Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 1.1e-75 286.6 143 100.0
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 5.5e-48 194.5 144 72.9
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 4.0e-46 188.3 144 70.8
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 5.7e-45 184.5 140 72.1
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 1.1e-43 180.3 143 67.1
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 1.4e-43 179.9 133 73.7
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 1.6e-42 176.4 145 64.1
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 7.7e-42 174.1 144 66.0
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 1.3e-41 173.3 147 65.3
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 1.3e-41 173.3 136 68.4
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 2.3e-41 172.6 135 68.1
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 3.8e-41 171.8 145 63.4
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 6.5e-41 171.0 146 65.8
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 8.6e-41 170.6 133 67.7
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 2.5e-40 169.1 134 64.9
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 9.5e-40 167.2 136 67.6
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 1.2e-39 166.8 129 67.4
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 2.1e-39 166.0 137 65.7
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 2.1e-39 166.0 139 61.9
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 2.8e-39 165.6 145 63.4
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 3.6e-39 165.2 137 65.7
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 3.6e-39 165.2 141 64.5
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 4.7e-39 164.9 141 63.1
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 8.0e-39 164.1 104 78.8
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 1.0e-38 163.7 137 65.0
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 3.0e-38 162.2 132 68.2
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 4.0e-38 161.8 152 61.8
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 5.2e-38 161.4 122 66.4
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 6.8e-38 161.0 122 67.2
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 1.2e-37 160.2 110 74.5
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 1.2e-37 160.2 112 73.2
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 1.2e-37 160.2 147 60.5
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.5e-37 159.8 147 60.5
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 2.6e-37 159.1 146 60.3
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 2.6e-37 159.1 145 64.8
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 4.4e-37 158.3 115 69.6
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 4.4e-37 158.3 113 72.6
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 4.4e-37 158.3 110 74.5
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 4.4e-37 158.3 113 72.6
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 4.4e-37 158.3 113 72.6
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 4.4e-37 158.3 145 63.4
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 9.8e-37 157.1 110 73.6
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 2.8e-36 155.6 110 72.7
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 3.7e-36 155.2 118 66.1
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 3.7e-36 155.2 113 70.8
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 3.7e-36 155.2 113 69.9
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 3.7e-36 155.2 108 73.1
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 6.3e-36 154.5 129 63.6
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 6.3e-36 154.5 127 64.6
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 8.3e-36 154.1 130 63.1
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 1.4e-35 153.3 150 62.0
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 1.4e-35 153.3 133 63.2
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 1.8e-35 152.9 142 59.2
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 2.4e-35 152.5 144 61.1
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 3.1e-35 152.1 104 72.1
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 3.1e-35 152.1 91 80.2
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 3.1e-35 152.1 91 80.2
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 3.1e-35 152.1 111 70.3
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 7.0e-35 151.0 135 60.7
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 9.2e-35 150.6 130 63.8
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 9.2e-35 150.6 130 62.3
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 1.2e-34 150.2 131 61.8
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 1.2e-34 150.2 98 76.5
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 1.2e-34 150.2 130 63.1
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 2.7e-34 149.1 105 71.4
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 2.7e-34 149.1 86 81.4
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 3.5e-34 148.7 94 75.5
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 3.5e-34 148.7 94 75.5
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 5.9e-34 147.9 86 80.2
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 7.8e-34 147.5 157 52.9
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 7.8e-34 147.5 130 61.5
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 1.0e-33 147.1 91 76.9
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 1.7e-33 146.4 148 58.8
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 2.3e-33 146.0 146 56.2
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 2.3e-33 146.0 146 56.2
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 2.3e-33 146.0 84 82.1
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 5.0e-33 144.8 83 81.9
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 6.6e-33 144.4 83 85.5
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 8.6e-33 144.1 141 55.3
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 1.1e-32 143.7 144 57.6
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 1.1e-32 143.7 132 55.3
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 1.9e-32 142.9 99 71.7
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 1.9e-32 142.9 82 81.7
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 3.3e-32 142.1 82 82.9
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 7.3e-32 141.0 150 56.7
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 7.3e-32 141.0 92 77.2
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 9.5e-32 140.6 145 57.2
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 3.6e-31 138.7 88 79.5
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 6.1e-31 137.9 95 69.5
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 1.8e-30 136.3 80 81.2
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 2.0e-29 132.9 87 74.7
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 2.4e-27 125.9 136 52.2
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 2.4e-27 125.9 91 69.2
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 2.0e-26 122.9 74 75.7
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 1.3e-25 120.2 80 66.2
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 8.6e-25 117.5 71 76.1
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 3.6e-23 112.1 138 52.2
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 8.0e-23 110.9 76 67.1
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 8.0e-23 110.9 105 58.1
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 3.1e-22 109.0 75 69.3
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 1.2e-21 107.1 79 64.6
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 4.1e-19 98.6 123 51.2
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 5.0e-17 91.7 52 80.8
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 1.5e-16 90.1 74 68.9
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 9.5e-16 87.4 66 71.2
BcaNung00854 Brassica carinata HOM05D007380 ORTHO05D009269 1.9e-08 63.2 59 59.3


User provided reference genes

Program Settings