Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G056500 Manihot esculenta HOM05D007940 ORTHO05D010046 1.1e-50 203.0 99 100.0
Manes.16G057400 Manihot esculenta HOM05D007940 ORTHO05D010046 6.5e-48 193.7 99 94.9
Prupe.4G111600 Prunus persica HOM05D007940 ORTHO05D010046 1.6e-30 136.0 90 70.0
MD05G1252500 Malus domestica HOM05D007940 ORTHO05D010046 3.6e-30 134.8 87 72.4
MD10G1233500 Malus domestica HOM05D007940 ORTHO05D010046 1.0e-29 133.3 87 71.3
TWI38G0312 Tripterygium wilfordii HOM05D007940 ORTHO05D010046 1.2e-28 129.8 79 75.9
Nn7g38154 Nelumbo nucifera HOM05D007940 ORTHO05D010046 2.0e-28 129.0 80 72.5
Sabra15G0137900 Salix brachista HOM05D007940 ORTHO05D010046 2.0e-28 129.0 83 69.9
Potri.015G121500 Populus trichocarpa HOM05D007940 ORTHO05D010046 3.4e-28 128.3 83 69.9
Thecc.06G142100 Theobroma cacao HOM05D007940 ORTHO05D010046 4.4e-28 127.9 81 71.6
Eucgr.D01043 Eucalyptus grandis HOM05D007940 ORTHO05D010046 2.2e-27 125.6 81 74.1
RcHm_v2.0_Chr5g0020061 Rosa chinensis HOM05D007940 ORTHO05D010046 2.2e-27 125.6 81 70.4
Duzib235G0199 Durio zibethinus HOM05D007940 ORTHO05D010046 3.7e-27 124.8 81 70.4
DCAR_003782 Daucus carota HOM05D007940 ORTHO05D010046 4.9e-27 124.4 88 62.5
FAN16G1222 Fragaria x ananassa HOM05D007940 ORTHO05D010046 6.4e-27 124.0 81 71.6
Sc16g0011710 Simmondsia chinensis HOM05D007940 ORTHO05D010046 1.4e-26 122.9 83 67.5
Atru.chr10.309 Acer truncatum HOM05D007940 ORTHO05D010046 3.2e-26 121.7 78 73.1
Cc09_g06150 Coffea canephora HOM05D007940 ORTHO05D010046 4.1e-26 121.3 90 63.3
Medtr2g435250 Medicago truncatula HOM05D007940 ORTHO05D010046 9.2e-26 120.2 85 64.7
SalBow6G6284 Salvia bowleyana HOM05D007940 ORTHO05D010046 1.2e-25 119.8 79 67.1
SalBow8G3130 Salvia bowleyana HOM05D007940 ORTHO05D010046 1.2e-25 119.8 79 67.1
Lalb_Chr07g0188831 Lupinus albus HOM05D007940 ORTHO05D010046 2.0e-25 119.0 84 65.5
SGA_v2.0_scaffold298G47684 Striga asiatica HOM05D007940 ORTHO05D010046 2.0e-25 119.0 79 65.8
Actinidia33707 Actinidia chinensis HOM05D007940 ORTHO05D010046 2.7e-25 118.6 79 69.6
Ah.06g193510 Amaranthus hybridus HOM05D007940 ORTHO05D010046 2.7e-25 118.6 81 64.2
Hma1.2p1_0040F.1_g025155 Hydrangea macrophylla HOM05D007940 ORTHO05D010046 2.7e-25 118.6 81 69.1
Oeu008726.1 Olea europaea HOM05D007940 ORTHO05D010046 3.5e-25 118.2 86 62.8
Migut.M01978 Erythranthe guttata HOM05D007940 ORTHO05D010046 4.6e-25 117.9 90 62.2
Cfa019394 Carpinus fangiana HOM05D007940 ORTHO05D010046 5.9e-25 117.5 82 67.1
Aqoxy3G00719 Aquilegia oxysepala HOM05D007940 ORTHO05D010046 1.0e-24 116.7 88 56.8
QL11p017779 Quercus lobata HOM05D007940 ORTHO05D010046 1.7e-24 115.9 79 67.1
Solyc11g020710.2 Solanum lycopersicum HOM05D007940 ORTHO05D010046 1.7e-24 115.9 80 65.0
Sopen11g010730 Solanum pennellii HOM05D007940 ORTHO05D010046 1.7e-24 115.9 80 65.0
FAN21G0368 Fragaria x ananassa HOM05D007940 ORTHO05D010046 3.0e-24 115.2 81 69.1
BcaC05g27148 Brassica carinata HOM05D007940 ORTHO05D010046 5.0e-24 114.4 81 63.0
BcaC09g51575 Brassica carinata HOM05D007940 ORTHO05D010046 5.0e-24 114.4 81 63.0
BolC1t01151H Brassica oleracea HOM05D007940 ORTHO05D010046 5.0e-24 114.4 81 63.0
CSS0023427 Camellia sinensis var. sinensis HOM05D007940 ORTHO05D010046 5.0e-24 114.4 73 75.3
A09p35060 Brassica napus HOM05D007940 ORTHO05D010046 8.6e-24 113.6 81 63.0
BraA09t39037Z Brassica rapa HOM05D007940 ORTHO05D010046 8.6e-24 113.6 81 63.0
Psat1g156840 Pisum sativum HOM05D007940 ORTHO05D010046 8.6e-24 113.6 81 64.2
AT1G31175 Arabidopsis thaliana HOM05D007940 ORTHO05D010046 1.1e-23 113.2 86 61.6
AL1G49310 Arabidopsis lyrata HOM05D007940 ORTHO05D010046 1.5e-23 112.8 81 63.0
BcaB07g32779 Brassica carinata HOM05D007940 ORTHO05D010046 1.5e-23 112.8 81 63.0
HanXRQChr04g0109371 Helianthus annuus HOM05D007940 ORTHO05D010046 1.9e-23 112.5 90 55.6
Lsat_1_v5_gn_5_23140 Lactuca sativa HOM05D007940 ORTHO05D010046 1.9e-23 112.5 90 55.6
Aa31LG2G15120 Aethionema arabicum HOM05D007940 ORTHO05D010046 2.5e-23 112.1 79 63.3
ClCG01G009440 Citrullus lanatus HOM05D007940 ORTHO05D010046 2.5e-23 112.1 79 65.8
Carub.0001s2958 Capsella rubella HOM05D007940 ORTHO05D010046 3.3e-23 111.7 79 64.6
MELO3C021755.2 Cucumis melo HOM05D007940 ORTHO05D010046 3.3e-23 111.7 79 64.6
Thhalv10009859m.g Eutrema salsugineum HOM05D007940 ORTHO05D010046 3.3e-23 111.7 88 59.1
Sp1g27000 Schrenkiella parvula HOM05D007940 ORTHO05D010046 3.3e-23 111.7 79 63.3
TPR.G22024 Trifolium pratense HOM05D007940 ORTHO05D010046 5.6e-23 110.9 81 61.7
CARHR030670 Cardamine hirsuta HOM05D007940 ORTHO05D010046 7.3e-23 110.5 89 58.4
Ca_01891_v3 Cicer arietinum L. HOM05D007940 ORTHO05D010046 7.3e-23 110.5 81 63.0
HPP92_017565 Vanilla planifolia HOM05D007940 ORTHO05D010046 7.3e-23 110.5 82 64.6
CANSAT35G1488 Cannabis sativa HOM05D007940 ORTHO05D010046 4.7e-22 107.8 84 60.7
Glyma.15G146300 Glycine max HOM05D007940 ORTHO05D010046 4.7e-22 107.8 81 61.7
Phvul.009G252500 Phaseolus vulgaris HOM05D007940 ORTHO05D010046 4.7e-22 107.8 79 60.8
Sed0008509 Sechium edule HOM05D007940 ORTHO05D010046 6.2e-22 107.5 79 63.3
THA.LOC104798551 Tarenaya hassleriana HOM05D007940 ORTHO05D010046 8.0e-22 107.1 79 64.6
COL.COLO4_30989 Corchorus olitorius HOM05D007940 ORTHO05D010046 2.3e-21 105.5 87 55.2
Zm00001eb107160 Zea mays HOM05D007940 ORTHO05D010046 5.2e-21 104.4 89 57.3
Os07g0567500 Oryza sativa ssp. japonica HOM05D007940 ORTHO05D010046 6.8e-21 104.0 89 57.3
EL10Ac4g10315 Beta vulgaris HOM05D007940 ORTHO05D010046 1.5e-20 102.8 73 61.6
MBI02_g13338_MAGBIO Magnolia biondii HOM05D007940 ORTHO05D010046 2.2e-19 99.0 71 64.8
Gohir.D05G147600 Gossypium hirsutum HOM05D007940 ORTHO05D010046 6.4e-19 97.4 81 56.8
Ciclev10017318m.g Citrus clementina HOM05D007940 ORTHO05D010046 3.2e-18 95.1 77 61.0
Gorai.009G151700 Gossypium raimondii HOM05D007940 ORTHO05D010046 9.2e-18 93.6 81 55.6
Gohir.D05G147732 Gossypium hirsutum HOM05D007940 ORTHO05D010046 2.0e-17 92.4 81 54.3
PSO675G1966 Papaver somniferum HOM05D007940 ORTHO05D010046 1.3e-16 89.7 61 63.9
TAR624G1282 Trochodendron aralioides HOM05D007940 ORTHO05D010046 1.7e-11 72.8 51 62.7
Mapoly0019s0110 Marchantia polymorpha HOM05D007940 ORTHO05D010046 7.1e-10 67.4 73 45.2
CsaV3_1G046330 Cucumis sativus L. HOM05D007940 ORTHO05D010046 1.2e-09 66.6 48 58.3
CBR_g28534 Chara braunii HOM05D007940 ORTHO05D010046 1.6e-09 66.2 82 42.7
SMO347G0336 Selaginella moellendorffii HOM05D007940 ORTHO05D010046 2.3e-08 62.4 79 38.0


User provided reference genes

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