Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G059350 Manihot esculenta HOM05D000429 ORTHO05D000352 1.8e-60 235.7 117 100.0
Manes.16G049870 Manihot esculenta HOM05D000429 ORTHO05D000352 4.5e-32 141.4 105 65.7
Manes.18G146801 Manihot esculenta HOM05D000429 ORTHO05D000352 8.6e-23 110.5 67 77.6
Manes.18G141017 Manihot esculenta HOM05D000429 ORTHO05D000352 1.9e-22 109.4 73 78.1
Manes.13G092480 Manihot esculenta HOM05D000429 ORTHO05D000352 4.7e-21 104.8 74 71.6
Manes.01G082850 Manihot esculenta HOM05D000429 ORTHO05D000352 2.0e-19 99.4 67 70.1
Manes.13G092290 Manihot esculenta HOM05D000429 ORTHO05D000352 3.4e-19 98.6 66 75.8
Manes.04G060101 Manihot esculenta HOM05D000429 ORTHO05D000352 7.5e-19 97.4 69 72.5
Manes.05G115092 Manihot esculenta HOM05D000429 ORTHO05D000352 5.4e-17 91.3 58 79.3
Manes.18G145610 Manihot esculenta HOM05D000429 ORTHO05D000352 7.0e-17 90.9 60 73.3
Manes.13G077768 Manihot esculenta HOM05D000429 ORTHO05D000352 9.2e-17 90.5 67 67.2
Manes.15G107550 Manihot esculenta HOM05D000429 ORTHO05D000352 1.6e-16 89.7 59 72.9
Manes.11G076151 Manihot esculenta HOM05D000429 ORTHO05D000352 1.5e-14 83.2 71 62.0
Manes.09G078108 Manihot esculenta HOM05D000429 ORTHO05D000352 2.5e-14 82.4 76 51.3
Manes.07G030402 Manihot esculenta HOM05D000429 ORTHO05D000352 3.3e-14 82.0 51 76.5
Manes.16G047550 Manihot esculenta HOM05D000429 ORTHO05D000352 8.1e-13 77.4 50 76.0
Oeu044645.1 Olea europaea HOM05D000429 ORTHO05D000352 1.1e-09 67.0 91 34.1
Oeu033863.1 Olea europaea HOM05D000429 ORTHO05D000352 1.9e-09 66.2 97 33.0
Oeu057937.1 Olea europaea HOM05D000429 ORTHO05D000352 4.1e-09 65.1 91 34.1
Oeu058894.1 Olea europaea HOM05D000047 ORTHO05D008058 4.1e-09 65.1 91 34.1
Oeu064691.1 Olea europaea HOM05D000429 ORTHO05D000352 4.1e-09 65.1 91 34.1
arahy.Tifrunner.gnm1.ann1.UC2LFY Arachis hypogaea HOM05D000429 ORTHO05D000352 5.4e-09 64.7 93 31.2
Oeu043216.1 Olea europaea HOM05D000429 ORTHO05D000352 7.1e-09 64.3 97 32.0
Oeu037482.1 Olea europaea HOM05D000429 ORTHO05D000352 1.2e-08 63.5 88 33.0
arahy.Tifrunner.gnm1.ann1.E3E3WX Arachis hypogaea HOM05D000429 ORTHO05D000352 1.6e-08 63.2 86 34.9
arahy.Tifrunner.gnm1.ann1.99K3J2 Arachis hypogaea HOM05D000047 ORTHO05D000044 2.7e-08 62.4 93 31.2
Manes.05G115333 Manihot esculenta HOM05D000429 ORTHO05D000352 3.5e-08 62.0 36 80.6
Oeu045230.1 Olea europaea HOM05D000047 ORTHO05D000044 1.0e-07 60.5 94 31.9
CANSAT21G1062 Cannabis sativa HOM05D000429 ORTHO05D000352 1.3e-07 60.1 77 39.0
Oeu004063.1 Olea europaea HOM05D000429 ORTHO05D000352 1.7e-07 59.7 90 32.2
CSS0014631 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 3.0e-07 58.9 84 33.3
CSS0037010 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 3.9e-07 58.5 99 34.3
Oeu060432.1 Olea europaea HOM05D000047 ORTHO05D000044 3.9e-07 58.5 102 30.4
CANSAT11G0599 Cannabis sativa HOM05D000429 ORTHO05D000352 5.1e-07 58.2 76 38.2
CSS0028604 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 6.6e-07 57.8 84 32.1
CSS0046711 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 6.6e-07 57.8 84 32.1
Oeu033492.1 Olea europaea HOM05D000047 ORTHO05D008058 6.6e-07 57.8 94 31.9
CSS0008580 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 8.6e-07 57.4 84 33.3
CANSAT01G2525 Cannabis sativa HOM05D000429 ORTHO05D000352 1.1e-06 57.0 91 38.5
CANSAT54G1661 Cannabis sativa HOM05D000429 ORTHO05D000352 1.1e-06 57.0 90 34.4
CANSAT21G1212 Cannabis sativa HOM05D008422 ORTHO05D000352 3.3e-06 55.5 82 36.6
CANSAT56G4516 Cannabis sativa HOM05D000429 ORTHO05D000352 4.3e-06 55.1 78 37.2
Oeu038088.4 Olea europaea HOM05D000429 ORTHO05D000352 4.3e-06 55.1 94 28.7
CSS0021795 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 5.6e-06 54.7 84 31.0
CSS0029853 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 5.6e-06 54.7 84 31.0
CSS0043404 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 5.6e-06 54.7 84 31.0
CANSAT11G2636 Cannabis sativa HOM05D000429 ORTHO05D000352 5.6e-06 54.7 78 37.2
DCAR_031921 Daucus carota HOM05D000047 ORTHO05D000044 5.6e-06 54.7 77 35.1
CANSAT11G1830 Cannabis sativa HOM05D000429 ORTHO05D000352 7.3e-06 54.3 77 36.4
CANSAT35G1116 Cannabis sativa HOM05D000429 ORTHO05D000352 7.3e-06 54.3 78 37.2
AUR62044001 Chenopodium quinoa HOM05D000429 ORTHO05D000352 7.3e-06 54.3 98 31.6
Oeu018836.1 Olea europaea HOM05D000429 ORTHO05D000352 7.3e-06 54.3 92 31.5
Oeu064652.1 Olea europaea HOM05D000429 ORTHO05D000352 7.3e-06 54.3 73 35.6
CSS0002712 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 9.5e-06 53.9 84 32.1
CSS0043325 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 9.5e-06 53.9 84 32.1
CANSAT25G0964 Cannabis sativa HOM05D000047 ORTHO05D000352 9.5e-06 53.9 81 34.6
CANSAT35G0743 Cannabis sativa HOM05D000429 ORTHO05D000352 9.5e-06 53.9 117 31.6
Potri.006G157801 Populus trichocarpa HOM05D000429 ORTHO05D000352 9.5e-06 53.9 105 33.3


User provided reference genes

Program Settings