Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 1.5e-121 439.5 222 100.0
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 4.1e-82 308.5 234 70.9
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 5.9e-81 304.7 239 70.3
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 7.7e-81 304.3 233 68.2
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 2.9e-80 302.4 239 69.5
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 5.0e-80 301.6 233 67.0
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 7.2e-79 297.7 231 66.7
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 1.6e-78 296.6 228 67.5
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 4.7e-78 295.0 232 66.4
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 1.4e-77 293.5 232 65.9
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 1.8e-77 293.1 239 66.9
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 4.0e-77 292.0 231 67.1
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 2.6e-76 289.3 230 67.8
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 4.8e-75 285.0 230 66.5
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 4.8e-75 285.0 230 66.5
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 1.1e-74 283.9 227 67.4
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 2.4e-74 282.7 230 66.1
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 4.1e-74 282.0 237 65.4
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 1.6e-73 280.0 231 62.3
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 1.6e-73 280.0 234 66.2
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 2.7e-73 279.3 220 65.0
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 1.7e-72 276.6 220 64.1
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 6.5e-72 274.6 220 65.5
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 1.1e-71 273.9 227 63.9
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 3.2e-71 272.3 226 64.6
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 4.2e-71 271.9 231 64.1
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 5.5e-71 271.6 226 64.2
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 1.2e-70 270.4 220 64.1
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 1.6e-70 270.0 235 62.1
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 3.6e-70 268.9 230 62.6
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 3.6e-70 268.9 228 63.2
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 4.7e-70 268.5 237 65.8
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 4.7e-70 268.5 231 61.9
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 8.0e-70 267.7 235 65.5
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 1.0e-69 267.3 229 62.9
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 1.0e-69 267.3 226 62.4
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 1.4e-69 266.9 237 61.2
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 1.8e-69 266.5 237 65.8
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 1.8e-69 266.5 244 61.5
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 1.8e-69 266.5 233 61.4
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 4.0e-69 265.4 231 61.9
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 5.2e-69 265.0 186 73.1
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 8.8e-69 264.2 230 62.6
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 1.5e-68 263.5 231 60.2
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 2.6e-68 262.7 186 72.6
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 9.8e-68 260.8 229 61.6
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 9.8e-68 260.8 200 70.0
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 1.3e-67 260.4 175 77.1
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 2.8e-67 259.2 204 66.7
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 3.7e-67 258.8 232 60.8
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 3.7e-67 258.8 175 76.6
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 6.3e-67 258.1 175 76.6
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 1.4e-66 256.9 212 63.2
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 3.1e-66 255.8 232 63.8
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 4.5e-65 251.9 233 59.7
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 5.0e-64 248.4 221 62.0
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 6.5e-64 248.1 231 60.2
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 8.5e-64 247.7 131 90.1
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 4.2e-63 245.4 232 59.5
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 4.2e-63 245.4 131 88.5
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 4.2e-63 245.4 177 70.1
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.6e-62 243.4 215 62.8
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.6e-62 243.4 215 62.8
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 2.1e-62 243.0 231 59.3
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 2.1e-62 243.0 231 59.3
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 2.1e-62 243.0 231 59.3
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 2.1e-62 243.0 132 87.9
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 2.7e-62 242.7 234 59.4
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 3.6e-62 242.3 230 59.1
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 3.6e-62 242.3 232 59.1
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 1.0e-61 240.7 283 49.8
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 1.8e-61 240.0 233 58.8
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 3.0e-61 239.2 230 58.7
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 3.0e-61 239.2 230 58.7
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 8.8e-61 237.7 130 85.4
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 2.0e-60 236.5 235 59.1
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 9.8e-60 234.2 193 63.7
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 2.8e-59 232.6 131 83.2
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 6.3e-59 231.5 232 56.0
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 5.4e-58 228.4 171 68.4
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 2.0e-57 226.5 125 84.8
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 2.0e-57 226.5 125 84.8
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 2.7e-57 226.1 129 82.2
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 1.3e-56 223.8 154 74.7
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 7.3e-55 218.0 126 81.0
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 5.7e-52 208.4 130 74.6
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 2.2e-51 206.5 134 73.1
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 1.1e-50 204.1 174 62.6
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 1.8e-50 203.4 113 86.7
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 2.4e-50 203.0 111 85.6
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 5.4e-50 201.8 133 72.2
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 4.6e-49 198.7 125 76.0
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 1.7e-48 196.8 174 60.3
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 8.6e-48 194.5 245 48.6
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 7.3e-47 191.4 145 64.1
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 5.8e-44 181.8 230 48.7
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 1.6e-41 173.7 172 57.6
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 2.8e-38 162.9 230 44.8
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 8.3e-35 151.4 127 55.9
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 1.4e-34 150.6 122 64.8
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 1.9e-34 150.2 175 49.7
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 1.5e-23 114.0 165 45.5
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 3.6e-22 109.4 56 91.1
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 2.0e-20 103.6 84 65.5
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 2.6e-20 103.2 67 74.6
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 1.6e-17 94.0 115 43.5
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 8.7e-16 88.2 67 67.2
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 1.1e-13 81.3 113 35.4
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 3.8e-11 72.8 45 80.0
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 3.2e-10 69.7 45 77.8
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 3.5e-09 66.2 101 34.7


User provided reference genes

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