Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G031300 Manihot esculenta HOM05D007507 ORTHO05D009420 7.4e-69 263.8 143 100.0
Manes.17G048900 Manihot esculenta HOM05D007507 ORTHO05D009420 2.3e-46 189.1 136 73.5
Potri.011G057400 Populus trichocarpa HOM05D007507 ORTHO05D009420 2.5e-40 169.1 144 65.3
Sabra11G0039300 Salix brachista HOM05D007507 ORTHO05D009420 3.0e-38 162.2 144 63.9
Potri.004G048201 Populus trichocarpa HOM05D007507 ORTHO05D009420 5.2e-38 161.4 144 63.2
Sabra04G0030100 Salix brachista HOM05D007507 ORTHO05D009420 3.4e-37 158.7 139 64.0
GSVIVG01021107001 Vitis vinifera HOM05D007507 ORTHO05D009420 1.7e-33 146.4 142 55.6
Thecc.06G181600 Theobroma cacao HOM05D007507 ORTHO05D009420 2.9e-33 145.6 143 55.9
MD05G1310700 Malus domestica HOM05D007507 ORTHO05D009420 1.8e-30 136.3 143 53.8
TAR626G1744 Trochodendron aralioides HOM05D007507 ORTHO05D009420 2.3e-30 136.0 132 56.1
Duzib192G0611 Durio zibethinus HOM05D007507 ORTHO05D009420 4.0e-30 135.2 142 51.4
Duzib235G0685 Durio zibethinus HOM05D007507 ORTHO05D009420 5.2e-30 134.8 143 51.0
CiPaw.10G052300 Carya illinoinensis HOM05D007507 ORTHO05D009420 9.8e-29 130.6 141 52.5
Dinv40597 Davidia involucrata HOM05D007507 ORTHO05D009420 1.7e-28 129.8 147 53.7
MD10G1289800 Malus domestica HOM05D007507 ORTHO05D009420 2.2e-28 129.4 138 53.6
Ciclev10016932m.g Citrus clementina HOM05D007507 ORTHO05D009420 4.9e-28 128.3 151 54.3
QL05p042078 Quercus lobata HOM05D007507 ORTHO05D009420 6.4e-28 127.9 131 55.0
Dinv17350 Davidia involucrata HOM05D007507 ORTHO05D009420 1.4e-27 126.7 143 51.7
Actinidia05654 Actinidia chinensis HOM05D007507 ORTHO05D009420 3.2e-27 125.6 140 47.1
Prupe.4G051900 Prunus persica HOM05D007507 ORTHO05D009420 9.2e-27 124.0 137 51.1
Nn1g04226 Nelumbo nucifera HOM05D007507 ORTHO05D009420 3.5e-26 122.1 127 54.3
Actinidia16570 Actinidia chinensis HOM05D007507 ORTHO05D009420 6.0e-26 121.3 141 47.5
RcHm_v2.0_Chr5g0009091 Rosa chinensis HOM05D007507 ORTHO05D009420 7.8e-26 120.9 143 48.3
FAN21G1585 Fragaria x ananassa HOM05D007507 ORTHO05D009420 1.0e-25 120.6 145 48.3
CSS0001598 Camellia sinensis var. sinensis HOM05D007507 ORTHO05D009420 1.3e-25 120.2 141 48.2
CANSAT35G2017 Cannabis sativa HOM05D007507 ORTHO05D009420 2.3e-25 119.4 139 46.0
Gohir.A05G159400 Gossypium hirsutum HOM05D007507 ORTHO05D009420 3.9e-25 118.6 145 50.3
Cpa.g.sc27.9 Carica papaya HOM05D007507 ORTHO05D009420 6.6e-25 117.9 141 47.5
FvH4_3g08680 Fragaria vesca HOM05D007507 ORTHO05D009420 6.6e-25 117.9 143 46.9
Glyma.07G201000 Glycine max HOM05D007507 ORTHO05D009420 1.5e-24 116.7 143 46.2
Gohir.D09G073200 Gossypium hirsutum HOM05D007507 ORTHO05D009420 3.3e-24 115.5 150 46.7
Gorai.006G088200 Gossypium raimondii HOM05D007507 ORTHO05D009420 3.3e-24 115.5 150 46.7
Gohir.D06G135900 Gossypium hirsutum HOM05D007507 ORTHO05D009420 4.3e-24 115.2 147 46.9
Atru.chr10.1803 Acer truncatum HOM05D007507 ORTHO05D009420 7.3e-24 114.4 155 49.0
Atru.chr10.1804 Acer truncatum HOM05D007507 ORTHO05D009420 9.5e-24 114.0 150 52.7
Glyma.13G175400 Glycine max HOM05D007507 ORTHO05D009420 1.2e-23 113.6 143 44.8
Gohir.A09G073500 Gossypium hirsutum HOM05D007507 ORTHO05D009420 1.2e-23 113.6 150 46.7
VMungo0251G0526 Vigna mungo HOM05D007507 ORTHO05D009420 1.2e-23 113.6 138 46.4
Gorai.010G158100 Gossypium raimondii HOM05D007507 ORTHO05D009420 2.1e-23 112.8 147 46.3
MBI07_g29118_MAGBIO Magnolia biondii HOM05D007507 ORTHO05D009420 2.1e-23 112.8 142 45.1
Gohir.D05G162100 Gossypium hirsutum HOM05D007507 ORTHO05D009420 3.6e-23 112.1 144 47.9
FAN11G0818 Fragaria x ananassa HOM05D007507 ORTHO05D009420 4.7e-23 111.7 144 45.8
Gorai.009G167100 Gossypium raimondii HOM05D007507 ORTHO05D009420 6.2e-23 111.3 144 47.9
Phvul.002G232000 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 1.8e-22 109.8 132 47.7
Eucgr.E03247 Eucalyptus grandis HOM05D007507 ORTHO05D009420 2.3e-22 109.4 145 44.8
Glyma.15G077500 Glycine max HOM05D007507 ORTHO05D009420 2.3e-22 109.4 141 46.1
Lj4g0010126 Lotus japonicus HOM05D007507 ORTHO05D009420 4.0e-22 108.6 144 47.2
Lalb_Chr20g0121601 Lupinus albus HOM05D007507 ORTHO05D009420 5.2e-22 108.2 141 42.6
TWI38G1903 Tripterygium wilfordii HOM05D007507 ORTHO05D009420 5.2e-22 108.2 143 48.3
arahy.Tifrunner.gnm1.ann1.UCBT0G Arachis hypogaea HOM05D007507 ORTHO05D009420 1.5e-21 106.7 143 46.2
arahy.Tifrunner.gnm1.ann1.IERL18 Arachis hypogaea HOM05D007507 ORTHO05D009420 4.4e-21 105.1 143 46.2
PGR042G2392 Punica granatum HOM05D007507 ORTHO05D009420 4.4e-21 105.1 141 46.8
PGSC0003DMG400031763 Solanum tuberosum HOM05D007507 ORTHO05D009420 4.4e-21 105.1 141 47.5
Glyma.13G236200 Glycine max HOM05D007507 ORTHO05D009420 5.8e-21 104.8 138 46.4
Cc02_g13780 Coffea canephora HOM05D007507 ORTHO05D009420 7.5e-21 104.4 140 47.1
Medtr4g088390 Medicago truncatula HOM05D007507 ORTHO05D009420 7.5e-21 104.4 143 45.5
Psat7g115600 Pisum sativum HOM05D007507 ORTHO05D009420 7.5e-21 104.4 145 46.2
TPR.G39426 Trifolium pratense HOM05D007507 ORTHO05D009420 2.2e-20 102.8 142 43.7
Aqoxy4G00641 Aquilegia oxysepala HOM05D007507 ORTHO05D009420 2.9e-20 102.4 121 52.1
Hma1.2p1_0558F.1_g178550 Hydrangea macrophylla HOM05D007507 ORTHO05D009420 4.9e-20 101.7 123 52.8
Phvul.006G182800 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 6.4e-20 101.3 141 44.7
Medtr2g014380 Medicago truncatula HOM05D007507 ORTHO05D009420 8.3e-20 100.9 142 42.3
TPR.G19926 Trifolium pratense HOM05D007507 ORTHO05D009420 8.3e-20 100.9 143 44.1
Lsat_1_v5_gn_7_22681 Lactuca sativa HOM05D007507 ORTHO05D009420 1.1e-19 100.5 141 48.2
PSO675G6999 Papaver somniferum HOM05D007507 ORTHO05D009420 1.1e-19 100.5 138 45.7
HanXRQChr04g0113131 Helianthus annuus HOM05D007507 ORTHO05D009420 3.2e-19 99.0 139 46.0
Sopen02g022610 Solanum pennellii HOM05D007507 ORTHO05D009420 7.0e-19 97.8 145 44.1
Solyc02g077720.4 Solanum lycopersicum HOM05D007507 ORTHO05D009420 1.2e-18 97.1 145 44.1
arahy.Tifrunner.gnm1.ann1.XNU6AG Arachis hypogaea HOM05D007507 ORTHO05D009420 6.0e-18 94.7 132 44.7
arahy.Tifrunner.gnm1.ann1.26E61A Arachis hypogaea HOM05D007507 ORTHO05D009420 1.0e-17 94.0 132 44.7
ClCG01G023220 Citrullus lanatus HOM05D007507 ORTHO05D009420 3.0e-17 92.4 144 41.0
MSTRG.14710 Avicennia marina HOM05D007507 ORTHO05D009420 6.6e-17 91.3 136 44.9
Nitab4.5_0002813g0060 Nicotiana tabacum HOM05D007507 ORTHO05D009420 3.3e-16 89.0 128 45.3
VMungo0540G0304 Vigna mungo HOM05D007507 ORTHO05D009420 9.5e-16 87.4 134 44.8
Migut.H01473 Erythranthe guttata HOM05D007507 ORTHO05D009420 2.8e-15 85.9 139 41.7
Nitab4.5_0007893g0030 Nicotiana tabacum HOM05D007507 ORTHO05D009420 6.2e-15 84.7 130 44.6
PSO541G3558 Papaver somniferum HOM05D007507 ORTHO05D009420 8.1e-15 84.3 96 52.1
CsaV3_6G050370 Cucumis sativus L. HOM05D007507 ORTHO05D009420 1.4e-14 83.6 148 38.5
DCAR_004049 Daucus carota HOM05D007507 ORTHO05D009420 1.4e-14 83.6 130 45.4
Oeu064800.1 Olea europaea HOM05D007507 ORTHO05D009420 1.4e-14 83.6 123 45.5
DCAR_008007 Daucus carota HOM05D007507 ORTHO05D009420 4.0e-14 82.0 137 40.9
Oeu027697.1 Olea europaea HOM05D007507 ORTHO05D009420 6.8e-14 81.3 104 47.1
Sed0011593 Sechium edule HOM05D007507 ORTHO05D009420 1.2e-13 80.5 123 40.7
Haze_06387 Corylus avellana HOM05D007507 ORTHO05D009420 4.4e-13 78.6 141 37.6
ECA236G3296 Erigeron canadensis HOM05D007507 ORTHO05D009420 7.1e-11 71.2 80 55.0
SEGI_17757 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 7.1e-11 71.2 79 49.4
Rhsim13G0180100 Rhododendron simsii HOM05D007507 ORTHO05D009420 2.7e-10 69.3 85 43.5
Migut.M01111 Erythranthe guttata HOM05D007507 ORTHO05D009420 3.5e-10 68.9 144 36.8
Oeu015676.1 Olea europaea HOM05D007507 ORTHO05D009420 3.5e-10 68.9 124 41.9
Peaxi162Scf00926g00516 Petunia axillaris HOM05D007507 ORTHO05D009420 1.3e-09 67.0 138 34.1
MELO3C007264.2 Cucumis melo HOM05D007507 ORTHO05D009420 2.5e-08 62.8 105 38.1
SalBow8G4682 Salvia bowleyana HOM05D007507 ORTHO05D009420 4.3e-08 62.0 136 35.3
SEGI_35508 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 1.2e-07 60.5 69 43.5
Psat1g203160 Pisum sativum HOM05D007507 ORTHO05D009420 2.1e-07 59.7 97 36.1
EL10Ac8g20432 Beta vulgaris HOM05D007507 ORTHO05D009420 3.1e-06 55.8 84 39.3
ATR0680G191 Amborella trichopoda HOM05D003527 ORTHO05D004099 5.2e-06 55.1 76 40.8


User provided reference genes

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