Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G061100 Manihot esculenta HOM05D006345 ORTHO05D007428 9.9e-149 530.0 256 100.0
CiPaw.01G263700 Carya illinoinensis HOM05D006345 ORTHO05D007428 3.7e-111 405.2 252 78.6
Sabra01G0052000 Salix brachista HOM05D006345 ORTHO05D007428 1.2e-109 400.2 255 76.1
QL08p052794 Quercus lobata HOM05D006345 ORTHO05D007428 1.6e-109 399.8 254 77.6
CSS0008102 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 2.6e-109 399.1 249 78.3
Nn3g17198 Nelumbo nucifera HOM05D006345 ORTHO05D007428 1.0e-108 397.1 255 74.1
Sed0017834 Sechium edule HOM05D006345 ORTHO05D007428 3.8e-108 395.2 252 75.8
TAR624G0710 Trochodendron aralioides HOM05D006345 ORTHO05D007428 1.9e-107 392.9 255 75.7
Potri.001G073700 Populus trichocarpa HOM05D006345 ORTHO05D007428 2.5e-107 392.5 255 75.7
Ciclev10016345m.g Citrus clementina HOM05D006345 ORTHO05D007428 4.2e-107 391.7 255 75.7
Rhsim13G0136400 Rhododendron simsii HOM05D006345 ORTHO05D007428 1.2e-106 390.2 256 75.4
Duzib212G0272 Durio zibethinus HOM05D006345 ORTHO05D007428 2.7e-106 389.0 249 77.5
ClCG02G007550 Citrullus lanatus HOM05D006345 ORTHO05D007428 8.0e-106 387.5 252 74.2
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.0e-105 387.1 255 73.3
Dinv19690 Davidia involucrata HOM05D006345 ORTHO05D007428 1.4e-105 386.7 256 74.2
Sed0021159 Sechium edule HOM05D006345 ORTHO05D007428 6.7e-105 384.4 252 75.0
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 8.8e-105 384.0 255 72.9
Prupe.4G121300 Prunus persica HOM05D006345 ORTHO05D007428 8.8e-105 384.0 242 77.7
Cpa.g.sc12.137 Carica papaya HOM05D006345 ORTHO05D007428 1.2e-104 383.6 254 74.0
RcHm_v2.0_Chr5g0022101 Rosa chinensis HOM05D006345 ORTHO05D007428 1.5e-104 383.3 255 73.3
MELO3C018575.2 Cucumis melo HOM05D006345 ORTHO05D007428 2.0e-104 382.9 252 73.0
Thecc.04G283900 Theobroma cacao HOM05D006345 ORTHO05D007428 2.0e-104 382.9 256 74.2
Aqoxy7G02153 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 4.4e-104 381.7 249 71.5
Cc09_g04580 Coffea canephora HOM05D006345 ORTHO05D007428 5.7e-104 381.3 251 72.5
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 5.7e-104 381.3 255 72.5
COL.COLO4_13882 Corchorus olitorius HOM05D006345 ORTHO05D007428 9.7e-104 380.6 256 73.8
CsaV3_7G007230 Cucumis sativus L. HOM05D006345 ORTHO05D007428 9.7e-104 380.6 252 72.6
FAN25G2350 Fragaria x ananassa HOM05D006345 ORTHO05D007428 2.8e-103 379.0 255 72.5
FAN16G3736 Fragaria x ananassa HOM05D006345 ORTHO05D007428 4.8e-103 378.3 255 72.5
PGR042G3945 Punica granatum HOM05D006345 ORTHO05D007428 4.8e-103 378.3 253 73.5
Cc06_g02140 Coffea canephora HOM05D006345 ORTHO05D007428 8.2e-103 377.5 256 70.7
Lalb_Chr07g0189941 Lupinus albus HOM05D006345 ORTHO05D007428 1.4e-102 376.7 254 73.2
Ca_19950_v3 Cicer arietinum L. HOM05D006345 ORTHO05D007428 7.0e-102 374.4 252 73.4
MD05G1242200 Malus domestica HOM05D006345 ORTHO05D007428 1.6e-101 373.2 242 75.6
Psat7g230920 Pisum sativum HOM05D006345 ORTHO05D007428 1.6e-101 373.2 254 70.9
Gorai.011G189500 Gossypium raimondii HOM05D006345 ORTHO05D007428 2.0e-101 372.9 256 71.5
arahy.Tifrunner.gnm1.ann1.S1VR06 Arachis hypogaea HOM05D006345 ORTHO05D007428 4.5e-101 371.7 251 72.9
Sc05g0003040 Simmondsia chinensis HOM05D006345 ORTHO05D007428 4.5e-101 371.7 252 70.6
Gohir.A10G163600 Gossypium hirsutum HOM05D006345 ORTHO05D007428 5.9e-101 371.3 249 73.1
Migut.D00572 Erythranthe guttata HOM05D006345 ORTHO05D007428 6.5e-100 367.9 256 68.8
TWI53G2073 Tripterygium wilfordii HOM05D006345 ORTHO05D007428 6.5e-100 367.9 255 70.2
Glyma.01G139633 Glycine max HOM05D006345 ORTHO05D007428 1.5e-99 366.7 253 72.7
MBI16_g30839_MAGBIO Magnolia biondii HOM05D006345 ORTHO05D007428 1.5e-99 366.7 245 72.7
arahy.Tifrunner.gnm1.ann1.G9BQRV Arachis hypogaea HOM05D006345 ORTHO05D007428 1.9e-99 366.3 251 72.5
Glyma.03G027700 Glycine max HOM05D006345 ORTHO05D007428 1.9e-99 366.3 253 71.9
DCAR_001254 Daucus carota HOM05D006345 ORTHO05D007428 2.5e-99 365.9 250 69.6
arahy.Tifrunner.gnm1.ann1.W97VC3 Arachis hypogaea HOM05D006345 ORTHO05D007428 3.2e-99 365.5 251 72.1
Gohir.D10G170000 Gossypium hirsutum HOM05D006345 ORTHO05D007428 3.2e-99 365.5 256 69.5
MSTRG.21400 Avicennia marina HOM05D006345 ORTHO05D007428 4.2e-99 365.2 257 71.2
Nitab4.5_0008647g0020 Nicotiana tabacum HOM05D006345 ORTHO05D007428 5.5e-99 364.8 222 77.0
arahy.Tifrunner.gnm1.ann1.P3RVZQ Arachis hypogaea HOM05D006345 ORTHO05D007428 9.4e-99 364.0 251 72.1
THA.LOC104822694 Tarenaya hassleriana HOM05D006345 ORTHO05D007428 2.1e-98 362.8 251 71.3
Lalb_Chr13g0291791 Lupinus albus HOM05D006345 ORTHO05D007428 2.7e-98 362.5 253 70.4
Nitab4.5_0001925g0110 Nicotiana tabacum HOM05D006345 ORTHO05D007428 2.7e-98 362.5 222 75.7
Phvul.003G037201 Phaseolus vulgaris HOM05D006345 ORTHO05D007428 2.7e-98 362.5 252 70.6
CiPaw.14G048700 Carya illinoinensis HOM05D006345 ORTHO05D007428 4.7e-98 361.7 234 75.6
TPR.G7580 Trifolium pratense HOM05D006345 ORTHO05D007428 6.1e-98 361.3 253 71.1
HanXRQChr14g0447431 Helianthus annuus HOM05D006345 ORTHO05D007428 8.0e-98 360.9 247 69.2
PSO675G7514 Papaver somniferum HOM05D006345 ORTHO05D007428 8.0e-98 360.9 262 68.7
Lj3g0013440 Lotus japonicus HOM05D006345 ORTHO05D007428 1.0e-97 360.5 252 71.8
ECA238G2485 Erigeron canadensis HOM05D006345 ORTHO05D007428 1.4e-97 360.1 248 69.4
Eucgr.F03783 Eucalyptus grandis HOM05D006345 ORTHO05D007428 5.2e-97 358.2 259 69.5
Peaxi162Scf00062g10131 Petunia axillaris HOM05D006345 ORTHO05D007428 5.2e-97 358.2 220 75.9
Medtr4g024860 Medicago truncatula HOM05D000001 ORTHO05D000003 8.8e-97 357.5 252 71.0
SalBow7G0027 Salvia bowleyana HOM05D006345 ORTHO05D007428 3.4e-96 355.5 253 68.8
Aa31LG8G650 Aethionema arabicum HOM05D006345 ORTHO05D007428 7.5e-96 354.4 250 68.8
Sopen12g034690 Solanum pennellii HOM05D006345 ORTHO05D007428 7.5e-96 354.4 221 75.6
PGSC0003DMG400023836 Solanum tuberosum HOM05D006345 ORTHO05D007428 7.5e-96 354.4 221 75.6
VMungo1383G2204 Vigna mungo HOM05D006345 ORTHO05D007428 7.5e-96 354.4 253 69.2
Aqoxy3G02382 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 9.8e-96 354.0 222 74.3
CAN.G575.62 Capsicum annuum HOM05D006345 ORTHO05D007428 9.8e-96 354.0 221 74.7
SalBow2G1193 Salvia bowleyana HOM05D006345 ORTHO05D007428 2.8e-95 352.4 220 74.1
PSO541G0968 Papaver somniferum HOM05D006345 ORTHO05D007428 3.1e-94 349.0 262 67.2
CANSAT11G1250 Cannabis sativa HOM05D006345 ORTHO05D007428 4.1e-94 348.6 217 76.5
Oeu012935.1 Olea europaea HOM05D006345 ORTHO05D007428 4.1e-94 348.6 221 75.6
EL10Ac3g05939 Beta vulgaris HOM05D006345 ORTHO05D007428 5.4e-94 348.2 256 65.6
Oeu017184.1 Olea europaea HOM05D006345 ORTHO05D007428 3.5e-93 345.5 221 75.6
SGA_v2.0_scaffold8G04616 Striga asiatica HOM05D006345 ORTHO05D007428 4.5e-93 345.1 249 65.5
unitig_52.g17581 Utricularia gibba HOM05D006345 ORTHO05D007428 1.0e-92 344.0 256 65.2
PSO782G3410 Papaver somniferum HOM05D006345 ORTHO05D007428 1.3e-92 343.6 222 76.6
AUR62015383 Chenopodium quinoa HOM05D006345 ORTHO05D007428 8.6e-92 340.9 256 64.5
AL3G25340 Arabidopsis lyrata HOM05D006345 ORTHO05D007428 9.5e-91 337.4 249 66.3
AT3G13440 Arabidopsis thaliana HOM05D006345 ORTHO05D007428 1.2e-90 337.0 249 65.9
Ah.07g202050 Amaranthus hybridus HOM05D006345 ORTHO05D007428 3.6e-90 335.5 256 63.3
Carub.0003s1288 Capsella rubella HOM05D006345 ORTHO05D007428 8.0e-90 334.3 216 73.1
Thhalv10021414m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 1.8e-89 333.2 218 72.0
Ah.15g099610 Amaranthus hybridus HOM05D006345 ORTHO05D007428 2.3e-89 332.8 256 62.9
BraA05t22416Z Brassica rapa HOM05D002140 ORTHO05D007428 8.9e-89 330.9 255 62.7
Carub.0006s3398 Capsella rubella HOM05D006345 ORTHO05D007428 8.9e-89 330.9 242 66.1
Lsat_1_v5_gn_3_103240 Lactuca sativa HOM05D006345 ORTHO05D007428 8.9e-89 330.9 216 72.7
A05p36090 Brassica napus HOM05D002140 ORTHO05D007428 7.5e-88 327.8 255 62.0
CDE04G1044 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 7.5e-88 327.8 251 65.7
CARHR088090 Cardamine hirsuta HOM05D006345 ORTHO05D007428 2.8e-87 325.9 218 71.1
BcaC09g48312 Brassica carinata HOM05D006345 ORTHO05D007428 3.7e-87 325.5 240 65.8
C01p51620 Brassica napus HOM05D006345 ORTHO05D007428 3.7e-87 325.5 240 65.8
BolC1t05105H Brassica oleracea HOM05D006345 ORTHO05D007428 3.7e-87 325.5 240 65.8
CDE06G0136 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 1.1e-86 323.9 211 72.0
C05p54470 Brassica napus HOM05D002140 ORTHO05D007428 3.1e-86 322.4 255 61.2
BcaB04g21015 Brassica carinata HOM05D006345 ORTHO05D007428 1.2e-85 320.5 249 65.1
SHI16738 Sapria himalayana HOM05D006345 ORTHO05D007428 1.2e-85 320.5 209 73.7
HPP92_018755 Vanilla planifolia HOM05D006345 ORTHO05D007428 1.6e-85 320.1 255 61.2
A01p40130 Brassica napus HOM05D006345 ORTHO05D007428 2.0e-85 319.7 240 64.6
Sp3g11640 Schrenkiella parvula HOM05D006345 ORTHO05D007428 2.0e-85 319.7 250 66.0
BcaC05g29179 Brassica carinata HOM05D002140 ORTHO05D007428 3.5e-85 318.9 240 65.0
BolC5t34114H Brassica oleracea HOM05D002140 ORTHO05D007428 3.5e-85 318.9 240 65.0
BraA01t04054Z Brassica rapa HOM05D006345 ORTHO05D007428 3.5e-85 318.9 240 64.2
ATR0561G247 Amborella trichopoda HOM05D006345 ORTHO05D007428 3.8e-84 315.5 249 61.8
Mapoly0069s0066 Marchantia polymorpha HOM05D006345 ORTHO05D007428 3.0e-81 305.8 246 61.4
Zm00001eb211470 Zea mays HOM05D006345 ORTHO05D007428 1.5e-80 303.5 246 61.4
Os03g0824200 Oryza sativa ssp. japonica HOM05D006345 ORTHO05D007428 2.0e-80 303.1 243 60.5
Lsat_1_v5_gn_2_63801 Lactuca sativa HOM05D006345 ORTHO05D007428 5.8e-80 301.6 249 61.4
Pp3c9_17440 Physcomitrium patens HOM05D006345 ORTHO05D007428 4.1e-78 295.4 249 59.4
Solyc12g100070.3 Solanum lycopersicum HOM05D006345 ORTHO05D007428 2.3e-76 289.7 185 72.4
SMO358G0200 Selaginella moellendorffii HOM05D006345 ORTHO05D007428 9.5e-75 284.3 208 62.0
Thhalv10009961m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 2.1e-74 283.1 224 63.8
CBR_g45447 Chara braunii HOM05D006345 ORTHO05D007428 4.7e-74 282.0 218 61.9
AagrBONN_evm.TU.Sc2ySwM_117.4015 Anthoceros agrestis HOM05D006345 ORTHO05D007428 1.4e-73 280.4 211 63.5
AUR62002307 Chenopodium quinoa HOM05D006345 ORTHO05D007428 1.4e-73 280.4 256 56.6
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 8.9e-65 251.1 185 66.5
SEGI_21458 Sequoiadendron giganteum HOM05D006345 ORTHO05D007428 4.4e-56 222.2 161 68.9
CSS0000171 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 2.4e-49 199.9 138 71.0
CAN.G1126.44 Capsicum annuum HOM05D006345 ORTHO05D007428 2.6e-48 196.4 158 62.0
Cre01.g036750 Chlamydomonas reinhardtii HOM05D006345 ORTHO05D007428 7.1e-46 188.3 214 46.3
Zm00001eb141630 Zea mays HOM05D006345 ORTHO05D007428 6.0e-45 185.3 144 63.9
Potri.003G157201 Populus trichocarpa HOM05D006345 ORTHO05D007428 6.0e-37 158.7 113 69.0
Sabra03G0114100 Salix brachista HOM05D000029 ORTHO05D000854 4.5e-32 142.5 191 43.5
MCO02G297 Micromonas commoda HOM05D006345 ORTHO05D007428 2.5e-30 136.7 170 44.1
Zm00001eb356470 Zea mays HOM05D006345 ORTHO05D007428 7.9e-29 131.7 98 66.3
ATR0006G036 Amborella trichopoda HOM05D006345 ORTHO05D007428 2.7e-13 80.1 50 72.0
Lj1P1152T38 Lonicera japonica HOM05D006345 ORTHO05D007428 2.0e-11 73.9 44 75.0


User provided reference genes

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