Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G080850 Manihot esculenta HOM05D009290 ORTHO05D009597 7.1e-144 513.8 248 100.0
Manes.12G086248 Manihot esculenta HOM05D009290 ORTHO05D009597 1.0e-134 483.4 243 95.9
Manes.06G115750 Manihot esculenta HOM05D009290 ORTHO05D009597 1.8e-134 482.6 243 95.5
Manes.07G063157 Manihot esculenta HOM05D009290 ORTHO05D009597 6.3e-124 447.6 218 98.6
Manes.18G114301 Manihot esculenta HOM05D009290 ORTHO05D009597 5.9e-122 441.0 245 89.0
Manes.08G028050 Manihot esculenta HOM05D009290 ORTHO05D009597 3.7e-100 368.6 191 94.2
Manes.08G084511 Manihot esculenta HOM05D009290 ORTHO05D009597 2.1e-74 283.1 153 90.2
Manes.18G135166 Manihot esculenta HOM05D009290 ORTHO05D009597 8.6e-73 277.7 137 97.1
Manes.11G040473 Manihot esculenta HOM05D009290 ORTHO05D009597 2.8e-71 272.7 140 93.6
Manes.08G081411 Manihot esculenta HOM05D009290 ORTHO05D009597 1.9e-56 223.4 137 82.5
Manes.15G180436 Manihot esculenta HOM05D009290 ORTHO05D009597 7.3e-56 221.5 119 88.2
Manes.06G160267 Manihot esculenta HOM05D009290 ORTHO05D009597 3.0e-49 199.5 120 80.8
Nitab4.5_0010535g0040 Nicotiana tabacum HOM05D009290 ORTHO05D009597 5.3e-46 188.7 241 41.5
Nitab4.5_0022706g0010 Nicotiana tabacum HOM05D009290 ORTHO05D009597 1.6e-34 150.6 120 54.2
Nitab4.5_0005770g0030 Nicotiana tabacum HOM05D009290 ORTHO05D009597 4.6e-34 149.1 107 58.9
Nitab4.5_0002907g0070 Nicotiana tabacum HOM05D009290 ORTHO05D009597 1.6e-26 124.0 106 54.7
CAN.G215.7 Capsicum annuum HOM05D009290 ORTHO05D013052 4.8e-23 112.5 129 45.0
Nitab4.5_0007164g0020 Nicotiana tabacum HOM05D009290 ORTHO05D009597 6.9e-22 108.6 111 48.6
AUR62041429 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.2e-21 107.8 100 48.0
EL10Ac2g03816 Beta vulgaris HOM05D008455 ORTHO05D009597 1.9e-19 100.5 100 44.0
EL10Ac9g22691 Beta vulgaris HOM05D008455 ORTHO05D009597 1.9e-19 100.5 115 40.9
EL10Ac2g03097 Beta vulgaris HOM05D008455 ORTHO05D009597 2.5e-19 100.1 135 40.7
EL10Ac4g08902 Beta vulgaris HOM05D008455 ORTHO05D009597 4.2e-19 99.4 133 40.6
AUR62031247 Chenopodium quinoa HOM05D008455 ORTHO05D009597 9.4e-19 98.2 100 47.0
Manes.11G040457 Manihot esculenta HOM05D009290 ORTHO05D009597 2.1e-18 97.1 44 100.0
Nitab4.5_0014285g0010 Nicotiana tabacum HOM05D009290 ORTHO05D009597 2.7e-18 96.7 73 57.5
EL10Ac3g06257 Beta vulgaris HOM05D008455 ORTHO05D009597 3.6e-18 96.3 110 41.8
EL10Ac3g06519 Beta vulgaris HOM05D008455 ORTHO05D009597 1.4e-17 94.4 100 40.0
AUR62037959 Chenopodium quinoa HOM05D000107 ORTHO05D009597 1.8e-17 94.0 96 42.7
AUR62039309 Chenopodium quinoa HOM05D008455 ORTHO05D009597 1.8e-17 94.0 96 42.7
Ah.06g194520 Amaranthus hybridus HOM05D000711 ORTHO05D000545 2.3e-17 93.6 183 31.1
EL10Ac2g03454 Beta vulgaris HOM05D008455 ORTHO05D009597 3.0e-17 93.2 92 42.4
Manes.07G073322 Manihot esculenta HOM05D009290 ORTHO05D009597 3.9e-17 92.8 43 97.7
Hund08561 Selenicereus undatus HOM05D008455 ORTHO05D009597 3.3e-16 89.7 131 36.6
AUR62032009 Chenopodium quinoa HOM05D008455 ORTHO05D009597 2.2e-15 87.0 77 53.2
Hund15433 Selenicereus undatus HOM05D008455 ORTHO05D009597 1.4e-14 84.3 100 39.0
AUR62037081 Chenopodium quinoa HOM05D008455 ORTHO05D009597 1.8e-14 84.0 96 41.7
EL10Ac3g06529 Beta vulgaris HOM05D008455 ORTHO05D009597 2.4e-14 83.6 78 43.6
AUR62037945 Chenopodium quinoa HOM05D008455 ORTHO05D009597 3.1e-14 83.2 96 40.6
Nitab4.5_0000111g0060 Nicotiana tabacum HOM05D008455 ORTHO05D009597 9.1e-14 81.6 67 52.2
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 9.1e-14 81.6 111 35.1
Nitab4.5_0001078g0120 Nicotiana tabacum HOM05D009290 ORTHO05D009597 2.0e-13 80.5 145 31.7
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.7e-13 78.6 108 37.0
Manes.10G059450 Manihot esculenta HOM05D009290 ORTHO05D009597 1.7e-12 77.4 35 97.1
AUR62025805 Chenopodium quinoa HOM05D003888 ORTHO05D007163 2.9e-12 76.6 99 35.4
Sopen11g014670 Solanum pennellii HOM05D003888 ORTHO05D007163 8.5e-12 75.1 126 34.1
PGR044G2317 Punica granatum HOM05D001309 ORTHO05D000385 2.5e-11 73.6 105 33.3
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 3.2e-11 73.2 86 34.9
Nitab4.5_0001261g0020 Nicotiana tabacum HOM05D009290 ORTHO05D009597 3.2e-11 73.2 85 40.0
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 9.4e-11 71.6 113 31.9
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.4e-11 71.6 119 37.0
Manes.17G119355 Manihot esculenta HOM05D009290 ORTHO05D009597 1.6e-10 70.9 35 88.6
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-10 70.5 148 28.4
EL10Ac2g03313 Beta vulgaris HOM05D000107 ORTHO05D000062 2.7e-10 70.1 99 31.3
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 2.7e-10 70.1 99 31.3
CAN.G143.8 Capsicum annuum HOM05D000389 ORTHO05D013052 3.6e-10 69.7 99 37.4
AUR62039826 Chenopodium quinoa HOM05D008455 ORTHO05D009597 4.7e-10 69.3 92 38.0
Hund00844 Selenicereus undatus HOM05D008455 ORTHO05D009597 7.9e-10 68.6 144 29.9
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.4e-09 67.8 95 36.8
Nn1g00481 Nelumbo nucifera HOM05D001309 ORTHO05D000385 5.1e-09 65.9 91 35.2
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.8e-09 65.1 102 31.4
EL10Ac5g11043 Beta vulgaris HOM05D000107 ORTHO05D007163 1.1e-08 64.7 144 25.7
Nn3g21442 Nelumbo nucifera HOM05D001309 ORTHO05D000385 1.1e-08 64.7 80 33.8
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 1.5e-08 64.3 222 25.7
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 1.5e-08 64.3 144 25.7
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 2.0e-08 63.9 178 25.3
MBI05_g40697_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.0e-08 63.9 102 32.4
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 2.6e-08 63.5 198 28.3
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 3.3e-08 63.2 87 35.6
MBI19_g00149_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.3e-08 63.2 84 33.3
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.3e-08 63.2 84 33.3
EL10Ac2g02915 Beta vulgaris HOM05D000107 ORTHO05D000062 4.4e-08 62.8 190 25.8
MBI13_g26301_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.4e-08 62.8 111 32.4
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.4e-08 62.8 75 37.3
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 5.7e-08 62.4 274 23.0
EL10Ac7g17511 Beta vulgaris HOM05D000107 ORTHO05D000062 7.4e-08 62.0 77 35.1
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 7.4e-08 62.0 87 35.6
RhsimUnG0218400 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.4e-08 62.0 134 29.9
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 9.7e-08 61.6 75 36.0
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 1.3e-07 61.2 104 32.7
MBI11_g19485_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.3e-07 61.2 83 32.5
EL10Ac1g02033 Beta vulgaris HOM05D003888 ORTHO05D007163 1.7e-07 60.8 144 25.0
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-07 60.8 75 36.0
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 2.2e-07 60.5 204 26.5
Rhsim04G0083300 Rhododendron simsii HOM05D007314 ORTHO05D010380 2.2e-07 60.5 111 31.5
Rhsim06G0121300 Rhododendron simsii HOM05D007314 ORTHO05D010380 2.2e-07 60.5 111 31.5
HanXRQChr03g0071511 Helianthus annuus HOM05D008488 ORTHO05D020588 2.8e-07 60.1 165 27.9
TAR374G1143 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.7e-07 59.7 85 32.9
EL10Ac1g01767 Beta vulgaris HOM05D003888 ORTHO05D007163 4.8e-07 59.3 106 28.3
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 4.8e-07 59.3 100 33.0
MBI19_g12820_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.8e-07 59.3 83 31.3
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 6.3e-07 58.9 204 27.0
Duzib084G0418 Durio zibethinus HOM05D000539 ORTHO05D000233 6.3e-07 58.9 121 32.2
TAR376G0246 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.3e-07 58.9 101 33.7
AUR62037410 Chenopodium quinoa HOM05D008455 ORTHO05D009597 8.2e-07 58.5 96 33.3
EL10As3g23351 Beta vulgaris HOM05D008455 ORTHO05D009597 1.1e-06 58.2 54 38.9
AUR62033711 Chenopodium quinoa HOM05D008455 ORTHO05D009597 1.4e-06 57.8 84 35.7
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.4e-06 57.8 101 33.7
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 1.8e-06 57.4 106 30.2
MD09G1027200 Malus domestica HOM05D005763 ORTHO05D005970 1.8e-06 57.4 87 36.8
GSVIVG01019142001 Vitis vinifera HOM05D008595 ORTHO05D009597 1.8e-06 57.4 107 28.0
EL10Ac2g03235 Beta vulgaris HOM05D000107 ORTHO05D000062 2.4e-06 57.0 75 33.3
EL10Ac6g14473 Beta vulgaris HOM05D008595 ORTHO05D010945 2.4e-06 57.0 105 26.7
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 2.4e-06 57.0 83 31.3
Phvul.L001738 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 2.4e-06 57.0 139 31.7
Prupe.1G578800 Prunus persica HOM05D005763 ORTHO05D005970 2.4e-06 57.0 93 33.3
Rhsim01G0098700 Rhododendron simsii HOM05D007314 ORTHO05D010380 2.4e-06 57.0 111 32.4
CSS0004008 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.1e-06 56.6 147 27.9
COL.COLO4_16333 Corchorus olitorius HOM05D011604 ORTHO05D012513 3.1e-06 56.6 85 31.8
HanXRQChr03g0084621 Helianthus annuus HOM05D008488 ORTHO05D000385 3.1e-06 56.6 113 30.1
MBI02_g29975_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.1e-06 56.6 117 29.9
MBI14_g07746_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.1e-06 56.6 82 28.0
Solyc07g039250.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.1e-06 56.6 67 37.3
TAR375G1128 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.1e-06 56.6 101 34.7
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 4.1e-06 56.2 99 29.3
MBI09_g15192_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.1e-06 56.2 85 30.6
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.3e-06 55.8 147 27.9
COL.COLO4_06576 Corchorus olitorius HOM05D001309 ORTHO05D000385 5.3e-06 55.8 98 30.6
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 5.3e-06 55.8 99 29.3
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 5.3e-06 55.8 99 29.3
Medtr2g092960 Medicago truncatula HOM05D007793 ORTHO05D010104 5.3e-06 55.8 83 33.7
TAR633G1156 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.3e-06 55.8 97 32.0
arahy.Tifrunner.gnm1.ann1.CXU7YK Arachis hypogaea HOM05D010482 ORTHO05D000385 7.0e-06 55.5 100 29.0
MBI09_g39165_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.0e-06 55.5 117 29.1
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 9.1e-06 55.1 221 25.8
CSS0012868 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 9.1e-06 55.1 96 35.4
DCAR_001756 Daucus carota HOM05D001309 ORTHO05D000385 9.1e-06 55.1 94 31.9
ECA234G2194 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.1e-06 55.1 81 30.9
Medtr7g027580 Medicago truncatula HOM05D010482 ORTHO05D000385 9.1e-06 55.1 79 34.2
Prupe.7G105300 Prunus persica HOM05D005763 ORTHO05D005970 9.1e-06 55.1 87 34.5
TAR636G1099 Trochodendron aralioides HOM05D008595 ORTHO05D030706 9.1e-06 55.1 92 28.3


User provided reference genes

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