Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G040000 Manihot esculenta HOM05D005289 ORTHO05D006346 2.5e-103 379.0 223 100.0
Manes.16G000200 Manihot esculenta HOM05D005289 ORTHO05D006346 6.7e-93 344.4 226 88.1
Manes.16G039900 Manihot esculenta HOM05D005289 ORTHO05D006346 6.7e-93 344.4 229 90.0
Manes.14G174500 Manihot esculenta HOM05D005289 ORTHO05D006346 3.1e-45 186.0 146 67.8
Prupe.1G352600 Prunus persica HOM05D005289 ORTHO05D006346 4.7e-38 162.2 120 68.3
RcHm_v2.0_Chr4g0447301 Rosa chinensis HOM05D005289 ORTHO05D006346 2.4e-37 159.8 120 66.7
CiPaw.16G000100 Carya illinoinensis HOM05D005289 ORTHO05D006346 3.8e-35 152.5 120 63.3
MD16G1005600 Malus domestica HOM05D005289 ORTHO05D006346 6.4e-35 151.8 120 64.2
vmacro13683 Vaccinium macrocarpon HOM05D005289 ORTHO05D006346 5.4e-34 148.7 89 78.7
MD13G1000200 Malus domestica HOM05D005289 ORTHO05D006346 7.1e-34 148.3 120 63.3
Rhsim07G0056900 Rhododendron simsii HOM05D005289 ORTHO05D006346 7.1e-34 148.3 81 85.2
RhsimUnG0144200 Rhododendron simsii HOM05D005289 ORTHO05D006346 9.3e-34 147.9 81 84.0
Cfa018663 Carpinus fangiana HOM05D005289 ORTHO05D006346 1.2e-33 147.5 79 87.3
THA.LOC104800596 Tarenaya hassleriana HOM05D005289 ORTHO05D006346 1.2e-33 147.5 120 62.5
TAR376G0259 Trochodendron aralioides HOM05D005289 ORTHO05D006346 1.6e-33 147.1 118 61.0
Cpa.g.sc248.7 Carica papaya HOM05D005289 ORTHO05D006346 3.5e-33 146.0 124 60.5
CSS0022575 Camellia sinensis var. sinensis HOM05D005289 ORTHO05D006346 6.0e-33 145.2 80 85.0
FvH4_4g37381 Fragaria vesca HOM05D005289 ORTHO05D006346 6.0e-33 145.2 149 54.4
FAN17G1203 Fragaria x ananassa HOM05D005289 ORTHO05D006346 6.0e-33 145.2 149 54.4
PSO063G1455 Papaver somniferum HOM05D005289 ORTHO05D006346 6.0e-33 145.2 122 59.8
FAN07G0133 Fragaria x ananassa HOM05D005289 ORTHO05D006346 1.0e-32 144.4 119 62.2
FAN07G0378 Fragaria x ananassa HOM05D005289 ORTHO05D006346 1.0e-32 144.4 119 62.2
PSO782G1364 Papaver somniferum HOM05D005289 ORTHO05D006346 1.7e-32 143.7 122 60.7
VMungo0464G1452 Vigna mungo HOM05D005289 ORTHO05D006346 3.0e-32 142.9 119 58.0
CANSAT78G0451 Cannabis sativa HOM05D005289 ORTHO05D006346 6.6e-32 141.7 78 79.5
Dinv09331 Davidia involucrata HOM05D005289 ORTHO05D006346 6.6e-32 141.7 80 83.8
Atru.chr11.6 Acer truncatum HOM05D005289 ORTHO05D006346 8.7e-32 141.4 122 70.5
Dinv43423 Davidia involucrata HOM05D005289 ORTHO05D006346 8.7e-32 141.4 80 82.5
Duzib248G0326 Durio zibethinus HOM05D005289 ORTHO05D006346 1.5e-31 140.6 78 84.6
PGR142G2143 Punica granatum HOM05D005289 ORTHO05D006346 1.5e-31 140.6 119 61.3
Nn7g38127 Nelumbo nucifera HOM05D005289 ORTHO05D006346 1.9e-31 140.2 125 65.6
Ciclev10017019m.g Citrus clementina HOM05D005289 ORTHO05D006346 2.5e-31 139.8 116 62.9
QL01p000104 Quercus lobata HOM05D005289 ORTHO05D006346 2.5e-31 139.8 122 65.6
TWI77G0922 Tripterygium wilfordii HOM05D005289 ORTHO05D006346 2.5e-31 139.8 80 81.2
MBI03_g11910_MAGBIO Magnolia biondii HOM05D005289 ORTHO05D006346 3.3e-31 139.4 117 59.0
Gohir.A03G168400 Gossypium hirsutum HOM05D005289 ORTHO05D006346 4.3e-31 139.0 80 80.0
Duzib132G0443 Durio zibethinus HOM05D005289 ORTHO05D006346 5.6e-31 138.7 78 80.8
Eucgr.G02623 Eucalyptus grandis HOM05D005289 ORTHO05D006346 9.6e-31 137.9 78 83.3
Hund08591 Selenicereus undatus HOM05D005289 ORTHO05D006346 9.6e-31 137.9 122 55.7
BraA03t09731Z Brassica rapa HOM05D002331 ORTHO05D002624 1.3e-30 137.5 206 41.7
Lj2g0002318 Lotus japonicus HOM05D005289 ORTHO05D006346 1.3e-30 137.5 78 79.5
A03p03840 Brassica napus HOM05D002331 ORTHO05D002624 1.6e-30 137.1 208 42.3
Gohir.D02G191500 Gossypium hirsutum HOM05D005289 ORTHO05D006346 1.6e-30 137.1 80 78.8
Gorai.005G214300 Gossypium raimondii HOM05D005289 ORTHO05D006346 1.6e-30 137.1 80 78.8
arahy.Tifrunner.gnm1.ann1.CPCZ9R Arachis hypogaea HOM05D005289 ORTHO05D006346 4.8e-30 135.6 78 78.2
AT5G08410 Arabidopsis thaliana HOM05D005289 ORTHO05D006346 8.1e-30 134.8 153 55.6
C03p04320 Brassica napus HOM05D005289 ORTHO05D006346 1.4e-29 134.0 119 57.1
BolC3t12965H Brassica oleracea HOM05D005289 ORTHO05D006346 1.4e-29 134.0 119 57.1
Carub.0006s0732 Capsella rubella HOM05D005289 ORTHO05D006346 1.4e-29 134.0 153 55.6
BcaB01g05597 Brassica carinata HOM05D005289 ORTHO05D006346 1.8e-29 133.7 119 57.1
A02p40970 Brassica napus HOM05D005289 ORTHO05D006346 2.4e-29 133.3 115 55.7
Phvul.004G000400 Phaseolus vulgaris HOM05D005289 ORTHO05D006346 2.4e-29 133.3 134 50.7
Thecc.02G151000 Theobroma cacao HOM05D005289 ORTHO05D006346 2.4e-29 133.3 130 52.3
Sp2g23720 Schrenkiella parvula HOM05D005289 ORTHO05D006346 3.1e-29 132.9 123 62.6
Aa31LG3G18150 Aethionema arabicum HOM05D005289 ORTHO05D006346 4.0e-29 132.5 133 54.1
BcaB01g05599 Brassica carinata HOM05D005289 ORTHO05D006346 4.0e-29 132.5 110 60.0
Glyma.05G000300 Glycine max HOM05D005289 ORTHO05D006346 4.0e-29 132.5 156 46.8
Carub.0006s2124 Capsella rubella HOM05D005289 ORTHO05D006346 5.3e-29 132.1 79 75.9
Thhalv10005472m.g Eutrema salsugineum HOM05D005289 ORTHO05D006346 5.3e-29 132.1 122 63.9
HanXRQChr17g0563021 Helianthus annuus HOM05D005289 ORTHO05D006346 5.3e-29 132.1 127 55.1
BraA02t09045Z Brassica rapa HOM05D005289 ORTHO05D006346 6.9e-29 131.7 115 54.8
Lsat_1_v5_gn_4_31381 Lactuca sativa HOM05D005289 ORTHO05D006346 6.9e-29 131.7 160 46.2
AL6G34730 Arabidopsis lyrata HOM05D005289 ORTHO05D006346 9.0e-29 131.3 115 65.2
AL6G18870 Arabidopsis lyrata HOM05D005289 ORTHO05D006346 1.2e-28 131.0 153 54.2
Thhalv10014787m.g Eutrema salsugineum HOM05D005289 ORTHO05D006346 1.5e-28 130.6 77 77.9
Medtr6g004100 Medicago truncatula HOM05D005289 ORTHO05D006346 1.5e-28 130.6 93 72.0
Ca_04131_v3 Cicer arietinum L. HOM05D005289 ORTHO05D006346 2.0e-28 130.2 80 77.5
Sc06g0007700 Simmondsia chinensis HOM05D005289 ORTHO05D006346 2.0e-28 130.2 78 70.5
AT5G23440 Arabidopsis thaliana HOM05D005289 ORTHO05D006346 2.6e-28 129.8 115 67.8
C02p60860 Brassica napus HOM05D005289 ORTHO05D006346 2.6e-28 129.8 115 53.9
CARHR190070 Cardamine hirsuta HOM05D005289 ORTHO05D006346 2.6e-28 129.8 115 58.3
Glyma.19G000200 Glycine max HOM05D005289 ORTHO05D006346 2.6e-28 129.8 79 78.5
Hma1.2p1_2160F.1_g315560 Hydrangea macrophylla HOM05D005289 ORTHO05D006346 3.4e-28 129.4 81 76.5
Sed0001576 Sechium edule HOM05D005289 ORTHO05D006346 3.4e-28 129.4 154 48.1
CARHR204630 Cardamine hirsuta HOM05D005289 ORTHO05D006346 4.5e-28 129.0 148 55.4
MELO3C011776.2 Cucumis melo HOM05D004444 ORTHO05D005246 4.5e-28 129.0 122 58.2
THA.LOC104819368 Tarenaya hassleriana HOM05D005289 ORTHO05D006346 4.5e-28 129.0 73 80.8
Actinidia31077 Actinidia chinensis HOM05D005289 ORTHO05D006346 7.6e-28 128.3 76 78.9
DCAR_006352 Daucus carota HOM05D005289 ORTHO05D006346 7.6e-28 128.3 82 75.6
Aqoxy3G04359 Aquilegia oxysepala HOM05D005289 ORTHO05D006346 9.9e-28 127.9 116 55.2
BolC2t12138H Brassica oleracea HOM05D005289 ORTHO05D006346 1.3e-27 127.5 115 53.9
Lj9P634T19 Lonicera japonica HOM05D005289 ORTHO05D006346 1.3e-27 127.5 81 72.8
Sed0008094 Sechium edule HOM05D005289 ORTHO05D006346 1.3e-27 127.5 78 73.1
ClCG11G012840 Citrullus lanatus HOM05D005289 ORTHO05D006346 1.7e-27 127.1 78 73.1
CsaV3_5G029240 Cucumis sativus L. HOM05D005289 ORTHO05D006346 2.2e-27 126.7 122 57.4
Cc02_g28180 Coffea canephora HOM05D005289 ORTHO05D006346 4.9e-27 125.6 82 75.6
TPR.G25213 Trifolium pratense HOM05D005289 ORTHO05D006346 4.9e-27 125.6 81 75.3
Sp6g34530 Schrenkiella parvula HOM05D005289 ORTHO05D006346 6.4e-27 125.2 75 77.3
Nitab4.5_0000707g0260 Nicotiana tabacum HOM05D005289 ORTHO05D006346 8.4e-27 124.8 110 60.9
Lsat_1_v5_gn_4_31280 Lactuca sativa HOM05D007122 ORTHO05D008918 1.1e-26 124.4 82 69.5
SalBow6G0941 Salvia bowleyana HOM05D005289 ORTHO05D006346 1.4e-26 124.0 82 75.6
CAN.G219.47 Capsicum annuum HOM05D005289 ORTHO05D006346 2.4e-26 123.2 82 73.2
Solyc01g087520.3 Solanum lycopersicum HOM05D005289 ORTHO05D006346 3.2e-26 122.9 110 60.0
Oeu049005.1 Olea europaea HOM05D005289 ORTHO05D006346 5.4e-26 122.1 82 74.4
PGSC0003DMG400006858 Solanum tuberosum HOM05D005289 ORTHO05D006346 5.4e-26 122.1 110 60.0
CDE05G2330 Ceratophyllum demersum HOM05D005289 ORTHO05D006346 7.1e-26 121.7 118 50.8
Sopen01g034490 Solanum pennellii HOM05D005289 ORTHO05D006346 7.1e-26 121.7 110 60.0
CDE11G0284 Ceratophyllum demersum HOM05D005289 ORTHO05D006346 9.3e-26 121.3 118 50.8
Nitab4.5_0006228g0010 Nicotiana tabacum HOM05D005289 ORTHO05D006346 1.2e-25 120.9 110 60.0
MD10G1109200 Malus domestica HOM05D005289 ORTHO05D006346 1.6e-25 120.6 71 78.9
HPP92_004266 Vanilla planifolia HOM05D005289 ORTHO05D006346 6.0e-25 118.6 118 51.7
ECA234G0076 Erigeron canadensis HOM05D005289 ORTHO05D006346 7.9e-25 118.2 107 56.1
Ah.15g093460 Amaranthus hybridus HOM05D005289 ORTHO05D006346 1.8e-24 117.1 116 50.0
Eucgr.J00323 Eucalyptus grandis HOM05D005289 ORTHO05D006346 2.3e-24 116.7 132 44.7
Sabra10G0198900 Salix brachista HOM05D005289 ORTHO05D006346 3.0e-24 116.3 122 55.7
Migut.N01609 Erythranthe guttata HOM05D005289 ORTHO05D006346 3.9e-24 115.9 92 62.0
SGA_v2.0_scaffold24G10667 Striga asiatica HOM05D005289 ORTHO05D006346 3.9e-24 115.9 133 48.1
AUR62038497 Chenopodium quinoa HOM05D005289 ORTHO05D006346 5.1e-24 115.5 157 42.7
PGR044G1862 Punica granatum HOM05D005289 ORTHO05D006346 5.1e-24 115.5 123 54.5
Oeu049492.1 Olea europaea HOM05D005289 ORTHO05D006346 6.7e-24 115.2 83 69.9
MSTRG.5030 Avicennia marina HOM05D005289 ORTHO05D006346 1.5e-23 114.0 92 62.0
unitig_699.g19828 Utricularia gibba HOM05D005289 ORTHO05D006346 1.9e-23 113.6 130 50.8
AUR62028426 Chenopodium quinoa HOM05D005289 ORTHO05D006346 3.3e-23 112.8 77 63.6
Gohir.A12G011400 Gossypium hirsutum HOM05D005289 ORTHO05D006346 9.6e-23 111.3 70 71.4
Potri.010G255500 Populus trichocarpa HOM05D005289 ORTHO05D006346 9.6e-23 111.3 82 67.1
Gohir.D12G011800 Gossypium hirsutum HOM05D005289 ORTHO05D006346 3.6e-22 109.4 68 72.1
Gorai.008G011800 Gossypium raimondii HOM05D005289 ORTHO05D006346 3.6e-22 109.4 68 72.1
Oeu006561.1 Olea europaea HOM05D005289 ORTHO05D006346 3.6e-22 109.4 83 66.3
Sabra08G0000100 Salix brachista HOM05D005289 ORTHO05D006346 4.8e-22 109.0 82 65.9
ATR0124G002 Amborella trichopoda HOM05D005289 ORTHO05D006346 6.2e-22 108.6 82 61.0
SEGI_30396 Sequoiadendron giganteum HOM05D005289 ORTHO05D006346 6.2e-22 108.6 118 45.8
Os02g0638300 Oryza sativa ssp. japonica HOM05D005289 ORTHO05D006346 1.4e-21 107.5 80 57.5
CDE01G0630 Ceratophyllum demersum HOM05D000556 ORTHO05D006346 1.8e-21 107.1 112 50.0
Zm00001eb248360 Zea mays HOM05D005289 ORTHO05D006346 2.4e-21 106.7 80 57.5
Potri.008G002200 Populus trichocarpa HOM05D005289 ORTHO05D006346 3.1e-21 106.3 81 65.4
Os04g0528800 Oryza sativa ssp. japonica HOM05D005289 ORTHO05D006346 5.3e-21 105.5 80 57.5
Zm00001eb185670 Zea mays HOM05D005289 ORTHO05D006346 7.6e-20 101.7 80 55.0
Zm00001eb075910 Zea mays HOM05D005289 ORTHO05D006346 9.9e-20 101.3 79 55.7
AagrBONN_evm.TU.Sc2ySwM_344.750 Anthoceros agrestis HOM05D005289 ORTHO05D006346 1.3e-19 100.9 78 57.7
SMO367G0363 Selaginella moellendorffii HOM05D005289 ORTHO05D006346 2.9e-19 99.8 77 57.1
EL10Ac1g01282 Beta vulgaris HOM05D005289 ORTHO05D006346 6.4e-19 98.6 98 52.0
A06p34430 Brassica napus HOM05D005289 ORTHO05D006346 1.9e-18 97.1 74 66.2
BraA06t26372Z Brassica rapa HOM05D005289 ORTHO05D006346 1.9e-18 97.1 74 66.2
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 2.4e-18 96.7 73 60.3
MSTRG.28061 Avicennia marina HOM05D005289 ORTHO05D006346 5.5e-18 95.5 57 77.2
Peaxi162Scf00019g00006 Petunia axillaris HOM05D005289 ORTHO05D006346 1.0e-16 91.3 66 68.2
Mapoly0005s0050 Marchantia polymorpha HOM05D005289 ORTHO05D006346 3.9e-16 89.4 122 38.5
Pp3c4_31020 Physcomitrium patens HOM05D005289 ORTHO05D006346 7.4e-15 85.1 80 51.2
CBR_g32063 Chara braunii HOM05D005289 ORTHO05D006346 1.3e-14 84.3 73 56.2
Pp3c4_29510 Physcomitrium patens HOM05D005289 ORTHO05D006346 2.1e-14 83.6 123 39.0
Pp3c26_13800 Physcomitrium patens HOM05D005289 ORTHO05D006346 1.8e-13 80.5 78 50.0
Pp3c26_13840 Physcomitrium patens HOM05D005289 ORTHO05D006346 1.8e-13 80.5 78 50.0
Psat1g053320 Pisum sativum HOM05D005289 ORTHO05D006346 1.0e-11 74.7 79 51.9
Cre16.g687294 Chlamydomonas reinhardtii HOM05D005289 ORTHO05D006346 2.5e-07 60.1 75 45.3
Ah.08g214580 Amaranthus hybridus HOM05D005289 ORTHO05D006346 4.3e-07 59.3 43 58.1
Actinidia19406 Actinidia chinensis HOM05D005289 ORTHO05D006346 1.6e-06 57.4 34 79.4
CDE12G0350 Ceratophyllum demersum HOM05D005289 ORTHO05D006346 1.6e-06 57.4 76 43.4


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