Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G169900 Manihot esculenta HOM05D007785 ORTHO05D008997 2.5e-37 158.3 81 100.0
Potri.001G145066 Populus trichocarpa HOM05D007785 ORTHO05D008997 6.6e-14 80.5 77 58.4
Sabra01G0113200 Salix brachista HOM05D007785 ORTHO05D008997 6.2e-12 73.9 76 52.6
Actinidia05806 Actinidia chinensis HOM05D007785 ORTHO05D008997 5.2e-11 70.9 76 56.6
Potri.003G089100 Populus trichocarpa HOM05D007785 ORTHO05D008997 5.2e-11 70.9 77 54.5
CSS0006779 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 2.0e-10 68.9 77 51.9
ECA234G3743 Erigeron canadensis HOM05D007785 ORTHO05D008997 2.0e-10 68.9 77 53.2
Cc02_g26020 Coffea canephora HOM05D007785 ORTHO05D008997 2.6e-10 68.6 80 55.0
Dinv28928 Davidia involucrata HOM05D007785 ORTHO05D008997 2.6e-10 68.6 81 51.9
Atru.chr5.15 Acer truncatum HOM05D007785 ORTHO05D008997 3.4e-10 68.2 77 50.6
Nn1g00585 Nelumbo nucifera HOM05D007785 ORTHO05D008997 3.4e-10 68.2 77 53.2
Thecc.03G232200 Theobroma cacao HOM05D012518 ORTHO05D008997 3.4e-10 68.2 78 47.4
Peaxi162Scf00901g00032 Petunia axillaris HOM05D007785 ORTHO05D008997 4.4e-10 67.8 77 50.6
TAR375G1071 Trochodendron aralioides HOM05D007785 ORTHO05D008997 5.8e-10 67.4 72 55.6
Cc08_g02350 Coffea canephora HOM05D007785 ORTHO05D008997 1.3e-09 66.2 71 52.1
TAR636G3686 Trochodendron aralioides HOM05D007785 ORTHO05D008997 1.7e-09 65.9 77 49.4
CiPaw.13G020000 Carya illinoinensis HOM05D007785 ORTHO05D008997 2.2e-09 65.5 77 53.2
MSTRG.17094 Avicennia marina HOM05D007785 ORTHO05D008997 2.9e-09 65.1 82 48.8
Hma1.2p1_0021F.1_g014470 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 3.7e-09 64.7 81 46.9
Peaxi162Scf01144g00004 Petunia axillaris HOM05D007785 ORTHO05D008997 3.7e-09 64.7 83 47.0
QL04p025073 Quercus lobata HOM05D007785 ORTHO05D008997 4.9e-09 64.3 77 49.4
Dinv43998 Davidia involucrata HOM05D007785 ORTHO05D008997 1.4e-08 62.8 66 54.5
RcHm_v2.0_Chr1g0341401 Rosa chinensis HOM05D007785 ORTHO05D008997 1.9e-08 62.4 76 51.3
BcaC05g27853 Brassica carinata HOM05D010231 ORTHO05D012284 2.4e-08 62.0 75 46.7
BolC5t32585H Brassica oleracea HOM05D010231 ORTHO05D012284 2.4e-08 62.0 75 46.7
Glyma.01G199900 Glycine max HOM05D007785 ORTHO05D008997 4.1e-08 61.2 72 54.2
Hma1.2p1_0601F.1_g187290 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 4.1e-08 61.2 79 51.9
Oeu021958.1 Olea europaea HOM05D007785 ORTHO05D008997 5.4e-08 60.8 78 48.7
Migut.B01462 Erythranthe guttata HOM05D007785 ORTHO05D008997 7.1e-08 60.5 79 45.6
Gohir.A03G002300 Gossypium hirsutum HOM05D012518 ORTHO05D008997 7.1e-08 60.5 77 44.2
Lalb_Chr09g0329531 Lupinus albus HOM05D007785 ORTHO05D008997 7.1e-08 60.5 72 54.2
A05p24820 Brassica napus HOM05D010231 ORTHO05D012284 9.2e-08 60.1 72 48.6
BraA05t21365Z Brassica rapa HOM05D010231 ORTHO05D012284 9.2e-08 60.1 72 48.6
COL.COLO4_17092 Corchorus olitorius HOM05D012518 ORTHO05D008997 9.2e-08 60.1 78 43.6
Gohir.D03G170000 Gossypium hirsutum HOM05D012518 ORTHO05D008997 9.2e-08 60.1 77 42.9
Gorai.003G180300 Gossypium raimondii HOM05D012518 ORTHO05D008997 9.2e-08 60.1 77 42.9
Gorai.013G013800 Gossypium raimondii HOM05D007785 ORTHO05D008997 9.2e-08 60.1 78 48.7
Hund11261 Selenicereus undatus HOM05D018059 ORTHO05D008997 9.2e-08 60.1 81 45.7
Solyc01g080890.2 Solanum lycopersicum HOM05D007785 ORTHO05D008997 9.2e-08 60.1 78 51.3
Aqoxy3G02467 Aquilegia oxysepala HOM05D007785 ORTHO05D008997 1.2e-07 59.7 77 46.8
BcaB03g13730 Brassica carinata HOM05D010231 ORTHO05D012284 1.2e-07 59.7 79 45.6
Gohir.A13G011800 Gossypium hirsutum HOM05D007785 ORTHO05D008997 1.2e-07 59.7 78 48.7
Phvul.002G005800 Phaseolus vulgaris HOM05D007785 ORTHO05D008997 1.2e-07 59.7 71 47.9
Glyma.11G042100 Glycine max HOM05D007785 ORTHO05D008997 1.6e-07 59.3 71 47.9
Nitab4.5_0000166g0090 Nicotiana tabacum HOM05D007785 ORTHO05D008997 1.6e-07 59.3 73 54.8
AUR62041587 Chenopodium quinoa HOM05D018059 ORTHO05D008997 2.1e-07 58.9 79 45.6
Nn6g33639 Nelumbo nucifera HOM05D007785 ORTHO05D008997 2.1e-07 58.9 72 48.6
Sopen01g032480 Solanum pennellii HOM05D007785 ORTHO05D008997 2.1e-07 58.9 78 50.0
Gohir.D13G012700 Gossypium hirsutum HOM05D007785 ORTHO05D008997 2.7e-07 58.5 73 49.3
TAR374G0344 Trochodendron aralioides HOM05D007785 ORTHO05D008997 2.7e-07 58.5 76 47.4
MD07G1083000 Malus domestica HOM05D007785 ORTHO05D008997 3.5e-07 58.2 76 46.1
PGSC0003DMG400001700 Solanum tuberosum HOM05D007785 ORTHO05D008997 3.5e-07 58.2 76 51.3
Haze_02930 Corylus avellana HOM05D007785 ORTHO05D008997 4.6e-07 57.8 77 49.4
Nitab4.5_0006705g0010 Nicotiana tabacum HOM05D007785 ORTHO05D008997 4.6e-07 57.8 71 53.5
Nitab4.5_0003887g0040 Nicotiana tabacum HOM05D007785 ORTHO05D008997 6.0e-07 57.4 66 53.0
AUR62033093 Chenopodium quinoa HOM05D018059 ORTHO05D008997 7.8e-07 57.0 76 46.1
Migut.N01702 Erythranthe guttata HOM05D007785 ORTHO05D008997 7.8e-07 57.0 78 41.0
FvH4_7g07910 Fragaria vesca HOM05D007785 ORTHO05D008997 7.8e-07 57.0 76 48.7
FAN06G1471 Fragaria x ananassa HOM05D007785 ORTHO05D008997 7.8e-07 57.0 76 48.7
FAN10G3075 Fragaria x ananassa HOM05D007785 ORTHO05D008997 7.8e-07 57.0 76 48.7
Nitab4.5_0001476g0130 Nicotiana tabacum HOM05D007785 ORTHO05D008997 7.8e-07 57.0 71 50.7
Rhsim01G0145700 Rhododendron simsii HOM05D007785 ORTHO05D008997 7.8e-07 57.0 77 45.5
SalBow4G1855 Salvia bowleyana HOM05D007785 ORTHO05D008997 7.8e-07 57.0 78 42.3
CSS0013282 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 1.0e-06 56.6 76 47.4
CSS0022493 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 1.3e-06 56.2 70 48.6
Ciclev10033202m.g Citrus clementina HOM05D007785 ORTHO05D008997 1.3e-06 56.2 76 44.7
MD02G1229100 Malus domestica HOM05D007785 ORTHO05D008997 1.3e-06 56.2 76 43.4
Sp1g28440 Schrenkiella parvula HOM05D010231 ORTHO05D012284 3.0e-06 55.1 71 45.1
Gohir.D08G179100 Gossypium hirsutum HOM05D012518 ORTHO05D008997 5.1e-06 54.3 67 46.3
Prupe.2G109900 Prunus persica HOM05D007785 ORTHO05D008997 5.1e-06 54.3 87 41.4
Gohir.A08G158700 Gossypium hirsutum HOM05D012518 ORTHO05D008997 6.6e-06 53.9 60 51.7
HanXRQChr16g0520951 Helianthus annuus HOM05D007785 ORTHO05D008997 6.6e-06 53.9 76 47.4


User provided reference genes

Program Settings