Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 0.0e+00 1394.4 677 100.0
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 2.6e-212 742.7 729 58.2
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 8.3e-211 737.6 703 57.8
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 8.3e-211 737.6 703 58.0
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 1.5e-207 726.9 665 59.8
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 8.0e-206 721.1 677 57.6
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 3.1e-205 719.2 717 56.3
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 4.1e-202 708.8 744 53.9
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 2.0e-201 706.4 692 56.2
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 3.9e-200 702.2 675 56.1
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 6.2e-198 694.9 584 61.6
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 2.2e-195 686.4 530 66.6
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 2.9e-195 686.0 690 55.7
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 2.9e-195 686.0 686 56.0
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 3.5e-193 679.1 479 67.6
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 4.0e-189 665.6 447 69.8
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 5.2e-189 665.2 715 54.0
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 1.2e-188 664.1 693 54.4
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 7.6e-188 661.4 657 54.9
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 6.4e-187 658.3 686 52.6
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 9.2e-186 654.4 698 54.2
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 7.8e-185 651.4 665 54.3
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 1.0e-184 651.0 663 54.1
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 1.7e-184 650.2 477 66.7
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 1.7e-184 650.2 714 52.1
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 3.0e-184 649.4 473 66.6
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 3.0e-184 649.4 724 52.2
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 8.7e-184 647.9 721 51.0
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 1.5e-183 647.1 477 66.0
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 2.5e-183 646.4 638 53.4
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 7.3e-183 644.8 477 65.8
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 4.7e-182 642.1 686 50.9
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 1.4e-181 640.6 695 51.7
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 9.0e-181 637.9 646 53.1
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 1.2e-180 637.5 652 53.4
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 7.6e-180 634.8 748 48.4
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 9.9e-180 634.4 508 62.4
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 9.9e-180 634.4 472 65.5
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 4.2e-178 629.0 688 52.3
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 4.2e-178 629.0 631 53.6
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 1.6e-177 627.1 593 56.7
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 1.9e-175 620.2 525 59.0
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 4.3e-175 619.0 593 56.7
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 7.3e-175 618.2 464 64.9
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 1.6e-174 617.1 474 63.3
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 2.1e-174 616.7 453 66.7
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 6.2e-174 615.1 487 62.0
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 3.1e-173 612.8 583 56.9
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 4.0e-173 612.5 677 51.4
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 1.7e-171 607.1 535 58.5
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 6.4e-171 605.1 482 62.0
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 3.9e-168 595.9 693 49.9
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 3.9e-168 595.9 447 64.0
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 5.1e-168 595.5 597 54.9
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 6.2e-166 588.6 716 49.7
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 3.1e-165 586.3 423 65.2
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 5.3e-165 585.5 686 48.3
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 1.2e-164 584.3 505 59.4
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 1.3e-158 564.3 686 47.5
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 2.1e-158 563.5 443 62.1
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 6.2e-158 562.0 717 47.6
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 8.2e-158 561.6 409 65.3
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 2.0e-156 557.0 436 62.4
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 2.2e-155 553.5 571 52.2
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 2.5e-154 550.1 555 52.8
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 6.0e-153 545.4 472 59.1
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 1.6e-150 537.3 611 51.4
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 2.2e-142 510.4 552 52.2
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 3.1e-133 479.9 354 63.8
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 2.3e-120 437.2 287 71.4
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 6.5e-115 419.1 449 48.1
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 3.8e-107 393.3 497 47.1
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 5.0e-99 366.3 498 47.4
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 1.2e-95 355.1 263 63.9
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 5.8e-87 326.2 357 50.4
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 1.3e-86 325.1 283 57.6
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 1.4e-85 321.6 464 46.1
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 1.3e-78 298.5 410 45.1
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 7.6e-63 246.1 279 47.7
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 1.3e-59 235.3 187 62.0
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 1.5e-42 178.7 133 60.9
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 1.3e-35 155.6 133 59.4
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 3.0e-35 154.5 143 57.3
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 8.2e-33 146.4 327 37.3
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 1.2e-31 142.5 78 82.1
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 3.8e-30 137.5 520 26.7
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 4.7e-20 104.0 128 46.1
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 1.1e-16 92.8 223 31.4
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 1.0e-14 86.3 82 53.7
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 1.3e-14 85.9 97 48.5
PRCOL_00005975 Prasinoderma coloniale HOM05D000032 ORTHO05D028824 3.2e-13 81.3 185 31.4
Cre03.g188750 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D028824 1.6e-12 79.0 219 31.1
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 1.4e-11 75.9 188 33.0
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 1.8e-11 75.5 57 56.1
SGA_v2.0_scaffold26G11386 Striga asiatica HOM05D007621 ORTHO05D009631 2.0e-07 62.0 58 51.7
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 3.5e-07 61.2 273 28.9


User provided reference genes

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