Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 2.4e-137 492.3 262 100.0
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 1.3e-90 337.0 249 72.3
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 4.8e-82 308.5 243 67.9
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 1.4e-81 307.0 242 67.4
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 9.1e-81 304.3 246 65.9
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 7.7e-80 301.2 254 64.6
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 2.2e-79 299.7 252 65.9
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 1.4e-78 297.0 253 63.2
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 1.6e-77 293.5 253 62.8
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 3.6e-77 292.4 252 61.5
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 4.7e-77 292.0 259 63.7
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 1.0e-76 290.8 253 63.2
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 7.4e-75 284.6 216 69.4
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 9.7e-75 284.3 244 61.9
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 2.2e-74 283.1 242 63.2
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 8.2e-74 281.2 261 59.4
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.4e-73 279.6 226 64.6
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.1e-73 278.9 185 74.6
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 7.0e-73 278.1 242 59.5
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 9.1e-73 277.7 226 64.6
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 9.1e-73 277.7 270 57.4
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 2.0e-72 276.6 242 59.5
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 2.0e-72 276.6 211 68.2
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 3.5e-72 275.8 186 76.3
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 4.5e-72 275.4 204 69.6
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 5.9e-72 275.0 236 60.2
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 5.9e-72 275.0 217 65.9
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.0e-71 274.2 226 63.3
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.0e-71 274.2 224 64.3
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 2.2e-71 273.1 211 65.4
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.9e-71 272.7 171 77.8
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 6.5e-71 271.6 219 65.3
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 1.6e-69 266.9 237 59.5
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 1.6e-69 266.9 219 63.0
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 2.1e-69 266.5 219 64.8
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 2.1e-69 266.5 243 58.0
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 2.7e-69 266.2 243 60.1
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 4.7e-69 265.4 170 75.3
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 1.0e-68 264.2 198 65.7
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 1.4e-68 263.8 199 66.3
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 1.4e-68 263.8 199 66.3
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 2.3e-68 263.1 207 64.3
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 3.0e-68 262.7 207 63.8
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 4.0e-68 262.3 212 65.6
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 5.2e-68 261.9 240 59.6
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 6.8e-68 261.5 225 59.6
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 8.8e-68 261.2 247 55.1
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 8.8e-68 261.2 252 57.9
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 1.2e-67 260.8 238 59.2
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 1.2e-67 260.8 186 69.4
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 1.5e-67 260.4 186 68.8
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 1.5e-67 260.4 218 60.6
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 2.6e-67 259.6 237 59.9
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 3.4e-67 259.2 252 56.0
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 1.3e-66 257.3 204 67.2
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 2.2e-66 256.5 238 59.2
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 2.2e-66 256.5 238 60.1
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 2.8e-66 256.1 217 60.8
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 2.8e-66 256.1 217 60.8
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 3.7e-66 255.8 253 53.4
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 4.8e-66 255.4 204 66.7
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 6.3e-66 255.0 310 50.3
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 8.3e-66 254.6 237 58.2
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 1.1e-65 254.2 252 54.8
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 1.4e-65 253.8 242 57.9
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 1.4e-65 253.8 228 58.8
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 2.4e-65 253.1 231 59.7
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 3.1e-65 252.7 186 67.7
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 3.1e-65 252.7 252 57.1
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 9.1e-65 251.1 217 59.4
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 7.7e-64 248.1 171 68.4
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 1.3e-63 247.3 218 57.8
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 3.8e-63 245.7 163 73.0
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 8.5e-63 244.6 206 58.3
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 8.5e-63 244.6 184 63.6
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 2.5e-62 243.0 170 70.0
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 2.5e-62 243.0 252 51.6
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 3.2e-62 242.7 200 60.0
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 1.2e-61 240.7 219 58.4
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 8.0e-61 238.0 171 69.0
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 5.2e-60 235.3 170 65.9
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 6.8e-60 235.0 171 65.5
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 1.5e-59 233.8 203 63.1
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 2.0e-59 233.4 174 64.4
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 2.6e-59 233.0 202 59.4
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 2.6e-59 233.0 214 57.0
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 2.2e-58 229.9 214 56.5
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 9.1e-57 224.6 173 61.3
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 1.3e-55 220.7 192 59.4
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 1.7e-55 220.3 154 68.8
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 5.0e-55 218.8 238 53.4
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 6.6e-55 218.4 253 49.0
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 1.9e-54 216.9 238 50.0
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 1.9e-54 216.9 198 56.1
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 2.8e-53 213.0 203 53.7
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 1.8e-52 210.3 251 47.4
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 1.8e-52 210.3 165 64.2
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 1.8e-52 210.3 180 55.6
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 3.0e-52 209.5 140 72.1
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 4.9e-50 202.2 194 55.2
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.6e-45 187.2 219 48.9
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 5.2e-44 182.2 203 45.3
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 8.9e-44 181.4 114 72.8
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 2.6e-43 179.9 129 64.3
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 7.5e-43 178.3 132 64.4
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 1.3e-42 177.6 202 43.6
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 8.9e-36 154.8 112 67.0
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 3.7e-34 149.4 190 40.5
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.1e-33 147.9 176 51.1
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 1.9e-33 147.1 175 44.0
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 3.3e-30 136.3 177 40.1
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 8.1e-29 131.7 186 38.2


User provided reference genes

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