Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G044501 Manihot esculenta HOM05D010003 ORTHO05D000001 1.2e-84 316.6 171 100.0
Manes.02G221966 Manihot esculenta HOM05D010003 ORTHO05D000001 2.4e-82 308.9 170 98.2
Manes.14G166140 Manihot esculenta HOM05D010003 ORTHO05D000001 1.2e-81 306.6 170 93.5
Manes.14G166180 Manihot esculenta HOM05D010003 ORTHO05D000001 2.3e-80 302.4 170 91.8
Manes.16G053115 Manihot esculenta HOM05D010003 ORTHO05D000001 2.3e-80 302.4 170 95.3
Manes.16G039802 Manihot esculenta HOM05D010003 ORTHO05D000001 6.6e-80 300.8 170 95.3
Manes.15G017450 Manihot esculenta HOM05D010003 ORTHO05D000001 9.5e-79 297.0 170 90.6
Manes.05G118952 Manihot esculenta HOM05D010003 ORTHO05D000001 2.8e-78 295.4 170 95.9
Manes.07G085550 Manihot esculenta HOM05D010003 ORTHO05D000001 6.1e-78 294.3 170 90.0
Manes.04G060401 Manihot esculenta HOM05D010003 ORTHO05D000001 5.2e-77 291.2 170 93.5
Manes.07G074101 Manihot esculenta HOM05D010003 ORTHO05D000001 1.6e-70 269.6 165 87.3
Manes.17G026529 Manihot esculenta HOM05D010003 ORTHO05D000001 2.6e-68 262.3 162 86.4
Manes.15G182401 Manihot esculenta HOM05D000006 ORTHO05D000001 5.4e-66 254.6 170 81.2
Manes.18G143201 Manihot esculenta HOM05D000006 ORTHO05D000001 5.4e-66 254.6 170 81.2
Manes.10G076205 Manihot esculenta HOM05D000006 ORTHO05D000001 2.0e-65 252.7 170 80.6
Manes.02G125950 Manihot esculenta HOM05D000006 ORTHO05D000001 1.2e-62 243.4 170 77.6
Manes.18G120350 Manihot esculenta HOM05D000006 ORTHO05D000001 1.2e-60 236.9 170 75.9
Manes.16G069201 Manihot esculenta HOM05D010003 ORTHO05D000001 4.7e-54 214.9 121 90.9
Manes.17G026196 Manihot esculenta HOM05D000006 ORTHO05D000001 8.1e-54 214.2 128 92.2
Manes.17G033205 Manihot esculenta HOM05D000006 ORTHO05D000001 8.6e-48 194.1 128 81.2
Manes.08G063666 Manihot esculenta HOM05D000006 ORTHO05D000001 3.4e-44 182.2 128 76.6
Manes.14G146816 Manihot esculenta HOM05D000006 ORTHO05D000001 3.5e-41 172.2 170 60.6
Manes.12G103911 Manihot esculenta HOM05D000006 ORTHO05D000001 8.1e-38 161.0 87 89.7
Manes.07G075728 Manihot esculenta HOM05D000006 ORTHO05D000001 7.6e-36 154.5 144 61.1
CiPaw.03G261000 Carya illinoinensis HOM05D000006 ORTHO05D000001 1.0e-19 100.9 172 41.9
CiPaw.16G041200 Carya illinoinensis HOM05D000006 ORTHO05D000001 1.0e-19 100.9 172 44.2
ClCG07G007380 Citrullus lanatus HOM05D000006 ORTHO05D000001 1.3e-19 100.5 145 43.4
Manes.09G025663 Manihot esculenta HOM05D010003 ORTHO05D000001 1.3e-19 100.5 57 89.5
Manes.17G020133 Manihot esculenta HOM05D010003 ORTHO05D000001 1.3e-19 100.5 57 89.5
CiPaw.10G102300 Carya illinoinensis HOM05D000006 ORTHO05D000001 3.8e-19 99.0 172 44.8
CiPaw.06G068400 Carya illinoinensis HOM05D000006 ORTHO05D000001 8.4e-19 97.8 172 44.2
CiPaw.06G034700 Carya illinoinensis HOM05D000006 ORTHO05D000001 1.9e-18 96.7 146 45.2
CiPaw.16G044200 Carya illinoinensis HOM05D000006 ORTHO05D000001 2.7e-17 92.8 172 43.6
CiPaw.06G091700 Carya illinoinensis HOM05D000006 ORTHO05D000001 1.0e-16 90.9 125 44.8
CiPaw.03G110400 Carya illinoinensis HOM05D010003 ORTHO05D000001 3.9e-16 89.0 108 47.2
CiPaw.08G179300 Carya illinoinensis HOM05D000006 ORTHO05D000001 7.4e-15 84.7 166 39.2
CiPaw.01G148100 Carya illinoinensis HOM05D000006 ORTHO05D000001 2.8e-14 82.8 172 41.9
CANSAT01G2369 Cannabis sativa HOM05D000006 ORTHO05D000001 4.8e-14 82.0 167 34.7
Thecc.05G127300 Theobroma cacao HOM05D010003 ORTHO05D000001 4.8e-14 82.0 122 41.8
MELO3C031908.2 Cucumis melo HOM05D011212 ORTHO05D013315 8.2e-14 81.3 163 39.3
CANSAT54G2669 Cannabis sativa HOM05D000006 ORTHO05D000001 1.4e-13 80.5 170 35.3
CANSAT64G0321 Cannabis sativa HOM05D000006 ORTHO05D000001 1.8e-13 80.1 170 34.7
Oeu021271.1 Olea europaea HOM05D000006 ORTHO05D000001 2.4e-13 79.7 131 39.7
CANSAT01G2460 Cannabis sativa HOM05D000006 ORTHO05D000001 2.0e-12 76.6 170 34.1
CANSAT11G2182 Cannabis sativa HOM05D000006 ORTHO05D000001 2.0e-12 76.6 170 34.1
Thecc.09G212600 Theobroma cacao HOM05D000006 ORTHO05D000001 2.0e-12 76.6 125 38.4
MELO3C024084.2 Cucumis melo HOM05D011212 ORTHO05D013315 2.6e-12 76.3 168 36.3
CANSAT21G0171 Cannabis sativa HOM05D000006 ORTHO05D000001 3.4e-12 75.9 170 34.7
Duzib168G1730 Durio zibethinus HOM05D000006 ORTHO05D000001 1.3e-11 73.9 140 36.4
Oeu057440.1 Olea europaea HOM05D000006 ORTHO05D000001 1.3e-11 73.9 133 38.3
TPR.G29223 Trifolium pratense HOM05D000006 ORTHO05D000001 1.3e-11 73.9 158 35.4
TWI23G1018 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 1.3e-11 73.9 182 36.3
TWI73G1285 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 1.3e-11 73.9 175 36.0
Ca_16591_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.7e-11 73.6 121 39.7
Thecc.05G098300 Theobroma cacao HOM05D000006 ORTHO05D000001 1.7e-11 73.6 125 39.2
Oeu058490.1 Olea europaea HOM05D010003 ORTHO05D000001 2.9e-11 72.8 171 32.2
Thecc.04G073800 Theobroma cacao HOM05D000006 ORTHO05D000001 3.8e-11 72.4 129 37.2
Ca_07096_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 6.5e-11 71.6 166 32.5
Ca_01743_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.1e-10 70.9 122 31.1
CiPaw.03G219700 Carya illinoinensis HOM05D010003 ORTHO05D000001 2.5e-10 69.7 101 41.6
Thecc.01G256800 Theobroma cacao HOM05D010003 ORTHO05D000001 1.2e-09 67.4 194 28.9
TWI08G0001 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 1.6e-09 67.0 157 35.0
TWI29G0001 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 1.6e-09 67.0 157 35.0
TWI72G0001 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 1.6e-09 67.0 157 35.0
TWI84G0001 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 1.6e-09 67.0 157 35.0
TWI81G1093 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 2.1e-09 66.6 157 35.0
Ca_27268_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.7e-09 66.2 134 34.3
CiPaw.07G216000 Carya illinoinensis HOM05D010003 ORTHO05D000001 4.6e-09 65.5 89 40.4
TWI07G0001 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 6.1e-09 65.1 157 34.4
TWI77G0097 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 6.1e-09 65.1 183 33.3
Ca_02634_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.0e-08 64.3 126 34.9
Ca_26539_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.3e-08 63.9 130 33.8
Thecc.02G204400 Theobroma cacao HOM05D000006 ORTHO05D000001 2.3e-08 63.2 98 37.8
Thecc.09G203000 Theobroma cacao HOM05D000006 ORTHO05D000001 5.1e-08 62.0 97 39.2
Manes.10G085602 Manihot esculenta HOM05D027326 ORTHO05D000001 6.7e-08 61.6 129 35.7
Ca_12125_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000001 1.9e-07 60.1 130 34.6
Ca_27179_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.9e-07 60.1 116 32.8
Ca_26571_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.5e-07 59.7 129 31.8
MELO3C020194.2 Cucumis melo HOM05D011212 ORTHO05D013315 2.5e-07 59.7 159 32.7
TPR.G29281 Trifolium pratense HOM05D010003 ORTHO05D000001 3.3e-07 59.3 117 37.6
Ca_19280_v3 Cicer arietinum L. HOM05D000047 ORTHO05D015604 5.7e-07 58.5 134 30.6
Oeu017525.1 Olea europaea HOM05D000006 ORTHO05D000001 3.7e-06 55.8 102 35.3
Actinidia09879 Actinidia chinensis HOM05D000006 ORTHO05D000001 6.3e-06 55.1 55 54.5
Ca_02816_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 6.3e-06 55.1 94 40.4
Ca_04804_v3 Cicer arietinum L. HOM05D000047 ORTHO05D015604 8.2e-06 54.7 128 28.9


User provided reference genes

Program Settings