Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 1.5e-197 692.6 327 100.0
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 2.6e-146 522.3 322 74.2
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 1.4e-139 500.0 353 67.7
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 2.1e-135 486.1 320 71.2
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 2.7e-135 485.7 319 70.5
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 3.4e-133 478.8 301 71.8
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 4.4e-133 478.4 301 71.4
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 2.2e-132 476.1 314 71.0
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 2.2e-132 476.1 301 71.8
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 2.8e-132 475.7 315 70.5
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 4.1e-131 471.9 290 75.5
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 2.0e-130 469.5 318 69.5
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 2.7e-130 469.2 320 69.1
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 3.5e-130 468.8 318 67.6
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 5.9e-130 468.0 298 71.8
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 5.9e-130 468.0 298 71.8
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 2.9e-129 465.7 298 72.1
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 2.5e-128 462.6 334 66.8
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 7.2e-128 461.1 296 71.3
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 9.5e-128 460.7 296 70.9
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 6.1e-127 458.0 320 66.9
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 2.3e-126 456.1 294 70.7
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 2.3e-126 456.1 320 65.6
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 7.5e-125 451.1 322 63.4
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 1.7e-124 449.9 301 70.8
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 2.8e-124 449.1 297 69.7
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 8.3e-124 447.6 320 65.3
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 1.1e-123 447.2 298 69.5
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 1.4e-123 446.8 302 70.2
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 4.1e-123 445.3 296 69.3
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 5.4e-123 444.9 316 64.9
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 1.0e-121 440.7 319 63.9
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 2.3e-121 439.5 320 63.4
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 5.0e-121 438.3 316 67.1
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 7.3e-120 434.5 296 66.9
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 1.2e-119 433.7 296 67.6
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 1.6e-119 433.3 303 68.3
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 1.6e-119 433.3 305 66.2
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 2.1e-119 433.0 296 69.6
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 3.6e-119 432.2 320 65.0
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 1.4e-118 430.3 287 68.6
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 5.2e-118 428.3 295 66.8
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 2.0e-117 426.4 300 67.3
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 3.4e-117 425.6 299 65.2
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 5.8e-117 424.9 299 65.2
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 5.8e-117 424.9 297 66.7
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 9.8e-117 424.1 300 64.7
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 1.7e-116 423.3 319 61.4
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 1.9e-115 419.9 261 74.7
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 3.2e-115 419.1 301 67.4
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 4.1e-115 418.7 299 63.9
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 5.4e-115 418.3 302 63.9
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 5.4e-115 418.3 311 65.6
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 1.2e-114 417.2 288 66.0
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 1.6e-114 416.8 295 65.4
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.6e-114 416.8 301 66.8
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 2.0e-114 416.4 326 61.7
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 2.7e-114 416.0 302 64.2
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 1.3e-113 413.7 302 64.6
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 1.7e-113 413.3 311 62.1
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 3.0e-113 412.5 300 64.7
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 3.9e-113 412.1 311 64.3
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 5.0e-113 411.8 301 66.1
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 8.6e-113 411.0 300 65.7
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 1.1e-112 410.6 302 64.2
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 2.5e-112 409.5 316 62.3
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 3.3e-112 409.1 324 60.8
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 4.3e-112 408.7 332 60.2
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 1.2e-111 407.1 306 61.8
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 2.8e-111 406.0 326 62.3
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 4.7e-111 405.2 322 59.3
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 6.2e-111 404.8 302 62.3
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 8.0e-111 404.4 300 62.0
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 1.1e-110 404.1 293 64.5
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 4.0e-110 402.1 434 49.5
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 8.9e-110 401.0 319 61.8
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 8.9e-110 401.0 312 61.2
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 8.3e-108 394.4 301 61.5
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 8.3e-108 394.4 302 60.6
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 1.9e-107 393.3 295 61.0
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 1.9e-107 393.3 298 61.1
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 4.1e-107 392.1 289 63.7
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 5.4e-107 391.7 300 60.3
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 7.1e-107 391.3 307 60.3
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 9.2e-107 391.0 285 64.9
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 4.6e-106 388.7 298 61.4
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 4.6e-106 388.7 450 47.1
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 2.5e-104 382.9 297 59.9
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 1.4e-102 377.1 335 54.6
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 2.3e-102 376.3 303 57.4
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 7.1e-99 364.8 291 59.8
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 2.7e-98 362.8 292 60.3
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 4.3e-96 355.5 301 56.5
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 9.6e-96 354.4 290 59.0
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 9.3e-91 337.8 300 57.3
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 3.5e-90 335.9 319 51.4
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 3.9e-89 332.4 300 53.3
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 4.0e-86 322.4 324 51.2
Medtr4g098510 Medicago truncatula HOM05D007134 ORTHO05D009004 1.4e-83 313.9 243 62.6
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 2.0e-77 293.5 311 45.7
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 3.0e-73 279.6 309 44.0
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 6.7e-73 278.5 180 69.4
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 5.1e-65 252.3 318 40.3
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 3.1e-62 243.0 151 74.2
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.3e-55 221.1 298 40.6
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 6.5e-52 208.8 259 40.2
VMungo0251G0585 Vigna mungo HOM05D007134 ORTHO05D009004 5.0e-44 182.6 138 63.0
SEGI_12545 Sequoiadendron giganteum HOM05D007134 ORTHO05D009004 7.0e-38 162.2 116 66.4
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 2.5e-35 153.7 89 71.9
Nn6g33134 Nelumbo nucifera HOM05D007134 ORTHO05D009004 6.6e-12 75.9 70 54.3
Cre09.g398150 Chlamydomonas reinhardtii HOM05D007134 ORTHO05D009004 1.8e-06 57.8 162 27.8


User provided reference genes

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