Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G057400 Manihot esculenta HOM05D007940 ORTHO05D010046 9.1e-50 199.9 99 100.0
Manes.16G056500 Manihot esculenta HOM05D007940 ORTHO05D010046 1.5e-47 192.6 99 94.9
Prupe.4G111600 Prunus persica HOM05D007940 ORTHO05D010046 2.1e-30 135.6 90 70.0
MD05G1252500 Malus domestica HOM05D007940 ORTHO05D010046 8.9e-29 130.2 87 70.1
Nn7g38154 Nelumbo nucifera HOM05D007940 ORTHO05D010046 1.2e-28 129.8 80 73.8
MD10G1233500 Malus domestica HOM05D007940 ORTHO05D010046 2.6e-28 128.6 87 69.0
Thecc.06G142100 Theobroma cacao HOM05D007940 ORTHO05D010046 4.4e-28 127.9 81 71.6
Sabra15G0137900 Salix brachista HOM05D007940 ORTHO05D010046 2.2e-27 125.6 83 68.7
TWI38G0312 Tripterygium wilfordii HOM05D007940 ORTHO05D010046 2.2e-27 125.6 79 74.7
Duzib235G0199 Durio zibethinus HOM05D007940 ORTHO05D010046 2.9e-27 125.2 89 66.3
Potri.015G121500 Populus trichocarpa HOM05D007940 ORTHO05D010046 3.7e-27 124.8 83 68.7
Eucgr.D01043 Eucalyptus grandis HOM05D007940 ORTHO05D010046 6.4e-27 124.0 81 74.1
RcHm_v2.0_Chr5g0020061 Rosa chinensis HOM05D007940 ORTHO05D010046 6.4e-27 124.0 81 70.4
Sc16g0011710 Simmondsia chinensis HOM05D007940 ORTHO05D010046 6.4e-27 124.0 83 68.7
Cc09_g06150 Coffea canephora HOM05D007940 ORTHO05D010046 7.0e-26 120.6 94 60.6
Atru.chr10.309 Acer truncatum HOM05D007940 ORTHO05D010046 9.2e-26 120.2 78 73.1
SalBow6G6284 Salvia bowleyana HOM05D007940 ORTHO05D010046 9.2e-26 120.2 85 64.7
SalBow8G3130 Salvia bowleyana HOM05D007940 ORTHO05D010046 9.2e-26 120.2 85 64.7
DCAR_003782 Daucus carota HOM05D007940 ORTHO05D010046 1.2e-25 119.8 88 61.4
FAN16G1222 Fragaria x ananassa HOM05D007940 ORTHO05D010046 1.2e-25 119.8 81 70.4
Hma1.2p1_0040F.1_g025155 Hydrangea macrophylla HOM05D007940 ORTHO05D010046 1.2e-25 119.8 82 69.5
Sopen11g010730 Solanum pennellii HOM05D007940 ORTHO05D010046 2.0e-25 119.0 87 64.4
Actinidia33707 Actinidia chinensis HOM05D007940 ORTHO05D010046 2.7e-25 118.6 79 69.6
Migut.M01978 Erythranthe guttata HOM05D007940 ORTHO05D010046 2.7e-25 118.6 90 63.3
Solyc11g020710.2 Solanum lycopersicum HOM05D007940 ORTHO05D010046 2.7e-25 118.6 87 64.4
SGA_v2.0_scaffold298G47684 Striga asiatica HOM05D007940 ORTHO05D010046 2.7e-25 118.6 79 65.8
Oeu008726.1 Olea europaea HOM05D007940 ORTHO05D010046 3.5e-25 118.2 82 64.6
Ah.06g193510 Amaranthus hybridus HOM05D007940 ORTHO05D010046 4.6e-25 117.9 81 64.2
Medtr2g435250 Medicago truncatula HOM05D007940 ORTHO05D010046 1.0e-24 116.7 85 63.5
Aqoxy3G00719 Aquilegia oxysepala HOM05D007940 ORTHO05D010046 2.3e-24 115.5 88 58.0
Lalb_Chr07g0188831 Lupinus albus HOM05D007940 ORTHO05D010046 3.0e-24 115.2 84 64.3
QL11p017779 Quercus lobata HOM05D007940 ORTHO05D010046 3.0e-24 115.2 79 67.1
CSS0023427 Camellia sinensis var. sinensis HOM05D007940 ORTHO05D010046 3.9e-24 114.8 73 75.3
FAN21G0368 Fragaria x ananassa HOM05D007940 ORTHO05D010046 8.6e-24 113.6 81 69.1
HPP92_017565 Vanilla planifolia HOM05D007940 ORTHO05D010046 8.6e-24 113.6 87 62.1
BcaC05g27148 Brassica carinata HOM05D007940 ORTHO05D010046 1.5e-23 112.8 81 63.0
BcaC09g51575 Brassica carinata HOM05D007940 ORTHO05D010046 1.5e-23 112.8 81 63.0
BolC1t01151H Brassica oleracea HOM05D007940 ORTHO05D010046 1.5e-23 112.8 81 63.0
A09p35060 Brassica napus HOM05D007940 ORTHO05D010046 2.5e-23 112.1 81 63.0
BraA09t39037Z Brassica rapa HOM05D007940 ORTHO05D010046 2.5e-23 112.1 81 63.0
HanXRQChr04g0109371 Helianthus annuus HOM05D007940 ORTHO05D010046 3.3e-23 111.7 89 55.1
Lsat_1_v5_gn_5_23140 Lactuca sativa HOM05D007940 ORTHO05D010046 3.3e-23 111.7 89 55.1
AL1G49310 Arabidopsis lyrata HOM05D007940 ORTHO05D010046 4.3e-23 111.3 81 63.0
AT1G31175 Arabidopsis thaliana HOM05D007940 ORTHO05D010046 4.3e-23 111.3 81 63.0
BcaB07g32779 Brassica carinata HOM05D007940 ORTHO05D010046 4.3e-23 111.3 81 63.0
Cfa019394 Carpinus fangiana HOM05D007940 ORTHO05D010046 4.3e-23 111.3 79 67.1
Aa31LG2G15120 Aethionema arabicum HOM05D007940 ORTHO05D010046 7.3e-23 110.5 79 63.3
CARHR030670 Cardamine hirsuta HOM05D007940 ORTHO05D010046 7.3e-23 110.5 89 59.6
ClCG01G009440 Citrullus lanatus HOM05D007940 ORTHO05D010046 7.3e-23 110.5 79 65.8
Carub.0001s2958 Capsella rubella HOM05D007940 ORTHO05D010046 9.5e-23 110.2 79 64.6
MELO3C021755.2 Cucumis melo HOM05D007940 ORTHO05D010046 9.5e-23 110.2 79 64.6
Thhalv10009859m.g Eutrema salsugineum HOM05D007940 ORTHO05D010046 9.5e-23 110.2 88 58.0
Sp1g27000 Schrenkiella parvula HOM05D007940 ORTHO05D010046 9.5e-23 110.2 79 63.3
Psat1g156840 Pisum sativum HOM05D007940 ORTHO05D010046 1.6e-22 109.4 81 63.0
Ca_01891_v3 Cicer arietinum L. HOM05D007940 ORTHO05D010046 2.1e-22 109.0 81 63.0
Glyma.15G146300 Glycine max HOM05D007940 ORTHO05D010046 4.7e-22 107.8 82 62.2
CANSAT35G1488 Cannabis sativa HOM05D007940 ORTHO05D010046 1.1e-21 106.7 84 60.7
Phvul.009G252500 Phaseolus vulgaris HOM05D007940 ORTHO05D010046 1.1e-21 106.7 79 60.8
TPR.G22024 Trifolium pratense HOM05D007940 ORTHO05D010046 1.1e-21 106.7 81 60.5
Sed0008509 Sechium edule HOM05D007940 ORTHO05D010046 1.8e-21 105.9 79 63.3
COL.COLO4_30989 Corchorus olitorius HOM05D007940 ORTHO05D010046 2.3e-21 105.5 87 55.2
Os07g0567500 Oryza sativa ssp. japonica HOM05D007940 ORTHO05D010046 2.3e-21 105.5 89 59.6
THA.LOC104798551 Tarenaya hassleriana HOM05D007940 ORTHO05D010046 3.1e-21 105.1 79 64.6
Zm00001eb107160 Zea mays HOM05D007940 ORTHO05D010046 5.2e-21 104.4 89 57.3
MBI02_g13338_MAGBIO Magnolia biondii HOM05D007940 ORTHO05D010046 2.0e-20 102.4 71 67.6
EL10Ac4g10315 Beta vulgaris HOM05D007940 ORTHO05D010046 3.4e-20 101.7 73 61.6
Gohir.D05G147600 Gossypium hirsutum HOM05D007940 ORTHO05D010046 6.4e-19 97.4 81 56.8
Ciclev10017318m.g Citrus clementina HOM05D007940 ORTHO05D010046 9.2e-18 93.6 77 61.0
Gorai.009G151700 Gossypium raimondii HOM05D007940 ORTHO05D010046 9.2e-18 93.6 81 55.6
Gohir.D05G147732 Gossypium hirsutum HOM05D007940 ORTHO05D010046 2.0e-17 92.4 81 54.3
PSO675G1966 Papaver somniferum HOM05D007940 ORTHO05D010046 1.0e-16 90.1 61 63.9
TAR624G1282 Trochodendron aralioides HOM05D007940 ORTHO05D010046 5.8e-12 74.3 62 54.8
Mapoly0019s0110 Marchantia polymorpha HOM05D007940 ORTHO05D010046 2.4e-10 68.9 76 44.7
CBR_g28534 Chara braunii HOM05D007940 ORTHO05D010046 1.2e-09 66.6 89 42.7
CsaV3_1G046330 Cucumis sativus L. HOM05D007940 ORTHO05D010046 2.7e-09 65.5 48 58.3
SMO347G0336 Selaginella moellendorffii HOM05D007940 ORTHO05D010046 7.8e-09 63.9 79 39.2


User provided reference genes

Program Settings