca_15724_v3 Cicer arietinum L. HOM05D008288 ORTHO05D010469 2.0e-66 256.9 295 51.5
Medtr3g107650 Medicago truncatula HOM05D008288 ORTHO05D010469 2.8e-65 253.1 296 50.0
TPR.G31773 Trifolium pratense HOM05D008288 ORTHO05D010469 4.8e-65 252.3 297 51.2
Migut.A00319 Erythranthe guttata HOM05D008288 ORTHO05D010469 3.8e-62 242.7 293 49.5
SalBow4G3001 Salvia bowleyana HOM05D008288 ORTHO05D010469 4.2e-61 239.2 290 48.3
Dinv11620 Davidia involucrata HOM05D008288 ORTHO05D010469 3.9e-59 232.6 152 77.0
PSO455G0067 Papaver somniferum HOM05D008288 ORTHO05D010469 1.5e-53 214.2 314 43.6
MELO3C003683.2 Cucumis melo HOM05D008288 ORTHO05D010469 8.0e-52 208.4 306 43.5
PSO170G5425 Papaver somniferum HOM05D008288 ORTHO05D010469 1.4e-51 207.6 314 43.6
Glyma.04G068600 Glycine max HOM05D008288 ORTHO05D010469 3.7e-49 199.5 235 51.1
CANSAT54G0155 Cannabis sativa HOM05D008288 ORTHO05D010469 1.0e-46 191.4 144 68.8
Lj1g0026401 Lotus japonicus HOM05D008288 ORTHO05D010469 4.2e-45 186.0 247 47.0
Cfa013175 Carpinus fangiana HOM05D008288 ORTHO05D010469 5.0e-38 162.5 217 50.7
ATR0815G056 Amborella trichopoda HOM05D008288 ORTHO05D010469 2.4e-32 143.7 267 45.3
Lsat_1_v5_gn_1_45101 Lactuca sativa HOM05D008288 ORTHO05D010469 5.9e-31 139.0 201 44.8
Solyc08g069220.2 Solanum lycopersicum HOM05D008288 ORTHO05D010469 5.4e-24 115.9 271 33.6
Sopen08g022840 Solanum pennellii HOM05D008288 ORTHO05D010469 2.2e-17 94.0 81 59.3
SEGI_16453 Sequoiadendron giganteum HOM05D008288 ORTHO05D010469 3.0e-14 83.6 280 37.5
Lalb_Chr10g0105221 Lupinus albus HOM05D000215 ORTHO05D008904 2.3e-06 57.4 268 26.5


User provided reference genes

Program Settings