Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G085800 Manihot esculenta HOM05D007692 ORTHO05D009696 4.9e-92 341.3 190 100.0
Duzib168G1711 Durio zibethinus HOM05D007692 ORTHO05D009696 4.0e-46 188.7 190 54.7
Thecc.09G063700 Theobroma cacao HOM05D007692 ORTHO05D009696 1.5e-45 186.8 190 54.2
COL.COLO4_21142 Corchorus olitorius HOM05D007692 ORTHO05D009696 1.6e-42 176.8 192 52.1
CAN.G567.82 Capsicum annuum HOM05D007692 ORTHO05D009696 1.8e-38 163.3 176 51.1
Gohir.D05G040100 Gossypium hirsutum HOM05D007692 ORTHO05D009696 4.5e-37 158.7 188 47.3
Gorai.009G040500 Gossypium raimondii HOM05D007692 ORTHO05D009696 4.5e-37 158.7 188 47.3
Solyc08g061640.1 Solanum lycopersicum HOM05D007692 ORTHO05D009696 1.0e-36 157.5 176 50.6
Nitab4.5_0008422g0010 Nicotiana tabacum HOM05D007692 ORTHO05D009696 3.8e-36 155.6 176 47.7
Peaxi162Scf00486g00102 Petunia axillaris HOM05D007692 ORTHO05D009696 1.1e-35 154.1 175 48.6
Sopen08g017100 Solanum pennellii HOM05D007692 ORTHO05D009696 1.1e-35 154.1 176 49.4
Gohir.A05G038600 Gossypium hirsutum HOM05D007692 ORTHO05D009696 2.5e-35 152.9 189 46.0
Nitab4.5_0000446g0120 Nicotiana tabacum HOM05D007692 ORTHO05D009696 4.2e-35 152.1 176 47.2
PGSC0003DMG400045083 Solanum tuberosum HOM05D007692 ORTHO05D009696 7.1e-35 151.4 176 48.9
Potri.006G220500 Populus trichocarpa HOM05D007692 ORTHO05D009696 9.3e-35 151.0 103 73.8
Sabra06G0170400 Salix brachista HOM05D007692 ORTHO05D009696 1.6e-34 150.2 103 71.8
Dinv22937 Davidia involucrata HOM05D007692 ORTHO05D009696 2.1e-34 149.8 192 52.6
Cpa.g.sc126.21 Carica papaya HOM05D007692 ORTHO05D009696 3.9e-33 145.6 103 68.9
MD15G1049600 Malus domestica HOM05D007692 ORTHO05D009696 2.5e-32 142.9 104 71.2
MD08G1071600 Malus domestica HOM05D007692 ORTHO05D009696 5.7e-32 141.7 104 70.2
Prupe.1G403900 Prunus persica HOM05D007692 ORTHO05D009696 5.7e-32 141.7 104 72.1
QL02p017055 Quercus lobata HOM05D007692 ORTHO05D009696 3.7e-31 139.0 103 67.0
RcHm_v2.0_Chr6g0311901 Rosa chinensis HOM05D007692 ORTHO05D009696 4.8e-31 138.7 104 67.3
FvH4_2g30960 Fragaria vesca HOM05D007692 ORTHO05D009696 6.3e-31 138.3 104 66.3
Hma1.2p1_0278F.1_g111850 Hydrangea macrophylla HOM05D007692 ORTHO05D009696 1.8e-30 136.7 102 65.7
CANSAT25G1329 Cannabis sativa HOM05D007692 ORTHO05D009696 9.0e-30 134.4 105 68.6
Nn2g12400 Nelumbo nucifera HOM05D007692 ORTHO05D009696 9.0e-30 134.4 102 62.7
QL02p017043 Quercus lobata HOM05D007692 ORTHO05D009696 1.2e-29 134.0 101 66.3
CiPaw.15G091700 Carya illinoinensis HOM05D007692 ORTHO05D009696 1.5e-29 133.7 103 64.1
PGR031G0311 Punica granatum HOM05D007692 ORTHO05D009696 2.2e-28 129.8 103 66.0
ClCG05G015760 Citrullus lanatus HOM05D007692 ORTHO05D009696 2.9e-28 129.4 105 61.9
TAR624G0897 Trochodendron aralioides HOM05D007692 ORTHO05D009696 3.8e-28 129.0 98 64.3
MELO3C016914.2 Cucumis melo HOM05D007692 ORTHO05D009696 5.0e-28 128.6 105 61.0
CsaV3_4G036060 Cucumis sativus L. HOM05D007692 ORTHO05D009696 5.0e-28 128.6 105 61.0
Glyma.17G225900 Glycine max HOM05D007692 ORTHO05D009696 1.4e-27 127.1 104 59.6
Sed0007061 Sechium edule HOM05D007692 ORTHO05D009696 3.2e-27 125.9 102 61.8
Haze_18297 Corylus avellana HOM05D007692 ORTHO05D009696 7.2e-27 124.8 103 65.0
Psat6g022960 Pisum sativum HOM05D007692 ORTHO05D009696 7.2e-27 124.8 108 56.5
Medtr1g015470 Medicago truncatula HOM05D007692 ORTHO05D009696 2.7e-26 122.9 103 58.3
Cfa017868 Carpinus fangiana HOM05D007692 ORTHO05D009696 4.6e-26 122.1 103 65.0
arahy.Tifrunner.gnm1.ann1.0E4SK3 Arachis hypogaea HOM05D007692 ORTHO05D009696 7.9e-26 121.3 105 60.0
TPR.G38893 Trifolium pratense HOM05D007692 ORTHO05D009696 1.0e-25 120.9 103 56.3
DCAR_001232 Daucus carota HOM05D006390 ORTHO05D007899 1.3e-25 120.6 98 60.2
VMungo0647G2522 Vigna mungo HOM05D007692 ORTHO05D009696 1.8e-25 120.2 103 60.2
Ciclev10010178m.g Citrus clementina HOM05D007692 ORTHO05D009696 1.1e-24 117.5 103 64.1
Eucgr.C00729 Eucalyptus grandis HOM05D007692 ORTHO05D009696 1.1e-24 117.5 104 54.8
Lj5g0021751 Lotus japonicus HOM05D007692 ORTHO05D009696 1.1e-24 117.5 103 55.3
Nn8g39911 Nelumbo nucifera HOM05D007692 ORTHO05D009696 1.5e-24 117.1 103 61.2
EL10Ac2g03778 Beta vulgaris HOM05D007692 ORTHO05D009696 5.7e-24 115.2 103 61.2
VMungo1309G1304 Vigna mungo HOM05D007692 ORTHO05D009696 7.4e-24 114.8 103 56.3
TPR.G3568 Trifolium pratense HOM05D007692 ORTHO05D009696 9.7e-24 114.4 105 56.2
THA.LOC104810956 Tarenaya hassleriana HOM05D007692 ORTHO05D009696 2.2e-23 113.2 101 51.5
CSS0041722 Camellia sinensis var. sinensis HOM05D007692 ORTHO05D009696 2.8e-23 112.8 90 61.1
TWI63G1278 Tripterygium wilfordii HOM05D007692 ORTHO05D009696 2.8e-23 112.8 102 58.8
Glyma.06G056100 Glycine max HOM05D007692 ORTHO05D009696 8.2e-23 111.3 103 55.3
Medtr3g105090 Medicago truncatula HOM05D007692 ORTHO05D009696 2.4e-22 109.8 102 54.9
Phvul.009G082200 Phaseolus vulgaris HOM05D007692 ORTHO05D009696 3.1e-22 109.4 103 53.4
PSO675G1902 Papaver somniferum HOM05D007692 ORTHO05D009696 5.3e-22 108.6 99 58.6
PSO541G2080 Papaver somniferum HOM05D007692 ORTHO05D009696 1.2e-21 107.5 99 56.6
Sc06g0001120 Simmondsia chinensis HOM05D007692 ORTHO05D009696 5.9e-21 105.1 107 53.3
C09p54830 Brassica napus HOM05D007692 ORTHO05D009696 1.0e-20 104.4 104 51.9
BolC9t58343H Brassica oleracea HOM05D007692 ORTHO05D009696 1.0e-20 104.4 104 51.9
MBI13_g42817_MAGBIO Magnolia biondii HOM05D007692 ORTHO05D009696 1.3e-20 104.0 98 54.1
A10p18810 Brassica napus HOM05D007692 ORTHO05D009696 2.9e-20 102.8 102 52.0
BraA10t43961Z Brassica rapa HOM05D007692 ORTHO05D009696 2.9e-20 102.8 102 52.0
Lsat_1_v5_gn_7_58320 Lactuca sativa HOM05D006390 ORTHO05D007899 2.9e-20 102.8 104 50.0
ECA240G2866 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.8e-20 102.4 97 55.7
Thhalv10015977m.g Eutrema salsugineum HOM05D007692 ORTHO05D009696 3.8e-20 102.4 104 51.9
Phvul.001G038600 Phaseolus vulgaris HOM05D007692 ORTHO05D009696 3.8e-20 102.4 88 59.1
BcaB08g36470 Brassica carinata HOM05D007692 ORTHO05D009696 5.0e-20 102.1 102 52.0
Lalb_Chr11g0063341 Lupinus albus HOM05D007692 ORTHO05D009696 5.0e-20 102.1 103 53.4
Aqoxy2G03896 Aquilegia oxysepala HOM05D007692 ORTHO05D009696 6.5e-20 101.7 103 50.5
Oeu003971.1 Olea europaea HOM05D007692 ORTHO05D009696 1.1e-19 100.9 104 51.0
HPP92_004156 Vanilla planifolia HOM05D007692 ORTHO05D009696 1.4e-19 100.5 100 50.0
SalBow4G0926 Salvia bowleyana HOM05D007692 ORTHO05D009696 1.9e-19 100.1 99 49.5
Ah.11g044290 Amaranthus hybridus HOM05D007692 ORTHO05D009696 3.2e-19 99.4 102 52.0
unitig_32.g11527 Utricularia gibba HOM05D007692 ORTHO05D009696 3.2e-19 99.4 106 47.2
Psat5g030520 Pisum sativum HOM05D007692 ORTHO05D009696 9.4e-19 97.8 86 58.1
HanXRQChr03g0065641 Helianthus annuus HOM05D007692 ORTHO05D009696 2.1e-18 96.7 102 53.9
SGA_v2.0_scaffold20G09157 Striga asiatica HOM05D006390 ORTHO05D007899 2.1e-18 96.7 104 44.2
Zm00001eb005780 Zea mays HOM05D007692 ORTHO05D009696 1.1e-16 90.9 101 45.5
Medtr1g015490 Medicago truncatula HOM05D007692 ORTHO05D009696 2.0e-16 90.1 94 48.9
CARHR191630 Cardamine hirsuta HOM05D007692 ORTHO05D009696 2.5e-16 89.7 98 45.9
Sp6g23280 Schrenkiella parvula HOM05D007692 ORTHO05D009696 5.7e-16 88.6 104 45.2
Atru.chr7.1844 Acer truncatum HOM05D007692 ORTHO05D009696 1.3e-15 87.4 71 63.4
Lj1g0020593 Lotus japonicus HOM05D007692 ORTHO05D009696 1.7e-15 87.0 104 48.1
ATR0598G206 Amborella trichopoda HOM05D007692 ORTHO05D009696 1.8e-14 83.6 100 45.0
Duzib150G0238 Durio zibethinus HOM05D007692 ORTHO05D009696 1.8e-14 83.6 183 35.0
CDE04G2134 Ceratophyllum demersum HOM05D007692 ORTHO05D009696 4.1e-14 82.4 106 43.4
Carub.0006s1955 Capsella rubella HOM05D007692 ORTHO05D009696 5.3e-14 82.0 100 46.0
AT5G21910 Arabidopsis thaliana HOM05D007692 ORTHO05D009696 9.1e-14 81.3 100 45.0
Lalb_Chr14g0366461 Lupinus albus HOM05D007692 ORTHO05D009696 2.0e-13 80.1 71 57.7
Cc08_g01120 Coffea canephora HOM05D007692 ORTHO05D009696 3.4e-13 79.3 104 46.2
Psat6g004480 Pisum sativum HOM05D007692 ORTHO05D009696 1.0e-12 77.8 79 53.2
Carub.0005s0963 Capsella rubella HOM05D007692 ORTHO05D009696 5.0e-12 75.5 100 42.0
TAR624G1426 Trochodendron aralioides HOM05D000001 ORTHO05D000003 5.0e-12 75.5 64 59.4
Os03g0176900 Oryza sativa ssp. japonica HOM05D007692 ORTHO05D009696 3.2e-11 72.8 101 40.6
BcaB01g04756 Brassica carinata HOM05D007692 ORTHO05D009696 5.7e-08 62.0 41 63.4
Sed0007062 Sechium edule HOM05D007692 ORTHO05D009696 5.7e-08 62.0 49 59.2


User provided reference genes

Program Settings