Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G073800 Manihot esculenta HOM05D004583 ORTHO05D005469 5.4e-303 1043.5 520 100.0
Potri.018G046700 Populus trichocarpa HOM05D004583 ORTHO05D005469 1.5e-215 753.1 537 72.3
Sabra18G0045300 Salix brachista HOM05D004583 ORTHO05D005469 2.3e-205 719.2 554 68.1
Potri.006G236400 Populus trichocarpa HOM05D004583 ORTHO05D005469 1.5e-204 716.5 537 69.3
Ciclev10007949m.g Citrus clementina HOM05D004583 ORTHO05D005469 6.0e-201 704.5 536 67.0
TWI63G0012 Tripterygium wilfordii HOM05D004583 ORTHO05D005469 1.7e-200 703.0 543 66.9
MD15G1090900 Malus domestica HOM05D004583 ORTHO05D005469 4.3e-199 698.4 538 66.7
QL12p041048 Quercus lobata HOM05D004583 ORTHO05D005469 4.7e-198 694.9 543 66.5
Sabra06G0184800 Salix brachista HOM05D004583 ORTHO05D005469 5.2e-197 691.4 539 66.8
Prupe.1G445300 Prunus persica HOM05D004583 ORTHO05D005469 1.9e-194 682.9 543 65.6
Cfa013385 Carpinus fangiana HOM05D004583 ORTHO05D005469 4.2e-194 681.8 547 65.3
GSVIVG01035292001 Vitis vinifera HOM05D004583 ORTHO05D005469 2.1e-190 669.5 547 64.4
MD08G1111400 Malus domestica HOM05D004583 ORTHO05D005469 2.8e-190 669.1 539 65.1
CSS0042231 Camellia sinensis var. sinensis HOM05D004583 ORTHO05D005469 1.7e-187 659.8 538 65.1
CiPaw.08G027000 Carya illinoinensis HOM05D004583 ORTHO05D005469 4.2e-186 655.2 550 64.0
FvH4_2g35320 Fragaria vesca HOM05D004583 ORTHO05D005469 4.2e-186 655.2 539 64.4
Hma1.2p1_0049F.1_g028360 Hydrangea macrophylla HOM05D004583 ORTHO05D005469 7.1e-186 654.4 543 63.5
SHI18791 Sapria himalayana HOM05D004583 ORTHO05D005469 7.1e-186 654.4 542 62.5
Sc09g0009440 Simmondsia chinensis HOM05D004583 ORTHO05D005469 7.1e-186 654.4 537 63.3
FAN20G1421 Fragaria x ananassa HOM05D004583 ORTHO05D005469 3.3e-183 645.6 539 63.1
TWI34G1497 Tripterygium wilfordii HOM05D004583 ORTHO05D005469 7.3e-183 644.4 544 63.1
RcHm_v2.0_Chr6g0306601 Rosa chinensis HOM05D004583 ORTHO05D005469 2.8e-182 642.5 540 63.1
Lsat_1_v5_gn_1_42160 Lactuca sativa HOM05D004583 ORTHO05D005469 3.1e-181 639.0 522 63.2
PGR031G0432 Punica granatum HOM05D004583 ORTHO05D005469 2.0e-180 636.3 554 62.3
Nitab4.5_0001737g0070 Nicotiana tabacum HOM05D004583 ORTHO05D005469 9.9e-180 634.0 544 61.9
Hund03382 Selenicereus undatus HOM05D004583 ORTHO05D005469 1.7e-179 633.3 548 60.4
Sopen12g031740 Solanum pennellii HOM05D004583 ORTHO05D005469 8.4e-179 630.9 539 60.5
Actinidia15745 Actinidia chinensis HOM05D004583 ORTHO05D005469 1.4e-178 630.2 536 62.9
CANSAT25G3668 Cannabis sativa HOM05D004583 ORTHO05D005469 1.9e-178 629.8 538 61.5
Solyc12g095840.2 Solanum lycopersicum HOM05D004583 ORTHO05D005469 1.9e-178 629.8 539 60.3
TAR636G0454 Trochodendron aralioides HOM05D004583 ORTHO05D005469 1.2e-177 627.1 541 61.6
HanXRQChr11g0352321 Helianthus annuus HOM05D004583 ORTHO05D005469 1.0e-176 624.0 528 62.1
Nitab4.5_0001309g0070 Nicotiana tabacum HOM05D004583 ORTHO05D005469 1.0e-176 624.0 540 61.7
ClCG08G012110 Citrullus lanatus HOM05D004583 ORTHO05D005469 1.3e-176 623.6 541 61.2
Eucgr.C00611 Eucalyptus grandis HOM05D004583 ORTHO05D005469 1.3e-176 623.6 537 61.1
Sed0024833 Sechium edule HOM05D004583 ORTHO05D005469 1.8e-176 623.2 541 60.4
Nn6g35316 Nelumbo nucifera HOM05D004583 ORTHO05D005469 2.3e-176 622.9 549 61.2
FAN27G2572 Fragaria x ananassa HOM05D004583 ORTHO05D005469 8.7e-176 620.9 558 60.8
Thecc.09G047500 Theobroma cacao HOM05D004583 ORTHO05D005469 1.1e-175 620.5 519 61.5
BolC8t51418H Brassica oleracea HOM05D004583 ORTHO05D005469 4.0e-173 612.1 530 60.2
Sp4g05420 Schrenkiella parvula HOM05D004583 ORTHO05D005469 6.9e-173 611.3 550 58.7
BcaB08g35216 Brassica carinata HOM05D004583 ORTHO05D005469 3.4e-172 609.0 549 59.2
BcaC07g40848 Brassica carinata HOM05D004583 ORTHO05D005469 1.0e-171 607.4 533 59.8
Aa31LG5G9840 Aethionema arabicum HOM05D004583 ORTHO05D005469 1.3e-171 607.1 546 60.1
arahy.Tifrunner.gnm1.ann1.R6LPAT Arachis hypogaea HOM05D004583 ORTHO05D005469 1.7e-171 606.7 545 59.3
A03p27060 Brassica napus HOM05D004583 ORTHO05D005469 1.7e-171 606.7 548 58.4
BraA03t11919Z Brassica rapa HOM05D004583 ORTHO05D005469 1.7e-171 606.7 548 58.4
Lalb_Chr22g0361041 Lupinus albus HOM05D004583 ORTHO05D005469 3.8e-171 605.5 553 58.6
Cc08_g09870 Coffea canephora HOM05D004583 ORTHO05D005469 4.9e-171 605.1 538 59.7
Rhsim02G0175400 Rhododendron simsii HOM05D004583 ORTHO05D005469 6.5e-171 604.7 541 59.7
Thhalv10001956m.g Eutrema salsugineum HOM05D004583 ORTHO05D005469 1.1e-170 604.0 541 59.5
C03p32470 Brassica napus HOM05D004583 ORTHO05D005469 2.5e-170 602.8 547 58.9
BolC3t15588H Brassica oleracea HOM05D004583 ORTHO05D005469 5.5e-170 601.7 548 58.6
A09p55470 Brassica napus HOM05D004583 ORTHO05D005469 1.2e-169 600.5 545 59.1
Peaxi162Scf00064g01528 Petunia axillaris HOM05D004583 ORTHO05D005469 1.6e-169 600.1 539 59.7
CAN.G208.65 Capsicum annuum HOM05D004583 ORTHO05D005469 2.1e-169 599.7 513 60.6
Medtr1g007160 Medicago truncatula HOM05D004583 ORTHO05D005469 3.0e-168 595.9 545 58.7
DCAR_004462 Daucus carota HOM05D004583 ORTHO05D005469 6.7e-168 594.7 534 59.0
AL4G17420 Arabidopsis lyrata HOM05D004583 ORTHO05D005469 8.7e-168 594.3 554 58.3
Gohir.D07G025000 Gossypium hirsutum HOM05D004583 ORTHO05D005469 8.7e-168 594.3 527 59.4
Gorai.001G026100 Gossypium raimondii HOM05D004583 ORTHO05D005469 1.5e-167 593.6 525 59.0
Carub.0004s0553 Capsella rubella HOM05D004583 ORTHO05D005469 3.3e-167 592.4 559 56.5
AT2G25740 Arabidopsis thaliana HOM05D004583 ORTHO05D005469 7.4e-167 591.3 555 57.7
Psat6g035200 Pisum sativum HOM05D004583 ORTHO05D005469 9.6e-167 590.9 553 57.3
Gohir.A07G022241 Gossypium hirsutum HOM05D004583 ORTHO05D005469 2.8e-166 589.3 525 59.6
AUR62009234 Chenopodium quinoa HOM05D004583 ORTHO05D005469 3.7e-166 589.0 547 58.9
PSO210G3632 Papaver somniferum HOM05D004583 ORTHO05D005469 1.4e-165 587.0 539 58.6
THA.LOC104803803 Tarenaya hassleriana HOM05D004583 ORTHO05D005469 1.4e-165 587.0 550 58.7
FAN15G2845 Fragaria x ananassa HOM05D004583 ORTHO05D005469 1.8e-165 586.6 527 61.1
EL10Ac2g03985 Beta vulgaris HOM05D004583 ORTHO05D005469 3.1e-165 585.9 557 57.1
Oeu038813.1 Olea europaea HOM05D004583 ORTHO05D005469 3.1e-165 585.9 550 58.0
TAR624G1263 Trochodendron aralioides HOM05D004583 ORTHO05D005469 5.3e-165 585.1 543 57.5
ECA248G2390 Erigeron canadensis HOM05D004583 ORTHO05D005469 7.6e-164 581.3 532 58.1
TPR.G24505 Trifolium pratense HOM05D004583 ORTHO05D005469 3.8e-163 578.9 554 56.5
AUR62041959 Chenopodium quinoa HOM05D004583 ORTHO05D005469 1.9e-162 576.6 589 54.7
MBI04_g20300_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 3.2e-162 575.9 537 58.8
Duzib168G1134 Durio zibethinus HOM05D004583 ORTHO05D005469 5.5e-162 575.1 524 59.5
Lj1g0018877 Lotus japonicus HOM05D004583 ORTHO05D005469 1.2e-161 573.9 539 57.9
CsaV3_2G030710 Cucumis sativus L. HOM05D004583 ORTHO05D005469 1.6e-161 573.5 545 57.1
Ca_15574_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 2.7e-161 572.8 511 59.9
Phvul.009G111600 Phaseolus vulgaris HOM05D004583 ORTHO05D005469 2.7e-161 572.8 540 56.7
VMungo1309G0941 Vigna mungo HOM05D004583 ORTHO05D005469 2.7e-161 572.8 541 56.7
C08p38460 Brassica napus HOM05D004583 ORTHO05D005469 5.1e-160 568.5 533 57.8
Migut.E01537 Erythranthe guttata HOM05D004583 ORTHO05D005469 1.1e-159 567.4 526 56.8
AUR62041963 Chenopodium quinoa HOM05D004583 ORTHO05D005469 1.1e-157 560.8 556 56.3
Medtr3g110340 Medicago truncatula HOM05D004583 ORTHO05D005469 3.1e-157 559.3 524 57.4
PSO210G2011 Papaver somniferum HOM05D004583 ORTHO05D005469 5.9e-156 555.1 530 57.2
Aqoxy7G03869 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 2.1e-153 546.6 553 53.7
MSTRG.14029 Avicennia marina HOM05D004583 ORTHO05D005469 2.1e-153 546.6 540 54.8
MELO3C011128.2 Cucumis melo HOM05D004583 ORTHO05D005469 3.0e-152 542.7 617 50.7
CARHR115490 Cardamine hirsuta HOM05D004583 ORTHO05D005469 3.9e-152 542.3 499 57.1
Dinv23388 Davidia involucrata HOM05D004583 ORTHO05D005469 3.9e-152 542.3 477 62.3
BraA09t40949Z Brassica rapa HOM05D004583 ORTHO05D005469 6.7e-152 541.6 511 57.9
Psat5g020600 Pisum sativum HOM05D004583 ORTHO05D005469 4.3e-151 538.9 476 58.2
ATR0705G143 Amborella trichopoda HOM05D004583 ORTHO05D005469 4.8e-150 535.4 566 52.7
BcaC01g04904 Brassica carinata HOM05D004583 ORTHO05D005469 2.0e-148 530.0 548 54.2
arahy.Tifrunner.gnm1.ann1.6GB5J4 Arachis hypogaea HOM05D004583 ORTHO05D005469 4.5e-148 528.9 515 57.5
Glyma.04G086400 Glycine max HOM05D004583 ORTHO05D005469 7.7e-148 528.1 449 61.2
COL.COLO4_20995 Corchorus olitorius HOM05D004583 ORTHO05D005469 1.3e-147 527.3 482 58.3
TPR.G12398 Trifolium pratense HOM05D004583 ORTHO05D005469 5.0e-147 525.4 536 53.2
SalBow1G6079 Salvia bowleyana HOM05D004583 ORTHO05D005469 9.4e-146 521.2 595 48.7
Lj7C698G10 Lonicera japonica HOM05D004583 ORTHO05D005469 1.2e-145 520.8 486 56.6
CANSAT35G1178 Cannabis sativa HOM05D004583 ORTHO05D005469 2.1e-145 520.0 535 53.5
SGA_v2.0_scaffold169G38659 Striga asiatica HOM05D004583 ORTHO05D005469 1.5e-143 513.8 565 49.2
unitig_32.g11475 Utricularia gibba HOM05D004583 ORTHO05D005469 2.8e-142 509.6 517 52.6
arahy.Tifrunner.gnm1.ann1.M0YYQ7 Arachis hypogaea HOM05D004583 ORTHO05D005469 1.9e-138 496.9 484 53.7
MSTRG.1664 Avicennia marina HOM05D004583 ORTHO05D005469 2.5e-138 496.5 464 55.2
arahy.Tifrunner.gnm1.ann1.AK4U3Y Arachis hypogaea HOM05D004583 ORTHO05D005469 5.5e-138 495.4 485 53.6
Os05g0521500 Oryza sativa ssp. japonica HOM05D004583 ORTHO05D005469 5.5e-138 495.4 537 50.8
vmacro11048 Vaccinium macrocarpon HOM05D004583 ORTHO05D005469 6.1e-137 491.9 512 53.1
CiPaw.07G202200 Carya illinoinensis HOM05D004583 ORTHO05D005469 4.4e-135 485.7 453 60.5
Lalb_Chr23g0269711 Lupinus albus HOM05D004583 ORTHO05D005469 2.8e-134 483.0 469 53.3
Actinidia14686 Actinidia chinensis HOM05D004583 ORTHO05D005469 8.2e-134 481.5 551 52.8
Zm00001eb293710 Zea mays HOM05D004583 ORTHO05D005469 1.3e-131 474.2 554 48.7
Aqoxy7G01424 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 5.0e-123 445.7 544 48.7
Rhsim02G0175600 Rhododendron simsii HOM05D004583 ORTHO05D005469 4.0e-120 436.0 454 55.3
Os01g0743600 Oryza sativa ssp. japonica HOM05D004583 ORTHO05D005469 1.5e-119 434.1 536 46.3
HPP92_022971 Vanilla planifolia HOM05D004583 ORTHO05D005469 2.0e-119 433.7 442 52.7
Mapoly0168s0005 Marchantia polymorpha HOM05D004583 ORTHO05D005469 2.3e-115 420.2 544 43.0
DCAR_003076 Daucus carota HOM05D004583 ORTHO05D005469 5.7e-111 405.6 494 48.0
Atru.chr7.2059 Acer truncatum HOM05D004583 ORTHO05D005469 1.3e-110 404.4 321 63.6
Pp3c5_21890 Physcomitrium patens HOM05D004583 ORTHO05D005469 4.1e-109 399.4 573 40.8
Pp3c5_21897 Physcomitrium patens HOM05D004583 ORTHO05D005469 4.1e-109 399.4 573 40.8
Pp3c6_5840 Physcomitrium patens HOM05D004583 ORTHO05D005469 7.8e-108 395.2 569 41.1
Haze_21911 Corylus avellana HOM05D004583 ORTHO05D005469 2.1e-105 387.1 315 61.9
Pp3c9_19040 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.2e-103 381.3 543 40.9
Pp3c15_22980 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.1e-101 374.8 544 41.7
SMO238G0017 Selaginella moellendorffii HOM05D004583 ORTHO05D005469 1.1e-98 364.8 497 42.5
Zm00001eb153580 Zea mays HOM05D004583 ORTHO05D005469 3.7e-94 349.7 534 40.4
SEGI_02523 Sequoiadendron giganteum HOM05D004583 ORTHO05D005469 9.2e-93 345.1 461 47.1
CDE02G1982 Ceratophyllum demersum HOM05D004583 ORTHO05D001336 8.6e-83 312.0 368 46.2
CBR_g21950 Chara braunii HOM05D004583 ORTHO05D005469 5.8e-79 299.3 698 31.8
Ah.10g034890 Amaranthus hybridus HOM05D004583 ORTHO05D005469 2.1e-73 280.8 394 44.2
MBI04_g32315_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 2.4e-69 267.3 179 68.7
Pp3c27_6400 Physcomitrium patens HOM05D004583 ORTHO05D005469 4.2e-69 266.5 612 33.5
Pp3c16_16060 Physcomitrium patens HOM05D004583 ORTHO05D005469 5.4e-69 266.2 616 34.3
AagrBONN_evm.TU.Sc2ySwM_117.1952 Anthoceros agrestis HOM05D004583 ORTHO05D005469 1.6e-68 264.6 447 39.1
Cpa.g.sc7.206 Carica papaya HOM05D004583 ORTHO05D005469 3.3e-66 256.9 168 70.2
Cpa.g.c37634 Carica papaya HOM05D004583 ORTHO05D005469 2.6e-55 220.7 255 49.8
Atru.chr7.2058 Acer truncatum HOM05D004583 ORTHO05D005469 7.6e-55 219.2 186 65.1
Haze_21912 Corylus avellana HOM05D004583 ORTHO05D005469 2.6e-47 194.1 155 68.4
TPR.G9691 Trifolium pratense HOM05D004583 ORTHO05D005469 5.5e-45 186.4 203 45.3
Aqoxy6G01950 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 1.0e-43 182.2 276 43.8
CDE02G3504 Ceratophyllum demersum HOM05D004583 ORTHO05D005469 1.3e-41 175.3 151 58.3
Ca_19225_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 7.2e-37 159.5 168 53.0
MBI04_g42480_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 2.7e-36 157.5 146 63.7
Lj4g0027824 Lotus japonicus HOM05D004583 ORTHO05D005469 2.6e-34 151.0 136 60.3
Glyma.06G087900 Glycine max HOM05D004583 ORTHO05D005469 1.5e-31 141.7 527 25.0
Ca_12761_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 1.4e-29 135.2 152 49.3
Aqoxy6G01951 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 3.1e-24 117.5 94 61.7
PRCOL_00000859 Prasinoderma coloniale HOM05D004583 ORTHO05D005469 3.1e-24 117.5 179 35.8
MCO16G603 Micromonas commoda HOM05D004583 ORTHO05D005469 3.2e-21 107.5 170 34.7
HPP92_022972 Vanilla planifolia HOM05D004583 ORTHO05D005469 5.7e-18 96.7 133 46.6
TPR.G7872 Trifolium pratense HOM05D004583 ORTHO05D005469 9.7e-18 95.9 102 48.0
Duzib150G0365 Durio zibethinus HOM05D004583 ORTHO05D005469 2.7e-15 87.8 84 52.4
Cpa.g.c46051 Carica papaya HOM05D004583 ORTHO05D005469 2.8e-09 67.8 39 79.5
Cre13.g585651 Chlamydomonas reinhardtii HOM05D004583 ORTHO05D005469 3.5e-07 60.8 113 40.7


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