Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G091700 Manihot esculenta HOM05D005897 ORTHO05D007128 8.3e-114 413.7 204 100.0
Manes.03G043500 Manihot esculenta HOM05D005897 ORTHO05D007128 1.0e-50 204.1 198 62.6
Gohir.D05G036900 Gossypium hirsutum HOM05D005897 ORTHO05D007128 9.7e-38 161.0 197 51.3
Gorai.009G037400 Gossypium raimondii HOM05D005897 ORTHO05D007128 1.3e-37 160.6 197 51.3
Gohir.A05G035400 Gossypium hirsutum HOM05D005897 ORTHO05D007128 6.3e-37 158.3 198 51.0
TWI32G0373 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 3.1e-36 156.0 203 46.3
Haze_26054 Corylus avellana HOM05D005897 ORTHO05D007128 6.9e-36 154.8 208 48.6
COL.COLO4_21221 Corchorus olitorius HOM05D005897 ORTHO05D007128 9.0e-36 154.5 198 46.0
Duzib150G1683 Durio zibethinus HOM05D005897 ORTHO05D007128 3.4e-35 152.5 202 48.5
Thecc.09G071600 Theobroma cacao HOM05D005897 ORTHO05D007128 5.9e-35 151.8 205 49.8
TWI34G1248 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 1.0e-34 151.0 203 46.3
VMungo1309G2633 Vigna mungo HOM05D005897 ORTHO05D007128 5.0e-34 148.7 203 43.8
Gohir.A06G079100 Gossypium hirsutum HOM05D005897 ORTHO05D007128 3.2e-33 146.0 202 46.5
Cfa002951 Carpinus fangiana HOM05D005897 ORTHO05D007128 7.2e-33 144.8 208 47.1
Gohir.D06G078500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 7.2e-33 144.8 198 48.5
Duzib168G1262 Durio zibethinus HOM05D005897 ORTHO05D007128 1.6e-32 143.7 203 47.8
Gorai.010G091500 Gossypium raimondii HOM05D005897 ORTHO05D007128 1.6e-32 143.7 198 48.0
Cpa.g.sc1772.1 Carica papaya HOM05D005897 ORTHO05D007128 3.6e-32 142.5 201 45.3
Thhalv10014753m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 6.1e-32 141.7 205 43.4
Dinv42424 Davidia involucrata HOM05D005897 ORTHO05D007128 1.4e-31 140.6 198 42.4
CiPaw.03G202200 Carya illinoinensis HOM05D005897 ORTHO05D007128 1.1e-30 137.5 201 47.3
QL11p002200 Quercus lobata HOM05D005897 ORTHO05D007128 1.1e-30 137.5 203 42.9
Phvul.009G224300 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 1.5e-30 137.1 200 43.5
Aa31LG4G13050 Aethionema arabicum HOM05D005897 ORTHO05D007128 3.3e-30 136.0 199 43.2
AL6G32310 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 4.3e-30 135.6 232 40.9
BcaB05g22814 Brassica carinata HOM05D005897 ORTHO05D007128 1.7e-29 133.7 203 44.8
Gorai.001G017300 Gossypium raimondii HOM05D005897 ORTHO05D007128 1.7e-29 133.7 197 45.2
Glyma.15G181800 Glycine max HOM05D005897 ORTHO05D007128 3.7e-29 132.5 216 40.3
Sabra06G0107900 Salix brachista HOM05D005897 ORTHO05D007128 3.7e-29 132.5 209 42.6
Gohir.D07G016500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 8.2e-29 131.3 197 44.2
Lj6g0011186 Lotus japonicus HOM05D005897 ORTHO05D007128 1.4e-28 130.6 197 41.1
AT5G20790 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 1.8e-28 130.2 204 43.1
Sp6g23730 Schrenkiella parvula HOM05D005897 ORTHO05D007128 1.8e-28 130.2 202 44.1
A10p19270 Brassica napus HOM05D005897 ORTHO05D007128 2.4e-28 129.8 201 39.3
Gohir.A07G016700 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.4e-28 129.8 195 43.6
Carub.0006s1909 Capsella rubella HOM05D005897 ORTHO05D007128 4.1e-28 129.0 204 45.1
CiPaw.04G140700 Carya illinoinensis HOM05D005897 ORTHO05D007128 4.1e-28 129.0 202 43.1
BraA10t44004Z Brassica rapa HOM05D005897 ORTHO05D007128 9.1e-28 127.9 201 39.3
Medtr2g043710 Medicago truncatula HOM05D005897 ORTHO05D007128 1.2e-27 127.5 203 40.9
A02p06480 Brassica napus HOM05D005897 ORTHO05D007128 1.5e-27 127.1 200 43.0
BraA02t05593Z Brassica rapa HOM05D005897 ORTHO05D007128 1.5e-27 127.1 200 43.0
Nitab4.5_0008755g0010 Nicotiana tabacum HOM05D005897 ORTHO05D007128 2.0e-27 126.7 198 41.4
A03p10250 Brassica napus HOM05D005897 ORTHO05D007128 2.6e-27 126.3 208 42.8
BraA03t10334Z Brassica rapa HOM05D005897 ORTHO05D007128 4.5e-27 125.6 208 43.8
TPR.G4016 Trifolium pratense HOM05D005897 ORTHO05D007128 5.9e-27 125.2 203 38.4
arahy.Tifrunner.gnm1.ann1.K6A74J Arachis hypogaea HOM05D005897 ORTHO05D007128 7.7e-27 124.8 200 42.0
BcaC04g19466 Brassica carinata HOM05D005897 ORTHO05D007128 7.7e-27 124.8 205 41.0
C09p55420 Brassica napus HOM05D005897 ORTHO05D007128 1.0e-26 124.4 205 41.0
BolC9t58404H Brassica oleracea HOM05D005897 ORTHO05D007128 1.0e-26 124.4 205 41.0
BcaC03g13798 Brassica carinata HOM05D005897 ORTHO05D007128 1.3e-26 124.0 198 41.4
BolC2t07071H Brassica oleracea HOM05D005897 ORTHO05D007128 1.3e-26 124.0 198 41.4
FAN26G0251 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.7e-26 123.6 206 39.3
RcHm_v2.0_Chr2g0095761 Rosa chinensis HOM05D005897 ORTHO05D007128 2.2e-26 123.2 197 40.6
FAN23G1701 Fragaria x ananassa HOM05D005897 ORTHO05D007128 3.8e-26 122.5 206 38.8
MD15G1222300 Malus domestica HOM05D005897 ORTHO05D007128 5.0e-26 122.1 198 44.4
Sp5g18750 Schrenkiella parvula HOM05D005897 ORTHO05D007128 5.0e-26 122.1 207 41.5
BcaB01g04771 Brassica carinata HOM05D005897 ORTHO05D007128 6.5e-26 121.7 198 40.9
Prupe.7G193600 Prunus persica HOM05D005897 ORTHO05D007128 8.5e-26 121.3 199 43.7
AL5G21230 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 1.1e-25 120.9 199 41.2
AT3G43110 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 1.1e-25 120.9 199 41.7
BcaB08g36527 Brassica carinata HOM05D005897 ORTHO05D007128 1.1e-25 120.9 201 39.3
Ca_05224_v3 Cicer arietinum L. HOM05D005897 ORTHO05D007128 1.1e-25 120.9 207 40.6
Psat1g137480 Pisum sativum HOM05D005897 ORTHO05D007128 1.1e-25 120.9 201 39.8
Ciclev10009511m.g Citrus clementina HOM05D005897 ORTHO05D007128 1.4e-25 120.6 195 42.1
FAN26G0677 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.9e-25 120.2 207 39.1
Glyma.09G073050 Glycine max HOM05D005897 ORTHO05D007128 2.5e-25 119.8 206 38.8
CSS0017580 Camellia sinensis var. sinensis HOM05D005897 ORTHO05D007128 3.2e-25 119.4 200 39.0
Ciclev10024151m.g Citrus clementina HOM05D005897 ORTHO05D007128 3.2e-25 119.4 194 42.8
Nitab4.5_0000400g0090 Nicotiana tabacum HOM05D005897 ORTHO05D007128 4.2e-25 119.0 222 35.6
Peaxi162Scf00191g00103 Petunia axillaris HOM05D005897 ORTHO05D007128 4.2e-25 119.0 200 40.0
VMungo1215G2819 Vigna mungo HOM05D005897 ORTHO05D007128 5.5e-25 118.6 204 38.7
Actinidia39626 Actinidia chinensis HOM05D005897 ORTHO05D007128 7.2e-25 118.2 192 39.1
C03p11770 Brassica napus HOM05D005897 ORTHO05D007128 9.4e-25 117.9 202 40.6
BolC3t13648H Brassica oleracea HOM05D005897 ORTHO05D007128 9.4e-25 117.9 202 40.6
Oeu055332.1 Olea europaea HOM05D005897 ORTHO05D007128 9.4e-25 117.9 206 35.9
FAN28G0476 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.2e-24 117.5 202 38.6
Glyma.13G113000 Glycine max HOM05D005897 ORTHO05D007128 1.6e-24 117.1 193 39.4
CARHR152530 Cardamine hirsuta HOM05D005897 ORTHO05D007128 4.7e-24 115.5 205 40.0
PGR044G2287 Punica granatum HOM05D005897 ORTHO05D007128 4.7e-24 115.5 209 37.3
Atru.chr7.1754 Acer truncatum HOM05D005897 ORTHO05D007128 6.1e-24 115.2 205 41.0
Nitab4.5_0001092g0030 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.4e-23 114.0 219 36.5
CANSAT56G4244 Cannabis sativa HOM05D005897 ORTHO05D007128 2.3e-23 113.2 203 40.9
Carub.0005s0898 Capsella rubella HOM05D005897 ORTHO05D007128 3.9e-23 112.5 210 41.4
FAN19G1802 Fragaria x ananassa HOM05D005897 ORTHO05D007128 5.2e-23 112.1 209 39.2
FvH4_1g09230 Fragaria vesca HOM05D005897 ORTHO05D007128 6.7e-23 111.7 209 39.2
TAR624G1366 Trochodendron aralioides HOM05D005897 ORTHO05D007128 1.5e-22 110.5 202 38.1
Phvul.003G128400 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 2.0e-22 110.2 198 35.4
SalBow6G0024 Salvia bowleyana HOM05D005897 ORTHO05D007128 2.0e-22 110.2 196 37.2
Thhalv10002680m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 2.6e-22 109.8 198 38.4
Lalb_Chr11g0074041 Lupinus albus HOM05D005897 ORTHO05D007128 2.8e-21 106.3 200 39.0
CARHR192060 Cardamine hirsuta HOM05D005897 ORTHO05D007128 4.8e-21 105.5 204 38.7
TAR383G0419 Trochodendron aralioides HOM05D005897 ORTHO05D007128 1.8e-20 103.6 203 35.5
MSTRG.19434 Avicennia marina HOM05D005897 ORTHO05D007128 3.1e-20 102.8 197 32.5
PGR142G3671 Punica granatum HOM05D005897 ORTHO05D007128 9.1e-20 101.3 196 36.2
THA.LOC104811289 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 1.6e-19 100.5 199 40.2
Oeu010835.1 Olea europaea HOM05D005897 ORTHO05D007128 2.0e-19 100.1 199 34.7
THA.LOC104799609 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 2.0e-19 100.1 224 35.3
Glyma.17G046700 Glycine max HOM05D005897 ORTHO05D007128 2.6e-19 99.8 193 38.3
Nitab4.5_0001699g0070 Nicotiana tabacum HOM05D005897 ORTHO05D007128 4.5e-19 99.0 195 35.4
Oeu055333.1 Olea europaea HOM05D005897 ORTHO05D007128 1.0e-18 97.8 202 34.2
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 1.0e-18 97.8 198 35.4
Rhsim05G0003600 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.7e-18 97.1 201 38.3
Medtr4g124850 Medicago truncatula HOM05D005897 ORTHO05D007128 3.8e-18 95.9 208 37.5
Potri.006G137700 Populus trichocarpa HOM05D005897 ORTHO05D007128 3.8e-18 95.9 224 33.5
Nn6g35653 Nelumbo nucifera HOM05D005897 ORTHO05D007128 5.0e-18 95.5 211 36.0
Lj4g0017959 Lotus japonicus HOM05D005897 ORTHO05D007128 1.2e-16 90.9 196 36.7
MD02G1099300 Malus domestica HOM05D005897 ORTHO05D007128 1.2e-16 90.9 208 38.5
Lsat_1_v5_gn_5_139320 Lactuca sativa HOM05D005897 ORTHO05D007128 2.7e-16 89.7 213 36.6
Nn8g38553 Nelumbo nucifera HOM05D005897 ORTHO05D007128 2.7e-16 89.7 221 32.1
Rhsim03G0226100 Rhododendron simsii HOM05D005897 ORTHO05D007128 4.7e-16 89.0 190 36.8
SGA_v2.0_scaffold21G09544 Striga asiatica HOM05D005897 ORTHO05D007128 8.0e-16 88.2 197 35.0
Migut.J00894 Erythranthe guttata HOM05D005897 ORTHO05D007128 5.2e-15 85.5 203 32.5
Psat4g067280 Pisum sativum HOM05D005897 ORTHO05D007128 8.8e-15 84.7 206 37.4
Lalb_Chr23g0276271 Lupinus albus HOM05D005897 ORTHO05D007128 3.3e-14 82.8 200 35.5
Migut.L01590 Erythranthe guttata HOM05D005897 ORTHO05D007128 5.7e-14 82.0 208 32.2
Eucgr.C03289 Eucalyptus grandis HOM05D005897 ORTHO05D007128 9.7e-14 81.3 195 35.4
TPR.G11456 Trifolium pratense HOM05D005897 ORTHO05D007128 1.4e-12 77.4 202 35.6
Dinv25518 Davidia involucrata HOM05D005897 ORTHO05D007128 3.1e-12 76.3 87 48.3
Actinidia29946 Actinidia chinensis HOM05D005897 ORTHO05D007128 2.0e-11 73.6 201 30.8
AUR62028279 Chenopodium quinoa HOM05D005897 ORTHO05D007128 3.5e-11 72.8 197 32.0
unitig_22.g5071 Utricularia gibba HOM05D005897 ORTHO05D007128 6.5e-10 68.6 204 28.4
PGSC0003DMG400013552 Solanum tuberosum HOM05D005897 ORTHO05D007128 8.5e-10 68.2 192 32.3
Rhsim03G0226200 Rhododendron simsii HOM05D005897 ORTHO05D007128 6.1e-08 62.0 140 37.9
DCAR_005065 Daucus carota HOM05D005897 ORTHO05D007128 3.0e-07 59.7 206 29.6
vmacro15871 Vaccinium macrocarpon HOM05D000200 ORTHO05D000262 3.0e-07 59.7 43 60.5
Actinidia38489 Actinidia chinensis HOM05D005897 ORTHO05D007128 2.0e-06 57.0 143 30.8


User provided reference genes

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