Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G057209 Manihot esculenta HOM05D000003 ORTHO05D000006 2.9e-63 245.0 117 100.0
CSS0038721 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.3e-14 82.0 115 40.9
CSS0033111 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.6e-13 78.6 112 35.7
CSS0010630 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.1e-12 77.0 112 35.7
CSS0041297 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.1e-12 77.0 112 34.8
CSS0039300 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.4e-12 76.6 112 36.6
CSS0036156 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 2.6e-11 72.4 77 41.6
CSS0007993 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 3.4e-11 72.0 79 40.5
Thecc.05G279300 Theobroma cacao HOM05D012808 ORTHO05D000006 3.4e-11 72.0 113 33.6
CSS0039659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.8e-11 71.2 112 36.6
CSS0030478 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 7.5e-11 70.9 113 34.5
CSS0005580 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 9.9e-11 70.5 90 38.9
CSS0018071 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 1.3e-10 70.1 80 41.2
CSS0030282 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 2.9e-10 68.9 75 44.0
CSS0046923 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.9e-10 68.9 90 38.9
CSS0006902 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 4.9e-10 68.2 77 42.9
CSS0015394 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.4e-10 67.8 112 31.2
Medtr6g016175 Medicago truncatula HOM05D000003 ORTHO05D000006 8.3e-10 67.4 113 36.3
PSO017G6159 Papaver somniferum HOM05D000003 ORTHO05D000006 1.1e-09 67.0 112 32.1
CSS0045024 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 1.9e-09 66.2 72 43.1
Potri.003G010697 Populus trichocarpa HOM05D000003 ORTHO05D000006 5.4e-09 64.7 117 38.5
CiPaw.08G057000 Carya illinoinensis HOM05D000003 ORTHO05D000006 7.1e-09 64.3 83 39.8
ClCG03G010470 Citrullus lanatus HOM05D000003 ORTHO05D000004 7.1e-09 64.3 96 34.4
Atru.chr4.2177 Acer truncatum HOM05D000003 ORTHO05D000004 9.2e-09 63.9 83 42.2
CSS0024915 Camellia sinensis var. sinensis HOM05D013965 ORTHO05D000006 9.2e-09 63.9 75 40.0
CiPaw.03G000600 Carya illinoinensis HOM05D000003 ORTHO05D000006 9.2e-09 63.9 97 39.2
Hund22684 Selenicereus undatus HOM05D001165 ORTHO05D000006 9.2e-09 63.9 88 34.1
TPR.G18505 Trifolium pratense HOM05D000003 ORTHO05D000004 9.2e-09 63.9 113 30.1
Aqoxy6G01768 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.6e-08 63.2 113 33.6
CiPaw.12G024400 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.6e-08 63.2 103 35.9
PSO724G1127 Papaver somniferum HOM05D000003 ORTHO05D000006 1.6e-08 63.2 112 32.1
CiPaw.06G120200 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.1e-08 62.8 81 39.5
Lj1g0006455 Lotus japonicus HOM05D000003 ORTHO05D000006 2.1e-08 62.8 84 33.3
PSO782G5504 Papaver somniferum HOM05D000003 ORTHO05D000006 2.1e-08 62.8 113 33.6
CiPaw.01G031000 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.7e-08 62.4 98 33.7
CiPaw.01G094800 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.7e-08 62.4 98 33.7
CiPaw.02G060000 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.7e-08 62.4 98 36.7
CiPaw.05G121300 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.7e-08 62.4 97 37.1
CiPaw.15G041600 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.7e-08 62.4 98 33.7
TPR.G35686 Trifolium pratense HOM05D000003 ORTHO05D000006 2.7e-08 62.4 77 37.7
CiPaw.13G122400 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.5e-08 62.0 78 41.0
PSO170G3741 Papaver somniferum HOM05D000003 ORTHO05D000006 3.5e-08 62.0 112 31.2
PSO832G2789 Papaver somniferum HOM05D000003 ORTHO05D000006 3.5e-08 62.0 113 31.0
Atru.chr2.2565 Acer truncatum HOM05D000003 ORTHO05D000004 4.6e-08 61.6 115 36.5
CSS0040117 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.6e-08 61.6 112 29.5
CiPaw.06G060200 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.6e-08 61.6 81 39.5
CSS0004372 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.0e-08 61.2 112 29.5
CiPaw.04G081300 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.0e-08 61.2 99 34.3
CiPaw.10G022700 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.0e-08 61.2 98 31.6
CiPaw.01G225900 Carya illinoinensis HOM05D000003 ORTHO05D000006 7.8e-08 60.8 78 39.7
CiPaw.05G173100 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.3e-07 60.1 114 34.2
CiPaw.06G163400 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.3e-07 60.1 98 34.7
CiPaw.09G124600 Carya illinoinensis HOM05D000003 ORTHO05D000006 1.3e-07 60.1 79 38.0
COL.COLO4_19781 Corchorus olitorius HOM05D000003 ORTHO05D000006 1.3e-07 60.1 86 40.7
PSO017G1919 Papaver somniferum HOM05D000003 ORTHO05D000006 1.3e-07 60.1 83 33.7
Atru.chr4.2769 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-07 59.7 113 30.1
Aqoxy6G00553 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.7e-07 59.7 112 32.1
CiPaw.12G035200 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.3e-07 59.3 78 39.7
COL.COLO4_26422 Corchorus olitorius HOM05D000003 ORTHO05D000006 2.3e-07 59.3 114 33.3
Atru.chr3.2964 Acer truncatum HOM05D000003 ORTHO05D000006 3.0e-07 58.9 94 37.2
CSS0013913 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.0e-07 58.9 85 35.3
CiPaw.01G208000 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.0e-07 58.9 78 38.5
CiPaw.07G008100 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.0e-07 58.9 98 31.6
CiPaw.11G178800 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.0e-07 58.9 96 35.4
ClCG04G012890 Citrullus lanatus HOM05D000003 ORTHO05D000004 3.0e-07 58.9 96 32.3
CiPaw.03G074300 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.9e-07 58.5 98 32.7
Gohir.A08G056950 Gossypium hirsutum HOM05D000003 ORTHO05D000006 3.9e-07 58.5 93 33.3
Manes.06G022000 Manihot esculenta HOM05D000003 ORTHO05D000006 3.9e-07 58.5 45 55.6
PSO017G2762 Papaver somniferum HOM05D000003 ORTHO05D000006 3.9e-07 58.5 113 32.7
PSO104G0116 Papaver somniferum HOM05D000003 ORTHO05D000006 3.9e-07 58.5 111 31.5
Atru.chr3.3329 Acer truncatum HOM05D000003 ORTHO05D002259 5.1e-07 58.2 91 35.2
CANSAT56G3205 Cannabis sativa HOM05D000003 ORTHO05D000006 5.1e-07 58.2 78 39.7
CiPaw.03G231100 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.1e-07 58.2 98 31.6
CiPaw.05G158600 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.1e-07 58.2 114 30.7
CiPaw.06G024700 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.1e-07 58.2 98 31.6
CiPaw.06G165800 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.1e-07 58.2 98 30.6
CiPaw.14G112600 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.1e-07 58.2 114 30.7
PSO356G0004 Papaver somniferum HOM05D000003 ORTHO05D000006 5.1e-07 58.2 114 29.8
Atru.chr6.308 Acer truncatum HOM05D000003 ORTHO05D000006 6.6e-07 57.8 83 34.9
PSO210G4273 Papaver somniferum HOM05D000003 ORTHO05D000006 6.6e-07 57.8 115 31.3
Phvul.010G087401 Phaseolus vulgaris HOM05D000003 ORTHO05D000006 6.6e-07 57.8 77 36.4
Potri.013G148950 Populus trichocarpa HOM05D000003 ORTHO05D000006 6.6e-07 57.8 113 31.0
Atru.chr10.907 Acer truncatum HOM05D000003 ORTHO05D000004 8.6e-07 57.4 113 28.3
Duzib147G1219 Durio zibethinus HOM05D000003 ORTHO05D000006 8.6e-07 57.4 117 29.9
MBI11_g04262_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 8.6e-07 57.4 112 32.1
Duzib147G1313 Durio zibethinus HOM05D000003 ORTHO05D000006 1.1e-06 57.0 95 32.6
HanXRQChr13g0401811 Helianthus annuus HOM05D000003 ORTHO05D000004 1.1e-06 57.0 84 36.9
PSO210G5568 Papaver somniferum HOM05D000003 ORTHO05D000006 1.1e-06 57.0 112 33.0
CSS0017637 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.5e-06 56.6 112 31.2
ClCG08G009300 Citrullus lanatus HOM05D000003 ORTHO05D000006 1.5e-06 56.6 87 34.5
MBI19_g24071_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 1.9e-06 56.2 123 30.9
PSO339G2808 Papaver somniferum HOM05D000003 ORTHO05D000006 1.9e-06 56.2 83 30.1
Medtr3g022950 Medicago truncatula HOM05D008558 ORTHO05D011658 2.5e-06 55.8 113 30.1
CiPaw.06G176400 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.3e-06 55.5 98 29.6
CiPaw.07G117200 Carya illinoinensis HOM05D000003 ORTHO05D000006 3.3e-06 55.5 98 32.7
SEGI_02919 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 3.3e-06 55.5 76 39.5
CiPaw.06G055400 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.3e-06 55.1 83 34.9
PSO063G5487 Papaver somniferum HOM05D000003 ORTHO05D000006 4.3e-06 55.1 114 29.8
Glyma.06G180900 Glycine max HOM05D000003 ORTHO05D000006 5.6e-06 54.7 76 36.8
PSO063G1041 Papaver somniferum HOM05D000003 ORTHO05D000006 5.6e-06 54.7 115 28.7
QL03p046628 Quercus lobata HOM05D000003 ORTHO05D000006 5.6e-06 54.7 77 36.4
HanXRQChr05g0136121 Helianthus annuus HOM05D000003 ORTHO05D000004 7.3e-06 54.3 88 33.0
MBI04_g29857_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 7.3e-06 54.3 86 34.9
RcHm_v2.0_Chr2g0146151 Rosa chinensis HOM05D000003 ORTHO05D000006 7.3e-06 54.3 84 35.7
Atru.chr2.1089 Acer truncatum HOM05D000003 ORTHO05D002259 9.5e-06 53.9 80 35.0
Cpa.g.sc29.11 Carica papaya HOM05D000003 ORTHO05D000006 9.5e-06 53.9 99 32.3
Cpa.g.sc7.211 Carica papaya HOM05D000003 ORTHO05D000006 9.5e-06 53.9 99 32.3


User provided reference genes

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