Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G117600 Manihot esculenta HOM05D017842 ORTHO05D020741 1.3e-82 309.7 156 100.0
FAN06G0580 Fragaria x ananassa HOM05D017842 ORTHO05D020741 1.8e-23 113.2 155 36.1
MD08G1133000 Malus domestica HOM05D017842 ORTHO05D020741 4.1e-20 102.1 155 32.3
FAN10G0836 Fragaria x ananassa HOM05D017842 ORTHO05D020741 4.5e-19 98.6 145 37.2
Prupe.1G464100 Prunus persica HOM05D017842 ORTHO05D020741 7.7e-19 97.8 154 33.8
MD15G1111500 Malus domestica HOM05D017842 ORTHO05D020741 1.0e-18 97.4 154 33.8
Prupe.1G469700 Prunus persica HOM05D017842 ORTHO05D020741 2.1e-16 89.7 156 33.3
QL09p011993 Quercus lobata HOM05D015404 ORTHO05D011570 5.2e-15 85.1 152 34.9
Cfa016331 Carpinus fangiana HOM05D015404 ORTHO05D011570 6.3e-13 78.2 156 30.1
CDE10G0521 Ceratophyllum demersum HOM05D003548 ORTHO05D004066 1.6e-11 73.6 87 36.8
CiPaw.11G127100 Carya illinoinensis HOM05D010605 ORTHO05D010031 2.9e-10 69.3 154 29.9
Haze_08723 Corylus avellana HOM05D010605 ORTHO05D010031 6.5e-10 68.2 171 26.3
Haze_08725 Corylus avellana HOM05D010605 ORTHO05D010031 6.5e-10 68.2 171 26.3
RcHm_v2.0_Chr1g0379631 Rosa chinensis HOM05D015404 ORTHO05D011570 8.5e-10 67.8 101 37.6
Actinidia28329 Actinidia chinensis HOM05D010605 ORTHO05D010031 1.1e-09 67.4 86 34.9
CiPaw.05G259800 Carya illinoinensis HOM05D015404 ORTHO05D011570 1.1e-09 67.4 154 29.9
Haze_08721 Corylus avellana HOM05D010605 ORTHO05D010031 1.9e-09 66.6 161 26.1
Haze_16765 Corylus avellana HOM05D015404 ORTHO05D011570 3.2e-09 65.9 85 36.5
Sopen08g021610 Solanum pennellii HOM05D031006 ORTHO05D030675 2.7e-08 62.8 86 33.7
Thecc.03G188800 Theobroma cacao HOM05D015404 ORTHO05D010031 4.7e-08 62.0 91 34.1
CSS0007858 Camellia sinensis var. sinensis HOM05D010605 ORTHO05D010031 6.1e-08 61.6 180 26.7
Cfa012264 Carpinus fangiana HOM05D010605 ORTHO05D010031 8.0e-08 61.2 160 26.2
Cfa012265 Carpinus fangiana HOM05D010605 ORTHO05D010031 1.0e-07 60.8 161 26.1
CiPaw.11G127200 Carya illinoinensis HOM05D010605 ORTHO05D010031 1.0e-07 60.8 154 25.3
QL02p032625 Quercus lobata HOM05D010605 ORTHO05D010031 1.5e-06 57.0 155 26.5
CiPaw.12G087500 Carya illinoinensis HOM05D010605 ORTHO05D010031 2.6e-06 56.2 161 23.6
CiPaw.12G087400 Carya illinoinensis HOM05D010605 ORTHO05D010031 3.3e-06 55.8 161 24.2


User provided reference genes

Program Settings