Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 4.8e-48 194.1 96 100.0
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 4.7e-35 151.0 99 77.8
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 4.0e-34 147.9 98 74.5
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 8.9e-34 146.7 101 71.3
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 8.9e-34 146.7 99 76.8
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 1.5e-33 146.0 103 69.9
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 2.6e-33 145.2 97 76.3
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 3.4e-33 144.8 98 73.5
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 4.4e-33 144.4 98 74.5
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.3e-32 142.9 98 76.5
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 2.2e-32 142.1 98 72.4
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 3.7e-32 141.4 96 69.8
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 6.4e-32 140.6 99 73.7
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 1.1e-31 139.8 98 70.4
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 1.1e-31 139.8 103 68.9
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 1.9e-31 139.0 98 72.4
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 2.4e-31 138.7 96 70.8
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 3.2e-31 138.3 95 75.8
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 3.2e-31 138.3 96 72.9
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 4.1e-31 137.9 96 69.8
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 4.1e-31 137.9 96 70.8
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 4.1e-31 137.9 96 70.8
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 4.1e-31 137.9 101 68.3
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 4.1e-31 137.9 97 71.1
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 9.2e-31 136.7 96 69.8
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 1.2e-30 136.3 99 71.7
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 2.0e-30 135.6 101 66.3
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 2.7e-30 135.2 96 67.7
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 2.7e-30 135.2 107 66.4
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 3.5e-30 134.8 96 70.8
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 3.5e-30 134.8 96 70.8
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 3.5e-30 134.8 97 74.2
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 3.5e-30 134.8 96 68.8
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 6.0e-30 134.0 101 68.3
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 6.0e-30 134.0 101 68.3
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 6.0e-30 134.0 101 68.3
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 6.0e-30 134.0 100 67.0
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 7.8e-30 133.7 99 68.7
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 7.8e-30 133.7 96 69.8
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 7.8e-30 133.7 96 69.8
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 1.0e-29 133.3 96 68.8
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 1.0e-29 133.3 113 63.7
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 1.0e-29 133.3 100 70.0
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 1.3e-29 132.9 96 66.7
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 1.3e-29 132.9 104 66.3
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 1.7e-29 132.5 96 68.8
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 1.7e-29 132.5 103 65.0
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 2.3e-29 132.1 96 67.7
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 2.3e-29 132.1 96 67.7
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 2.3e-29 132.1 103 64.1
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 3.0e-29 131.7 101 67.3
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 3.9e-29 131.3 96 65.6
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 5.0e-29 131.0 97 73.2
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 6.6e-29 130.6 100 66.0
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 6.6e-29 130.6 106 65.1
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 6.6e-29 130.6 103 64.1
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 8.6e-29 130.2 96 67.7
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 8.6e-29 130.2 104 66.3
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 1.1e-28 129.8 104 65.4
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 1.1e-28 129.8 104 66.3
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 1.1e-28 129.8 103 63.1
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 1.1e-28 129.8 103 63.1
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 2.5e-28 128.6 99 64.6
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 2.5e-28 128.6 99 62.6
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 3.3e-28 128.3 107 64.5
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 3.3e-28 128.3 107 64.5
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 3.3e-28 128.3 107 64.5
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 3.3e-28 128.3 104 64.4
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 4.3e-28 127.9 96 69.8
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 4.3e-28 127.9 101 66.3
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 5.6e-28 127.5 96 65.6
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 5.6e-28 127.5 103 63.1
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 9.5e-28 126.7 94 68.1
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 9.5e-28 126.7 104 64.4
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 1.2e-27 126.3 106 64.2
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 1.2e-27 126.3 106 64.2
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 1.6e-27 125.9 99 62.6
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 1.6e-27 125.9 102 63.7
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 2.1e-27 125.6 100 64.0
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 2.8e-27 125.2 102 63.7
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 2.8e-27 125.2 98 63.3
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 3.6e-27 124.8 97 64.9
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 3.6e-27 124.8 103 65.0
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 3.6e-27 124.8 105 61.9
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 3.6e-27 124.8 105 63.8
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 1.1e-26 123.2 103 63.1
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 1.1e-26 123.2 99 64.6
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 1.4e-26 122.9 102 63.7
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 1.4e-26 122.9 99 64.6
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.8e-26 122.5 105 64.8
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 2.3e-26 122.1 103 60.2
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 3.1e-26 121.7 102 63.7
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 3.1e-26 121.7 102 64.7
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 4.0e-26 121.3 107 59.8
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 8.9e-26 120.2 97 63.9
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 1.2e-25 119.8 100 63.0
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.5e-25 119.4 97 61.9
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 2.0e-25 119.0 103 61.2
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 2.6e-25 118.6 106 61.3
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 3.4e-25 118.2 88 69.3
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 4.4e-25 117.9 104 60.6
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 5.8e-25 117.5 97 59.8
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 7.5e-25 117.1 90 65.6
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 7.5e-25 117.1 103 61.2
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 9.8e-25 116.7 100 63.0
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 4.1e-23 111.3 63 81.0
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 1.6e-22 109.4 91 60.4
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 1.6e-22 109.4 119 50.4
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 6.0e-22 107.5 96 59.4
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 7.8e-22 107.1 102 59.8
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 1.7e-21 105.9 75 70.7
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 2.3e-21 105.5 67 74.6
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 1.1e-20 103.2 108 56.5
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 1.6e-19 99.4 96 58.3
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 3.6e-19 98.2 62 71.0
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 5.2e-18 94.4 102 50.0
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 3.4e-17 91.7 91 54.9
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 1.3e-16 89.7 72 62.5
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 4.9e-16 87.8 71 57.7
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 5.4e-15 84.3 50 68.0
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 1.7e-13 79.3 52 69.2
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 1.7e-13 79.3 86 46.5
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 2.3e-13 79.0 55 67.3
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 3.3e-12 75.1 89 44.9
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.6e-11 72.8 133 37.6
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 4.7e-11 71.2 86 45.3
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 6.8e-10 67.4 71 50.7
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 4.4e-09 64.7 32 84.4


User provided reference genes

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