Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G031700 Manihot esculenta HOM05D007160 ORTHO05D005331 2.3e-108 396.0 265 100.0
Manes.17G049000 Manihot esculenta HOM05D007160 ORTHO05D005331 3.3e-38 162.9 297 49.5
Sabra11G0039600 Salix brachista HOM05D007160 ORTHO05D005331 1.1e-28 131.3 274 39.1
Sabra04G0030300 Salix brachista HOM05D007160 ORTHO05D005331 4.0e-28 129.4 297 47.5
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 5.5e-25 119.0 298 35.9
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 2.7e-24 116.7 316 34.8
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 2.5e-17 93.6 279 33.3
Thecc.06G181500 Theobroma cacao HOM05D007160 ORTHO05D005331 5.7e-14 82.4 177 37.3
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 1.1e-12 78.2 277 37.5
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 1.2e-11 74.7 221 36.7
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 1.5e-11 74.3 93 47.3
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 1.0e-10 71.6 305 34.8
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 2.2e-10 70.5 263 34.2
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 5.0e-10 69.3 265 30.2
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.9e-09 67.4 169 39.1
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 2.5e-09 67.0 272 31.2
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 3.2e-09 66.6 111 45.0
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 1.2e-08 64.7 111 44.1
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.2e-08 64.7 164 37.8
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 1.6e-08 64.3 157 31.8
Ciclev10016200m.g Citrus clementina HOM05D007160 ORTHO05D005331 2.1e-08 63.9 297 31.0
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 2.1e-08 63.9 104 50.0
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 2.1e-08 63.9 288 28.1
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 2.7e-08 63.5 136 35.3
Dinv40598 Davidia involucrata HOM05D007882 ORTHO05D009870 3.6e-08 63.2 61 52.5
Sed0008189 Sechium edule HOM05D007160 ORTHO05D005331 4.7e-08 62.8 85 45.9
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 6.1e-08 62.4 327 27.2
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 7.9e-08 62.0 280 36.4
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 1.0e-07 61.6 105 39.0
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.0e-07 61.6 105 39.0
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 1.0e-07 61.6 284 31.3
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 1.4e-07 61.2 270 33.3
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 2.3e-07 60.5 296 35.5
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 2.3e-07 60.5 280 32.9
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.1e-06 58.2 91 40.7
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 1.5e-06 57.8 291 28.9
Gohir.A05G159300 Gossypium hirsutum HOM05D007160 ORTHO05D005331 2.0e-06 57.4 163 31.9
Oeu001099.1 Olea europaea HOM05D007160 ORTHO05D005331 2.0e-06 57.4 155 29.7
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.3e-06 56.6 112 41.1
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 4.4e-06 56.2 288 34.4
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 4.4e-06 56.2 288 34.4
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 4.4e-06 56.2 301 28.6
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 5.7e-06 55.8 205 29.3
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 7.4e-06 55.5 269 26.4
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 9.7e-06 55.1 208 33.2


User provided reference genes

Program Settings