Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G058404 Manihot esculenta HOM05D000002 ORTHO05D000047 5.6e-55 217.2 101 100.0
Manes.13G089634 Manihot esculenta HOM05D000002 ORTHO05D000047 1.8e-21 105.9 64 73.4
Manes.13G000072 Manihot esculenta HOM05D000002 ORTHO05D000047 9.1e-21 103.6 64 75.0
Manes.04G101050 Manihot esculenta HOM05D000002 ORTHO05D000047 9.4e-18 93.6 50 84.0
Manes.13G071301 Manihot esculenta HOM05D000002 ORTHO05D000047 6.1e-17 90.9 71 62.0
Hma1.2p1_0281F.1_g113140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.3e-14 80.9 66 51.5
Oeu010223.1 Olea europaea HOM05D000002 ORTHO05D000047 8.2e-14 80.5 65 60.0
CSS0049957 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-12 76.3 64 51.6
Sabra11G0020700 Salix brachista HOM05D000002 ORTHO05D000047 1.6e-12 76.3 59 55.9
Hma1.2p1_0308F.1_g120220 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.5e-12 74.7 47 63.8
Hma1.2p1_1543F.1_g289840 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.3e-11 73.2 54 53.7
CSS0013767 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.8e-11 71.6 48 58.3
CSS0014458 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.5e-11 70.9 65 52.3
RcHm_v2.0_Chr3g0450981 Rosa chinensis HOM05D000002 ORTHO05D000047 6.5e-11 70.9 68 47.1
RcHm_v2.0_Chr3g0460001 Rosa chinensis HOM05D000002 ORTHO05D000047 6.5e-11 70.9 68 47.1
ECA238G4452 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-10 70.1 69 44.9
Sopen04g009810 Solanum pennellii HOM05D000002 ORTHO05D000047 2.5e-10 68.9 80 38.8
CSS0021782 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-10 68.2 48 56.2
Sopen04g009510 Solanum pennellii HOM05D000014 ORTHO05D000016 5.5e-10 67.8 67 47.8
CSS0002445 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.2e-10 67.4 48 56.2
ECA238G0736 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.2e-10 67.4 69 44.9
Atru.chr3.2232 Acer truncatum HOM05D000002 ORTHO05D000001 2.7e-09 65.5 38 57.9
RcHm_v2.0_Chr3g0451051 Rosa chinensis HOM05D000002 ORTHO05D000001 6.1e-09 64.3 77 35.1
Sabra16G0094000 Salix brachista HOM05D000179 ORTHO05D000107 5.2e-08 61.2 73 41.1
RcHm_v2.0_Chr4g0410841 Rosa chinensis HOM05D000002 ORTHO05D000001 6.7e-08 60.8 49 51.0
RcHm_v2.0_Chr5g0078371 Rosa chinensis HOM05D000002 ORTHO05D000001 8.8e-08 60.5 48 52.1
RcHm_v2.0_Chr6g0300481 Rosa chinensis HOM05D000002 ORTHO05D000001 8.8e-08 60.5 49 51.0
Hma1.2p1_1591F.1_g292490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-07 60.1 53 41.5
Sabra17G0052200 Salix brachista HOM05D003029 ORTHO05D003413 3.3e-07 58.5 74 40.5
Sabra11G0023800 Salix brachista HOM05D000002 ORTHO05D000047 4.4e-07 58.2 33 60.6
TWI12G0032 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 5.7e-07 57.8 78 35.9
Sabra05G0034800 Salix brachista HOM05D000002 ORTHO05D000047 9.7e-07 57.0 33 57.6
Sabra09G0051700 Salix brachista HOM05D000002 ORTHO05D000047 9.7e-07 57.0 33 57.6
Sabra10G0088600 Salix brachista HOM05D000002 ORTHO05D000047 9.7e-07 57.0 33 57.6
Hma1.2p1_0017F.1_g011450 Hydrangea macrophylla HOM05D000149 ORTHO05D000047 2.8e-06 55.5 57 38.6
QL05p076832 Quercus lobata HOM05D000002 ORTHO05D000001 2.8e-06 55.5 33 57.6


User provided reference genes

Program Settings