Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G169350 Manihot esculenta HOM05D013164 ORTHO05D013587 4.7e-101 371.3 204 100.0
Manes.05G086320 Manihot esculenta HOM05D013164 ORTHO05D013587 1.9e-89 332.8 196 90.8
Manes.07G091751 Manihot esculenta HOM05D013164 ORTHO05D013587 1.9e-89 332.8 196 90.8
Manes.S022953 Manihot esculenta HOM05D013164 ORTHO05D013587 1.9e-89 332.8 196 90.8
Manes.14G173833 Manihot esculenta HOM05D013164 ORTHO05D013587 7.1e-89 330.9 195 90.8
Manes.S032016 Manihot esculenta HOM05D013164 ORTHO05D013587 7.8e-88 327.4 196 90.8
Manes.18G143724 Manihot esculenta HOM05D013164 ORTHO05D013587 1.7e-21 107.1 161 47.2
Manes.01G056850 Manihot esculenta HOM05D013164 ORTHO05D013587 7.0e-20 101.7 141 46.1
Manes.S023053 Manihot esculenta HOM05D024245 ORTHO05D013587 4.7e-16 89.0 140 40.7
Manes.08G086133 Manihot esculenta HOM05D024245 ORTHO05D013587 3.0e-15 86.3 105 42.9
Manes.06G063050 Manihot esculenta HOM05D013164 ORTHO05D013587 1.5e-14 84.0 125 39.2
Sopen07g005880 Solanum pennellii HOM05D000004 ORTHO05D003926 8.0e-08 61.6 71 45.1
Sopen12g024640 Solanum pennellii HOM05D013164 ORTHO05D003926 1.0e-07 61.2 42 59.5
PGSC0003DMG400037751 Solanum tuberosum HOM05D000004 ORTHO05D000034 1.4e-07 60.8 40 65.0
Rhsim11G0020300 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.8e-07 60.5 87 37.9
SHI49393 Sapria himalayana HOM05D000004 ORTHO05D000002 1.8e-07 60.5 35 68.6
PGSC0003DMG400035219 Solanum tuberosum HOM05D000004 ORTHO05D003926 1.8e-07 60.5 42 54.8
PGSC0003DMG400046383 Solanum tuberosum HOM05D000004 ORTHO05D003926 3.0e-07 59.7 42 54.8
Sopen03g020990 Solanum pennellii HOM05D000004 ORTHO05D000002 5.2e-07 58.9 38 60.5
Sopen06g006090 Solanum pennellii HOM05D000004 ORTHO05D000034 6.8e-07 58.5 128 35.2
PGSC0003DMG400040814 Solanum tuberosum HOM05D000004 ORTHO05D000034 6.8e-07 58.5 39 56.4
THA.LOC109116282 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 6.8e-07 58.5 79 45.6
Sopen03g011640 Solanum pennellii HOM05D000014 ORTHO05D000016 8.8e-07 58.2 71 36.6
Sopen10g009240 Solanum pennellii HOM05D000004 ORTHO05D003926 8.8e-07 58.2 39 56.4
Sopen10g015100 Solanum pennellii HOM05D000004 ORTHO05D000034 1.2e-06 57.8 51 49.0
Sopen12g025570 Solanum pennellii HOM05D000004 ORTHO05D000034 1.2e-06 57.8 40 60.0
arahy.Tifrunner.gnm1.ann1.8BX9LS Arachis hypogaea HOM05D000004 ORTHO05D000002 1.5e-06 57.4 84 36.9
Haze_01590 Corylus avellana HOM05D063246 ORTHO05D013587 1.5e-06 57.4 33 60.6
Sopen03g026420 Solanum pennellii HOM05D000004 ORTHO05D000034 1.5e-06 57.4 73 43.8
Sopen11g023810 Solanum pennellii HOM05D000004 ORTHO05D000034 1.5e-06 57.4 39 59.0
Sopen12g025600 Solanum pennellii HOM05D000004 ORTHO05D000034 1.5e-06 57.4 72 40.3
SHI45768 Sapria himalayana HOM05D000004 ORTHO05D000002 2.0e-06 57.0 60 46.7
Rhsim03G0184300 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.6e-06 56.6 75 42.7
Sopen01g022870 Solanum pennellii HOM05D000004 ORTHO05D000034 2.6e-06 56.6 73 32.9
Sopen01g027520 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-06 56.6 45 46.7
Sopen08g006160 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-06 56.6 44 50.0
arahy.Tifrunner.gnm1.ann1.SV62YW Arachis hypogaea HOM05D000004 ORTHO05D000002 3.4e-06 56.2 85 37.6
CSS0025076 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 3.4e-06 56.2 80 41.2
Sopen04g024100 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-06 56.2 39 59.0
Sopen09g022690 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-06 56.2 33 60.6
Sopen12g027050 Solanum pennellii HOM05D000004 ORTHO05D000034 3.4e-06 56.2 71 39.4
Rhsim10G0111000 Rhododendron simsii HOM05D000004 ORTHO05D000034 4.4e-06 55.8 63 44.4
Sopen06g006510 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-06 55.8 79 35.4
Sopen08g006680 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-06 55.8 49 44.9
Sopen08g013490 Solanum pennellii HOM05D000014 ORTHO05D000016 4.4e-06 55.8 79 35.4
Sopen10g013550 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-06 55.8 67 35.8
Sopen12g028350 Solanum pennellii HOM05D000004 ORTHO05D000034 4.4e-06 55.8 69 40.6
PGSC0003DMG400034341 Solanum tuberosum HOM05D000004 ORTHO05D003926 4.4e-06 55.8 47 51.1
Thecc.07G165400 Theobroma cacao HOM05D010356 ORTHO05D013587 4.4e-06 55.8 66 48.5
MELO3C030797.2 Cucumis melo HOM05D000004 ORTHO05D000002 5.7e-06 55.5 48 47.9
Oeu036689.1 Olea europaea HOM05D009054 ORTHO05D000034 5.7e-06 55.5 37 54.1
Oeu061602.1 Olea europaea HOM05D009054 ORTHO05D000034 5.7e-06 55.5 40 50.0
Sopen02g001840 Solanum pennellii HOM05D000004 ORTHO05D000034 5.7e-06 55.5 42 54.8
Sopen07g009920 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-06 55.5 33 60.6
Sopen07g018440 Solanum pennellii HOM05D000014 ORTHO05D000016 5.7e-06 55.5 102 29.4
THA.LOC109117126 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 5.7e-06 55.5 80 43.8
Oeu036411.1 Olea europaea HOM05D009054 ORTHO05D000034 7.5e-06 55.1 37 54.1
Sopen05g010700 Solanum pennellii HOM05D000004 ORTHO05D000002 7.5e-06 55.1 33 60.6
Sopen08g007000 Solanum pennellii HOM05D000004 ORTHO05D000034 7.5e-06 55.1 49 46.9
Sopen08g010440 Solanum pennellii HOM05D000004 ORTHO05D000002 7.5e-06 55.1 33 60.6
PGSC0003DMG400034641 Solanum tuberosum HOM05D000004 ORTHO05D000034 7.5e-06 55.1 42 52.4
PGSC0003DMG400037232 Solanum tuberosum HOM05D000004 ORTHO05D003926 7.5e-06 55.1 33 63.6
CAN.G641.7 Capsicum annuum HOM05D000092 ORTHO05D000042 9.8e-06 54.7 73 41.1
Sopen01g008910 Solanum pennellii HOM05D000004 ORTHO05D000034 9.8e-06 54.7 39 59.0
Sopen03g010070 Solanum pennellii HOM05D000004 ORTHO05D003926 9.8e-06 54.7 39 53.8
Sopen03g037420 Solanum pennellii HOM05D000004 ORTHO05D000034 9.8e-06 54.7 44 45.5
Sopen05g020580 Solanum pennellii HOM05D000004 ORTHO05D000002 9.8e-06 54.7 34 58.8
Sopen09g013240 Solanum pennellii HOM05D000004 ORTHO05D000034 9.8e-06 54.7 33 57.6
Sopen11g010360 Solanum pennellii HOM05D000004 ORTHO05D000034 9.8e-06 54.7 73 37.0
Sopen12g015720 Solanum pennellii HOM05D000004 ORTHO05D000002 9.8e-06 54.7 44 45.5


User provided reference genes

Program Settings