Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 2.1e-97 359.0 174 100.0
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 2.5e-66 255.8 174 73.6
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 1.9e-63 246.1 176 69.3
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 6.9e-61 237.7 172 71.5
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 9.1e-61 237.3 172 67.4
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 1.5e-60 236.5 177 66.1
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 7.7e-60 234.2 174 64.9
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 7.7e-60 234.2 148 74.3
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 2.9e-59 232.3 173 64.7
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 5.0e-59 231.5 178 66.3
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 1.4e-58 229.9 170 67.1
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 1.4e-58 229.9 138 76.8
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 1.4e-58 229.9 170 68.2
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 2.5e-58 229.2 138 75.4
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 7.2e-58 227.6 167 62.9
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 1.2e-57 226.9 175 64.0
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 1.6e-57 226.5 149 69.1
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 1.6e-57 226.5 167 66.5
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 3.6e-57 225.3 133 78.2
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 4.7e-57 224.9 168 63.1
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 4.7e-57 224.9 176 63.1
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 6.1e-57 224.6 173 63.0
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 7.9e-57 224.2 135 77.0
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 7.9e-57 224.2 173 64.2
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 1.4e-56 223.4 178 61.8
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 3.0e-56 222.2 168 67.3
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 3.9e-56 221.9 165 65.5
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 3.9e-56 221.9 147 70.1
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 5.1e-56 221.5 165 65.5
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 6.7e-56 221.1 165 64.8
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 6.7e-56 221.1 173 61.3
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 6.7e-56 221.1 131 77.1
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 8.8e-56 220.7 136 75.7
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 1.1e-55 220.3 140 74.3
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 1.1e-55 220.3 135 76.3
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 2.0e-55 219.5 125 80.0
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 2.0e-55 219.5 179 63.1
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 2.0e-55 219.5 139 75.5
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 2.0e-55 219.5 139 75.5
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 2.6e-55 219.2 150 68.0
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 3.3e-55 218.8 168 61.3
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 3.3e-55 218.8 168 61.3
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 3.3e-55 218.8 141 70.9
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 3.3e-55 218.8 159 65.4
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 5.7e-55 218.0 165 64.8
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 5.7e-55 218.0 142 71.1
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 7.4e-55 217.6 138 73.2
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 7.4e-55 217.6 142 71.1
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 1.3e-54 216.9 127 78.0
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 1.7e-54 216.5 162 64.2
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 2.2e-54 216.1 181 60.2
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 2.2e-54 216.1 173 62.4
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 4.8e-54 214.9 165 64.2
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 8.2e-54 214.2 173 61.3
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 8.2e-54 214.2 165 64.2
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 8.2e-54 214.2 172 61.6
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 1.1e-53 213.8 173 61.3
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 1.8e-53 213.0 217 55.3
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 5.3e-53 211.5 168 59.5
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 9.1e-53 210.7 170 59.4
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 9.1e-53 210.7 128 75.8
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 9.1e-53 210.7 168 60.1
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 1.2e-52 210.3 137 70.1
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 1.5e-52 209.9 184 61.4
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 1.5e-52 209.9 169 59.8
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 3.4e-52 208.8 174 57.5
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 3.4e-52 208.8 161 64.6
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 1.7e-51 206.5 169 60.9
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 1.4e-50 203.4 121 77.7
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 1.9e-50 203.0 144 62.5
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 2.5e-50 202.6 170 61.8
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 2.1e-49 199.5 154 64.9
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 2.1e-49 199.5 154 63.0
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 2.7e-49 199.1 227 49.3
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 6.1e-49 198.0 135 68.9
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 2.3e-48 196.1 105 82.9
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 8.8e-48 194.1 155 63.2
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 5.7e-47 191.4 133 67.7
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 5.7e-47 191.4 175 57.1
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 5.7e-47 191.4 124 71.0
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 1.3e-46 190.3 98 83.7
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 2.2e-46 189.5 177 54.2
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 9.1e-45 184.1 145 62.8
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 2.6e-44 182.6 110 74.5
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 4.5e-44 181.8 100 77.0
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 2.2e-43 179.5 102 75.5
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 1.6e-41 173.3 112 67.9
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 7.5e-39 164.5 109 71.6
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 7.5e-39 164.5 92 75.0
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 3.1e-37 159.1 132 57.6
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 1.7e-35 153.3 119 62.2
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 3.8e-35 152.1 101 66.3
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 2.5e-34 149.4 110 60.0
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 2.1e-33 146.4 142 51.4
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 2.1e-33 146.4 133 57.1
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 1.7e-30 136.7 147 50.3
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 1.1e-29 134.0 144 49.3
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 9.5e-26 120.9 89 56.2
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 9.5e-26 120.9 128 50.0
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 2.8e-25 119.4 126 44.4
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 6.1e-25 118.2 104 55.8
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 2.3e-24 116.3 57 84.2
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 2.2e-22 109.8 143 46.9
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 1.1e-21 107.5 69 71.0
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 1.5e-18 97.1 88 48.9
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 1.7e-14 83.6 96 51.0
HPP92_015957 Vanilla planifolia HOM05D007226 ORTHO05D009160 4.9e-06 55.5 42 54.8


User provided reference genes

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