Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G021000 Manihot esculenta HOM05D006902 ORTHO05D008468 6.8e-89 330.9 198 100.0
Potri.011G043400 Populus trichocarpa HOM05D006902 ORTHO05D008468 3.3e-51 205.7 200 61.0
Sabra11G0030000 Salix brachista HOM05D006902 ORTHO05D008468 3.4e-48 195.7 200 60.0
Potri.004G035200 Populus trichocarpa HOM05D006902 ORTHO05D008468 7.7e-40 167.9 186 55.4
CsaV3_4G028920 Cucumis sativus L. HOM05D006902 ORTHO05D008468 2.1e-37 159.8 186 59.7
Dinv40499 Davidia involucrata HOM05D006902 ORTHO05D008468 1.0e-36 157.5 177 57.1
TWI38G1087 Tripterygium wilfordii HOM05D006902 ORTHO05D008468 1.1e-35 154.1 175 64.6
Prupe.4G036300 Prunus persica HOM05D006902 ORTHO05D008468 3.3e-35 152.5 202 58.4
Thecc.06G198400 Theobroma cacao HOM05D006902 ORTHO05D008468 3.3e-35 152.5 199 60.8
Atru.chr10.2001 Acer truncatum HOM05D006902 ORTHO05D008468 1.3e-34 150.6 199 50.3
DCAR_008067 Daucus carota HOM05D006902 ORTHO05D008468 2.8e-34 149.4 194 59.3
Hma1.2p1_0144F.1_g064740 Hydrangea macrophylla HOM05D006902 ORTHO05D008468 2.8e-34 149.4 201 57.2
Actinidia24062 Actinidia chinensis HOM05D006902 ORTHO05D008468 6.3e-34 148.3 203 57.6
QL03p053069 Quercus lobata HOM05D006902 ORTHO05D008468 2.4e-33 146.4 180 61.7
Sed0006938 Sechium edule HOM05D006902 ORTHO05D008468 2.4e-33 146.4 199 54.8
Sc05g0008060 Simmondsia chinensis HOM05D006902 ORTHO05D008468 7.0e-33 144.8 209 55.5
Sc05g0010000 Simmondsia chinensis HOM05D006902 ORTHO05D008468 7.0e-33 144.8 209 55.5
Sabra04G0021000 Salix brachista HOM05D006902 ORTHO05D008468 3.5e-32 142.5 187 51.3
ClCG04G003630 Citrullus lanatus HOM05D006902 ORTHO05D008468 4.5e-32 142.1 196 56.6
Gorai.009G173300 Gossypium raimondii HOM05D006902 ORTHO05D008468 1.3e-31 140.6 203 55.7
Ciclev10016776m.g Citrus clementina HOM05D006902 ORTHO05D008468 2.9e-31 139.4 202 57.9
Migut.H01513 Erythranthe guttata HOM05D006902 ORTHO05D008468 5.0e-31 138.7 189 57.1
Gohir.D05G168200 Gossypium hirsutum HOM05D006902 ORTHO05D008468 8.5e-31 137.9 203 55.2
Duzib235G0611 Durio zibethinus HOM05D000306 ORTHO05D000410 1.1e-30 137.5 191 56.5
Gohir.A05G165200 Gossypium hirsutum HOM05D006902 ORTHO05D008468 4.2e-30 135.6 205 53.7
FvH4_3g04070 Fragaria vesca HOM05D006902 ORTHO05D008468 2.1e-29 133.3 183 48.6
Lsat_1_v5_gn_4_57121 Lactuca sativa HOM05D006902 ORTHO05D008468 2.1e-29 133.3 207 54.1
Nn8g40519 Nelumbo nucifera HOM05D006902 ORTHO05D008468 2.1e-29 133.3 173 49.1
Rhsim02G0120100 Rhododendron simsii HOM05D006902 ORTHO05D008468 2.7e-29 132.9 203 48.8
FvH4_1g04320 Fragaria vesca HOM05D006902 ORTHO05D008468 1.4e-28 130.6 172 53.5
RcHm_v2.0_Chr5g0006551 Rosa chinensis HOM05D006902 ORTHO05D008468 3.0e-28 129.4 193 50.3
MSTRG.14679 Avicennia marina HOM05D006902 ORTHO05D008468 5.2e-28 128.6 183 53.6
MD10G1302800 Malus domestica HOM05D006902 ORTHO05D008468 5.2e-28 128.6 207 45.4
Oeu038228.1 Olea europaea HOM05D006902 ORTHO05D008468 8.8e-28 127.9 197 44.7
CiPaw.09G158500 Carya illinoinensis HOM05D006902 ORTHO05D008468 4.4e-27 125.6 184 57.1
PGSC0003DMG402010824 Solanum tuberosum HOM05D006902 ORTHO05D008468 5.7e-27 125.2 166 46.4
Eucgr.D00710 Eucalyptus grandis HOM05D006902 ORTHO05D008468 1.3e-26 124.0 173 59.0
Eucgr.L03594 Eucalyptus grandis HOM05D006902 ORTHO05D008468 1.7e-26 123.6 169 59.2
FAN28G0433 Fragaria x ananassa HOM05D006902 ORTHO05D008468 3.7e-26 122.5 169 51.5
PSO063G2673 Papaver somniferum HOM05D006902 ORTHO05D008468 6.3e-26 121.7 202 53.0
THA.LOC104809549 Tarenaya hassleriana HOM05D006902 ORTHO05D008468 6.3e-26 121.7 205 53.7
PSO782G4966 Papaver somniferum HOM05D006902 ORTHO05D008468 1.8e-25 120.2 202 53.0
Sopen10g004990 Solanum pennellii HOM05D006902 ORTHO05D008468 3.1e-25 119.4 162 45.7
CANSAT56G2140 Cannabis sativa HOM05D006902 ORTHO05D008468 5.3e-25 118.6 206 46.6
Lj4g0003242 Lotus japonicus HOM05D006902 ORTHO05D008468 4.5e-24 115.5 187 51.9
Lalb_Chr16g0383411 Lupinus albus HOM05D006902 ORTHO05D008468 1.7e-23 113.6 179 52.5
HanXRQChr17g0551071 Helianthus annuus HOM05D006902 ORTHO05D008468 2.2e-23 113.2 177 54.2
AUR62014725 Chenopodium quinoa HOM05D006902 ORTHO05D008468 6.5e-23 111.7 190 51.6
ECA234G0685 Erigeron canadensis HOM05D006902 ORTHO05D008468 1.1e-22 110.9 171 52.6
vmacro15868 Vaccinium macrocarpon HOM05D006902 ORTHO05D008468 1.5e-22 110.5 264 37.5
VMungo0251G2276 Vigna mungo HOM05D006902 ORTHO05D008468 1.5e-22 110.5 163 54.6
TPR.G32415 Trifolium pratense HOM05D006902 ORTHO05D008468 1.9e-22 110.2 181 50.3
Medtr4g090910 Medicago truncatula HOM05D006902 ORTHO05D008468 3.2e-22 109.4 196 49.5
QL05p081948 Quercus lobata HOM05D006902 ORTHO05D008468 3.2e-22 109.4 180 53.9
SalBow7G0974 Salvia bowleyana HOM05D006902 ORTHO05D008468 3.2e-22 109.4 126 64.3
Phvul.002G222700 Phaseolus vulgaris HOM05D006902 ORTHO05D008468 4.2e-22 109.0 163 53.4
arahy.Tifrunner.gnm1.ann1.EL94R1 Arachis hypogaea HOM05D006902 ORTHO05D008468 9.4e-22 107.8 172 52.3
Ca_18489_v3 Cicer arietinum L. HOM05D006902 ORTHO05D008468 1.6e-21 107.1 181 49.7
Ca_29542_v3 Cicer arietinum L. HOM05D006902 ORTHO05D008468 1.6e-21 107.1 181 49.7
AUR62016906 Chenopodium quinoa HOM05D006902 ORTHO05D008468 2.7e-21 106.3 201 48.8
Sp1g09900 Schrenkiella parvula HOM05D006902 ORTHO05D008468 3.6e-21 105.9 186 53.2
Cpa.g.sc27.115 Carica papaya HOM05D006902 ORTHO05D008468 1.4e-20 104.0 128 53.9
ATR0580G203 Amborella trichopoda HOM05D006902 ORTHO05D008468 2.3e-20 103.2 197 41.1
arahy.Tifrunner.gnm1.ann1.G41NRI Arachis hypogaea HOM05D006902 ORTHO05D008468 3.0e-20 102.8 173 50.9
Psat7g109600 Pisum sativum HOM05D006902 ORTHO05D008468 5.2e-20 102.1 185 48.6
SGA_v2.0_scaffold159G37666 Striga asiatica HOM05D006902 ORTHO05D008468 1.5e-19 100.5 171 53.2
Cc02_g12510 Coffea canephora HOM05D006902 ORTHO05D008468 7.5e-19 98.2 201 49.3
Glyma.07G190800 Glycine max HOM05D006902 ORTHO05D008468 7.5e-19 98.2 173 51.4
PGR004G1238 Punica granatum HOM05D006902 ORTHO05D008468 9.8e-19 97.8 205 47.8
Ah.14g088940 Amaranthus hybridus HOM05D006902 ORTHO05D008468 2.2e-18 96.7 190 49.5
AT1G11240 Arabidopsis thaliana HOM05D006902 ORTHO05D008468 4.8e-18 95.5 182 49.5
Glyma.08G058500 Glycine max HOM05D006902 ORTHO05D008468 6.3e-18 95.1 172 50.0
BolC5t29692H Brassica oleracea HOM05D006902 ORTHO05D008468 8.3e-18 94.7 178 48.3
Aqoxy7G03119 Aquilegia oxysepala HOM05D006902 ORTHO05D008468 1.8e-17 93.6 197 42.1
C05p09500 Brassica napus HOM05D006902 ORTHO05D008468 2.4e-17 93.2 178 47.8
Nitab4.5_0003223g0030 Nicotiana tabacum HOM05D006902 ORTHO05D008468 2.4e-17 93.2 185 48.6
Ah.09g236070 Amaranthus hybridus HOM05D006902 ORTHO05D008468 3.1e-17 92.8 187 48.7
Carub.0001s1082 Capsella rubella HOM05D006902 ORTHO05D008468 4.1e-17 92.4 195 46.7
Peaxi162Scf00371g01024 Petunia axillaris HOM05D006902 ORTHO05D008468 4.1e-17 92.4 172 45.3
EL10Ac8g20614 Beta vulgaris HOM05D006902 ORTHO05D008468 9.1e-17 91.3 195 47.2
BcaNung04470 Brassica carinata HOM05D006902 ORTHO05D008468 9.1e-17 91.3 178 48.3
FAN25G0692 Fragaria x ananassa HOM05D006902 ORTHO05D008468 1.2e-16 90.9 146 47.3
AL1G22260 Arabidopsis lyrata HOM05D006902 ORTHO05D008468 3.5e-16 89.4 179 47.5
COL.COLO4_31574 Corchorus olitorius HOM05D000306 ORTHO05D000410 3.5e-16 89.4 181 50.8
A06p07900 Brassica napus HOM05D006902 ORTHO05D008468 1.0e-15 87.8 191 47.1
BraA06t23989Z Brassica rapa HOM05D006902 ORTHO05D008468 1.0e-15 87.8 191 47.1
CARHR011470 Cardamine hirsuta HOM05D006902 ORTHO05D008468 1.0e-15 87.8 190 48.9
Aa31LG1G3550 Aethionema arabicum HOM05D006902 ORTHO05D008468 1.3e-15 87.4 175 48.6
Thhalv10008794m.g Eutrema salsugineum HOM05D006902 ORTHO05D008468 2.9e-15 86.3 190 48.9
Hund23624 Selenicereus undatus HOM05D006902 ORTHO05D008468 5.0e-15 85.5 112 61.6
unitig_8.g3353 Utricularia gibba HOM05D006902 ORTHO05D008468 7.2e-14 81.6 152 50.7
Os03g0353500 Oryza sativa ssp. japonica HOM05D006902 ORTHO05D008468 3.6e-13 79.3 205 40.0
FAN11G0740 Fragaria x ananassa HOM05D000306 ORTHO05D000410 1.8e-12 77.0 87 51.7
SEGI_26187 Sequoiadendron giganteum HOM05D006902 ORTHO05D008468 2.3e-12 76.6 191 44.0
BolC8t49055H Brassica oleracea HOM05D006902 ORTHO05D008468 3.0e-12 76.3 180 46.7
FAN19G2227 Fragaria x ananassa HOM05D006902 ORTHO05D008468 6.8e-12 75.1 109 47.7
FAN23G2525 Fragaria x ananassa HOM05D006902 ORTHO05D008468 1.5e-11 73.9 109 46.8
Nitab4.5_0005936g0020 Nicotiana tabacum HOM05D006902 ORTHO05D008468 2.6e-11 73.2 171 45.0
BcaC05g24999 Brassica carinata HOM05D006902 ORTHO05D008468 3.4e-11 72.8 102 61.8
Cpa.g.c36644 Carica papaya HOM05D006902 ORTHO05D008468 4.4e-11 72.4 66 84.8
FAN26G1405 Fragaria x ananassa HOM05D006902 ORTHO05D008468 1.3e-10 70.9 109 45.0
TAR625G0841 Trochodendron aralioides HOM05D006902 ORTHO05D008468 3.7e-10 69.3 97 46.4
BcaC07g38645 Brassica carinata HOM05D006902 ORTHO05D008468 4.1e-09 65.9 179 44.7
Nitab4.5_0003223g0040 Nicotiana tabacum HOM05D006902 ORTHO05D008468 2.0e-08 63.5 105 41.0
Zm00001eb394590 Zea mays HOM05D006902 ORTHO05D008468 7.7e-08 61.6 193 36.3
MD05G1325000 Malus domestica HOM05D006902 ORTHO05D008468 8.6e-07 58.2 49 63.3
TAR636G2458 Trochodendron aralioides HOM05D006902 ORTHO05D008468 8.6e-07 58.2 116 45.7
BcaC05g24986 Brassica carinata HOM05D006902 ORTHO05D008468 4.3e-06 55.8 122 38.5
Pp3c20_8900 Physcomitrium patens HOM05D006902 ORTHO05D008468 7.3e-06 55.1 197 27.4


User provided reference genes

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