Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G117700 Manihot esculenta HOM05D007454 ORTHO05D009382 3.0e-81 305.1 150 100.0
Manes.03G018900 Manihot esculenta HOM05D007454 ORTHO05D009382 1.4e-46 189.9 153 64.1
Sabra06G0194300 Salix brachista HOM05D007454 ORTHO05D009382 2.3e-36 156.0 153 56.2
Potri.006G248300 Populus trichocarpa HOM05D007454 ORTHO05D009382 1.1e-35 153.7 153 57.5
Thecc.09G146500 Theobroma cacao HOM05D007454 ORTHO05D009382 2.5e-35 152.5 150 54.7
CSS0001844 Camellia sinensis var. sinensis HOM05D007454 ORTHO05D009382 2.1e-34 149.4 153 52.9
Actinidia29311 Actinidia chinensis HOM05D007454 ORTHO05D009382 4.0e-33 145.2 153 54.2
Actinidia13275 Actinidia chinensis HOM05D007454 ORTHO05D009382 4.5e-32 141.7 152 53.9
Gorai.007G350400 Gossypium raimondii HOM05D007454 ORTHO05D009382 1.3e-31 140.2 150 48.0
Gohir.D11G320200 Gossypium hirsutum HOM05D007454 ORTHO05D009382 6.4e-31 137.9 150 49.3
Nitab4.5_0003201g0010 Nicotiana tabacum HOM05D007454 ORTHO05D009382 1.9e-30 136.3 154 49.4
Gohir.A11G304800 Gossypium hirsutum HOM05D007454 ORTHO05D009382 3.2e-30 135.6 150 47.3
Rhsim02G0189300 Rhododendron simsii HOM05D007454 ORTHO05D009382 7.1e-30 134.4 155 46.5
Nitab4.5_0000125g0360 Nicotiana tabacum HOM05D007454 ORTHO05D009382 2.7e-29 132.5 154 48.7
QL12p031592 Quercus lobata HOM05D007454 ORTHO05D009382 2.7e-29 132.5 158 46.2
Atru.chr7.2345 Acer truncatum HOM05D007454 ORTHO05D009382 3.5e-29 132.1 158 50.6
Nn2g11862 Nelumbo nucifera HOM05D007454 ORTHO05D009382 7.9e-29 131.0 160 45.0
TAR383G0100 Trochodendron aralioides HOM05D007454 ORTHO05D009382 1.3e-28 130.2 155 47.1
Solyc08g067630.3 Solanum lycopersicum HOM05D007454 ORTHO05D009382 1.8e-28 129.8 158 46.8
Duzib150G0674 Durio zibethinus HOM05D007454 ORTHO05D009382 1.1e-27 127.1 114 53.5
COL.COLO4_24027 Corchorus olitorius HOM05D007454 ORTHO05D009382 1.5e-27 126.7 150 48.7
FAN15G1931 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.9e-27 126.3 156 48.1
CAN.G506.13 Capsicum annuum HOM05D007454 ORTHO05D009382 2.5e-27 125.9 154 45.5
PGSC0003DMG400002261 Solanum tuberosum HOM05D007454 ORTHO05D009382 5.6e-27 124.8 156 46.8
Oeu032495.1 Olea europaea HOM05D007454 ORTHO05D009382 9.6e-27 124.0 153 47.7
TAR626G1515 Trochodendron aralioides HOM05D007454 ORTHO05D009382 9.6e-27 124.0 151 45.7
Dinv11595 Davidia involucrata HOM05D007454 ORTHO05D009382 1.3e-26 123.6 114 57.0
Haze_21608 Corylus avellana HOM05D007454 ORTHO05D009382 1.6e-26 123.2 154 48.7
MD15G1117600 Malus domestica HOM05D007454 ORTHO05D009382 1.6e-26 123.2 157 44.6
TWI34G0809 Tripterygium wilfordii HOM05D007454 ORTHO05D009382 2.8e-26 122.5 159 43.4
FAN27G1093 Fragaria x ananassa HOM05D007454 ORTHO05D009382 6.2e-26 121.3 157 47.8
Cfa013203 Carpinus fangiana HOM05D007454 ORTHO05D009382 8.2e-26 120.9 155 48.4
FAN20G1122 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.4e-25 120.2 151 47.7
RcHm_v2.0_Chr6g0298931 Rosa chinensis HOM05D007454 ORTHO05D009382 1.4e-25 120.2 161 49.7
Cc11_g01380 Coffea canephora HOM05D007454 ORTHO05D009382 1.8e-25 119.8 160 43.8
FvH4_2g29860 Fragaria vesca HOM05D007454 ORTHO05D009382 2.4e-25 119.4 157 47.1
FAN24G1693 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.5e-24 116.7 157 45.9
CiPaw.08G014500 Carya illinoinensis HOM05D007454 ORTHO05D009382 3.4e-24 115.5 167 41.3
CiPaw.07G219000 Carya illinoinensis HOM05D007454 ORTHO05D009382 4.5e-24 115.2 163 42.9
ECA248G0251 Erigeron canadensis HOM05D007454 ORTHO05D009382 4.5e-24 115.2 153 41.8
Prupe.1G471000 Prunus persica HOM05D007454 ORTHO05D009382 4.9e-23 111.7 154 46.8
Lsat_1_v5_gn_1_45380 Lactuca sativa HOM05D007454 ORTHO05D009382 1.1e-22 110.5 151 43.7
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 1.9e-22 109.8 155 44.5
Ciclev10009811m.g Citrus clementina HOM05D007454 ORTHO05D009382 2.5e-22 109.4 154 42.2
DCAR_001472 Daucus carota HOM05D007454 ORTHO05D009382 9.3e-22 107.5 154 43.5
HanXRQChr01g0030031 Helianthus annuus HOM05D007454 ORTHO05D009382 1.6e-21 106.7 154 40.9
MD08G1140700 Malus domestica HOM05D007454 ORTHO05D009382 8.7e-20 100.9 156 41.7
Sopen08g021580 Solanum pennellii HOM05D007454 ORTHO05D009382 1.5e-19 100.1 108 50.9
Hund25693 Selenicereus undatus HOM05D007454 ORTHO05D009382 3.3e-19 99.0 168 41.7
EL10Ac2g02557 Beta vulgaris HOM05D007454 ORTHO05D009382 9.7e-19 97.4 163 40.5
unitig_748.g8205 Utricularia gibba HOM05D007454 ORTHO05D009382 1.3e-18 97.1 155 40.6
Aqoxy7G01923 Aquilegia oxysepala HOM05D007454 ORTHO05D009382 2.8e-18 95.9 131 42.7
Glyma.06G072000 Glycine max HOM05D007454 ORTHO05D009382 3.7e-18 95.5 153 43.1
Cpa.g.sc603.1 Carica papaya HOM05D007454 ORTHO05D009382 6.3e-18 94.7 139 38.8
Sed0012550 Sechium edule HOM05D007454 ORTHO05D009382 1.4e-17 93.6 154 39.6
Eucgr.C01807 Eucalyptus grandis HOM05D007454 ORTHO05D009382 2.4e-17 92.8 157 38.9
ClCG05G017140 Citrullus lanatus HOM05D007454 ORTHO05D009382 4.1e-17 92.0 152 40.8
Glyma.04G070000 Glycine max HOM05D007454 ORTHO05D009382 9.0e-17 90.9 156 42.3
ClCG08G012990 Citrullus lanatus HOM05D007454 ORTHO05D009382 1.2e-16 90.5 153 39.9
MELO3C003676.2 Cucumis melo HOM05D007454 ORTHO05D009382 4.5e-16 88.6 162 42.6
CsaV3_2G031720 Cucumis sativus L. HOM05D007454 ORTHO05D009382 4.5e-16 88.6 137 40.9
Sed0003243 Sechium edule HOM05D007454 ORTHO05D009382 4.5e-16 88.6 170 34.7
Lj1g0018180 Lotus japonicus HOM05D007454 ORTHO05D009382 1.0e-15 87.4 171 40.4
THA.LOC104803822 Tarenaya hassleriana HOM05D007454 ORTHO05D009382 2.9e-15 85.9 150 38.0
Phvul.009G096400 Phaseolus vulgaris HOM05D007454 ORTHO05D009382 6.5e-15 84.7 152 39.5
MELO3C011223.2 Cucumis melo HOM05D007454 ORTHO05D009382 1.1e-14 84.0 110 41.8
SalBow4G3079 Salvia bowleyana HOM05D007454 ORTHO05D009382 1.1e-14 84.0 64 60.9
arahy.Tifrunner.gnm1.ann1.AC8RV3 Arachis hypogaea HOM05D007454 ORTHO05D009382 3.2e-14 82.4 159 37.7
arahy.Tifrunner.gnm1.ann1.X4UCF1 Arachis hypogaea HOM05D007454 ORTHO05D009382 4.2e-14 82.0 159 38.4
Lalb_Chr23g0268861 Lupinus albus HOM05D007454 ORTHO05D009382 4.2e-14 82.0 162 34.6
VMungo1309G0733 Vigna mungo HOM05D007454 ORTHO05D009382 7.2e-14 81.3 113 39.8
Sc09g0008740 Simmondsia chinensis HOM05D007454 ORTHO05D009382 1.2e-13 80.5 163 35.0
CsaV3_3G046620 Cucumis sativus L. HOM05D007454 ORTHO05D009382 2.7e-13 79.3 160 38.1
Medtr3g107890 Medicago truncatula HOM05D007454 ORTHO05D009382 2.7e-13 79.3 166 38.6
MBI01_g03566_MAGBIO Magnolia biondii HOM05D007454 ORTHO05D009382 3.6e-13 79.0 151 37.7
Zm00001eb296620 Zea mays HOM05D007454 ORTHO05D009382 3.6e-13 79.0 114 36.0
Ca_15708_v3 Cicer arietinum L. HOM05D007454 ORTHO05D009382 2.3e-12 76.3 169 35.5
BcaC02g08336 Brassica carinata HOM05D007454 ORTHO05D009382 5.1e-12 75.1 156 39.1
C04p55570 Brassica napus HOM05D007454 ORTHO05D009382 5.1e-12 75.1 156 39.1
BolC4t27081H Brassica oleracea HOM05D007454 ORTHO05D009382 5.1e-12 75.1 156 39.1
Sp4g05200 Schrenkiella parvula HOM05D007454 ORTHO05D009382 6.7e-12 74.7 157 35.7
Thhalv10000347m.g Eutrema salsugineum HOM05D007454 ORTHO05D009382 8.8e-12 74.3 161 38.5
AT2G25625 Arabidopsis thaliana HOM05D007454 ORTHO05D009382 1.9e-11 73.2 160 35.6
A04p19830 Brassica napus HOM05D007454 ORTHO05D009382 2.5e-11 72.8 156 38.5
PSO170G5517 Papaver somniferum HOM05D007454 ORTHO05D009382 2.5e-11 72.8 122 38.5
AL4G17110 Arabidopsis lyrata HOM05D007454 ORTHO05D009382 3.3e-11 72.4 158 38.0
BraA04t17571Z Brassica rapa HOM05D007454 ORTHO05D009382 3.3e-11 72.4 156 38.5
TPR.G27330 Trifolium pratense HOM05D007454 ORTHO05D009382 3.3e-11 72.4 180 35.0
CARHR115660 Cardamine hirsuta HOM05D007454 ORTHO05D009382 4.3e-11 72.0 161 37.3
CDE07G1568 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 4.3e-11 72.0 127 37.0
CANSAT11G0218 Cannabis sativa HOM05D007454 ORTHO05D009382 5.7e-11 71.6 158 34.2
Carub.0004s0541 Capsella rubella HOM05D007454 ORTHO05D009382 5.7e-11 71.6 151 36.4
BcaB06g28081 Brassica carinata HOM05D007454 ORTHO05D009382 9.7e-11 70.9 156 37.8
PSO017G6963 Papaver somniferum HOM05D007454 ORTHO05D009382 9.7e-11 70.9 122 37.7
Sed0011711 Sechium edule HOM05D007454 ORTHO05D009382 1.3e-10 70.5 135 34.8
CDE06G2386 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 2.8e-10 69.3 122 39.3
Aa31LG1G8530 Aethionema arabicum HOM05D007454 ORTHO05D009382 6.3e-10 68.2 114 40.4
Os05g0575000 Oryza sativa ssp. japonica HOM05D007454 ORTHO05D009382 6.3e-10 68.2 36 77.8
Psat5g027000 Pisum sativum HOM05D007454 ORTHO05D009382 9.1e-09 64.3 65 49.2
TPR.G34694 Trifolium pratense HOM05D007454 ORTHO05D009382 1.0e-07 60.8 37 73.0
CDE06G2168 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 1.7e-07 60.1 35 71.4


User provided reference genes

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