Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G168650 Manihot esculenta HOM05D007305 ORTHO05D009886 1.8e-99 365.9 187 100.0
Manes.01G039012 Manihot esculenta HOM05D007305 ORTHO05D009886 3.5e-95 351.7 197 93.4
Manes.15G035050 Manihot esculenta HOM05D007305 ORTHO05D009886 6.1e-79 297.7 190 83.7
Manes.15G058801 Manihot esculenta HOM05D007305 ORTHO05D009886 9.1e-67 257.3 190 74.7
Manes.09G001301 Manihot esculenta HOM05D007305 ORTHO05D009886 1.7e-57 226.5 197 66.5
Manes.02G211261 Manihot esculenta HOM05D007305 ORTHO05D009886 1.2e-47 193.7 129 78.3
CANSAT78G2514 Cannabis sativa HOM05D007305 ORTHO05D009886 2.3e-46 189.5 193 56.0
Manes.13G105340 Manihot esculenta HOM05D007305 ORTHO05D009886 8.8e-46 187.6 151 68.9
Manes.13G079525 Manihot esculenta HOM05D007305 ORTHO05D009886 4.5e-42 175.3 114 79.8
Manes.18G104116 Manihot esculenta HOM05D007305 ORTHO05D009886 3.3e-40 169.1 107 80.4
Manes.16G035125 Manihot esculenta HOM05D007305 ORTHO05D009886 1.2e-39 167.2 123 71.5
Sabra07G0082100 Salix brachista HOM05D007305 ORTHO05D009886 2.3e-38 162.9 190 52.1
Sabra17G0125400 Salix brachista HOM05D007305 ORTHO05D009886 2.3e-38 162.9 190 52.1
Manes.05G187732 Manihot esculenta HOM05D007305 ORTHO05D009886 5.2e-38 161.8 111 75.7
Sabra18G0102700 Salix brachista HOM05D007305 ORTHO05D009886 2.2e-36 156.4 189 49.7
Manes.08G072166 Manihot esculenta HOM05D007305 ORTHO05D009886 5.6e-32 141.7 116 66.4
Manes.18G035550 Manihot esculenta HOM05D007305 ORTHO05D009886 1.2e-31 140.6 110 69.1
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 2.2e-28 129.8 166 49.4
Sabra16G0035300 Salix brachista HOM05D007305 ORTHO05D009886 4.9e-28 128.6 166 49.4
Sabra06G0016700 Salix brachista HOM05D000027 ORTHO05D000066 1.9e-27 126.7 148 50.7
Manes.07G072314 Manihot esculenta HOM05D007305 ORTHO05D009886 3.2e-27 125.9 83 81.9
Sabra04G0080000 Salix brachista HOM05D007305 ORTHO05D009886 7.0e-27 124.8 166 48.8
Manes.06G147450 Manihot esculenta HOM05D007305 ORTHO05D009886 7.8e-26 121.3 96 71.9
Manes.02G001425 Manihot esculenta HOM05D000002 ORTHO05D000001 4.0e-22 109.0 69 85.5
SHI21600 Sapria himalayana HOM05D000002 ORTHO05D009886 2.0e-21 106.7 179 40.8
SHI20378 Sapria himalayana HOM05D000002 ORTHO05D009886 9.8e-21 104.4 188 37.2
Manes.06G030066 Manihot esculenta HOM05D007305 ORTHO05D009886 1.3e-20 104.0 86 68.6
SHI14644 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-20 102.4 183 36.6
Gorai.006G052700 Gossypium raimondii HOM05D056255 ORTHO05D047221 8.3e-20 101.3 176 38.6
TWI73G0357 Tripterygium wilfordii HOM05D023524 ORTHO05D009886 1.2e-18 97.4 220 37.7
SHI35106 Sapria himalayana HOM05D007305 ORTHO05D009886 2.1e-18 96.7 158 41.8
Manes.09G019650 Manihot esculenta HOM05D007305 ORTHO05D009886 6.0e-18 95.1 60 81.7
SHI07334 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-16 90.9 191 38.7
SHI00069 Sapria himalayana HOM05D000002 ORTHO05D009886 1.2e-15 87.4 187 34.2
Manes.13G089260 Manihot esculenta HOM05D007305 ORTHO05D009886 8.1e-15 84.7 60 76.7
SHI15390 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-14 84.3 184 37.0
SHI12340 Sapria himalayana HOM05D000002 ORTHO05D009886 6.8e-14 81.6 153 39.9
SHI22311 Sapria himalayana HOM05D000002 ORTHO05D000001 8.9e-14 81.3 186 36.0
SHI14083 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-13 80.1 177 37.9
SHI34552 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-13 79.3 185 36.8
SHI02940 Sapria himalayana HOM05D000002 ORTHO05D000001 5.8e-13 78.6 185 36.2
SHI29361 Sapria himalayana HOM05D000002 ORTHO05D000001 5.8e-13 78.6 185 33.5
SHI09975 Sapria himalayana HOM05D000002 ORTHO05D000001 7.6e-13 78.2 185 35.1
SHI25917 Sapria himalayana HOM05D000002 ORTHO05D000001 7.6e-13 78.2 185 35.7
SHI32183 Sapria himalayana HOM05D000002 ORTHO05D000001 9.9e-13 77.8 185 33.5
SHI11625 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-12 77.4 187 33.2
SHI12565 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-12 77.4 185 36.2
SHI23673 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-12 77.4 185 34.6
SHI06777 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-12 77.0 189 34.9
SHI08885 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-12 76.6 185 34.1
Sabra11G0081600 Salix brachista HOM05D007305 ORTHO05D009886 2.9e-12 76.3 120 42.5
SHI32097 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-12 76.3 185 34.1
SHI32977 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-12 76.3 185 34.1
SHI14291 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-12 75.9 185 33.0
SHI23844 Sapria himalayana HOM05D000002 ORTHO05D000001 6.4e-12 75.1 185 33.0
SHI21519 Sapria himalayana HOM05D000002 ORTHO05D000001 8.4e-12 74.7 185 34.6
SHI27632 Sapria himalayana HOM05D000002 ORTHO05D000001 8.4e-12 74.7 185 34.1
SHI03750 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-11 74.3 185 35.1
SHI14921 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-11 74.3 186 34.4
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-11 73.9 186 35.5
Sed0002096 Sechium edule HOM05D007305 ORTHO05D009886 1.4e-11 73.9 110 42.7
SHI03307 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-11 73.6 185 33.0
SHI32732 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-11 73.2 186 32.8
Manes.12G129950 Manihot esculenta HOM05D000002 ORTHO05D000001 3.2e-11 72.8 194 32.0
SHI16752 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-11 72.8 186 35.5
SHI25695 Sapria himalayana HOM05D000002 ORTHO05D000001 7.1e-11 71.6 188 34.0
SHI40520 Sapria himalayana HOM05D000002 ORTHO05D000001 7.1e-11 71.6 186 33.9
SHI20242 Sapria himalayana HOM05D000002 ORTHO05D000001 9.2e-11 71.2 185 33.5
Cpa.g.sc37.32 Carica papaya HOM05D007305 ORTHO05D009886 1.6e-10 70.5 153 35.3
SHI22147 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-10 70.5 183 32.2
SHI27844 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-10 70.5 185 34.1
SHI03781 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-10 70.1 185 31.9
TWI79G0335 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 2.1e-10 70.1 204 28.4
Manes.13G009802 Manihot esculenta HOM05D000002 ORTHO05D000001 2.7e-10 69.7 199 31.2
SHI01799 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-10 69.7 185 31.9
SHI11084 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-10 69.7 185 33.5
SHI11086 Sapria himalayana HOM05D007305 ORTHO05D009886 2.7e-10 69.7 176 36.4
SHI11377 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-10 69.7 186 32.8
SHI14540 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-10 69.7 185 34.6
Sopen11g023560 Solanum pennellii HOM05D000002 ORTHO05D000001 3.5e-10 69.3 62 61.3
SHI07176 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-10 68.9 185 34.1
SHI21345 Sapria himalayana HOM05D000002 ORTHO05D009886 4.6e-10 68.9 185 31.4
SHI24178 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-10 68.9 185 32.4
CAN.G710.25 Capsicum annuum HOM05D000011 ORTHO05D007164 7.8e-10 68.2 188 30.9
CSS0019150 Camellia sinensis var. sinensis HOM05D000936 ORTHO05D005107 1.0e-09 67.8 193 31.6
Gohir.D09G054350 Gossypium hirsutum HOM05D056255 ORTHO05D047221 1.0e-09 67.8 112 38.4
SHI49787 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-09 67.8 185 33.0
SHI09499 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-09 67.4 193 33.2
SHI27215 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-09 67.4 185 32.4
TWI14G0936 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 1.3e-09 67.4 211 29.4
TWI74G0014 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 1.3e-09 67.4 210 27.6
SHI06859 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-09 67.0 179 31.8
SHI50423 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-09 67.0 184 35.9
CSS0002432 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-09 66.6 222 32.0
CSS0038420 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-09 66.6 209 33.5
SHI15483 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-09 66.6 185 31.9
SHI15625 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-09 66.6 186 33.3
SHI24173 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-09 66.6 185 31.9
SHI26413 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-09 66.6 185 33.5
SHI27053 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-09 64.7 185 32.4
SHI10616 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-08 64.3 186 33.3
SHI23873 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-08 64.3 185 34.1
SHI36811 Sapria himalayana HOM05D007305 ORTHO05D009886 1.1e-08 64.3 93 40.9
SHI36830 Sapria himalayana HOM05D007305 ORTHO05D009886 1.1e-08 64.3 93 40.9
SHI07494 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-08 63.9 185 33.0
SHI26358 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-08 63.2 185 33.0
SHI05330 Sapria himalayana HOM05D001596 ORTHO05D000001 3.3e-08 62.8 185 33.0
SHI10701 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-08 62.8 185 31.4
SHI23173 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-08 62.8 189 32.8
SHI17232 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-08 62.4 185 31.9
SHI17479 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-08 62.0 159 34.6
Cc10_g11590 Coffea canephora HOM05D002761 ORTHO05D003351 7.3e-08 61.6 56 64.3
Manes.16G056009 Manihot esculenta HOM05D000002 ORTHO05D000001 7.3e-08 61.6 197 29.4
QL02p002557 Quercus lobata HOM05D000002 ORTHO05D000001 7.3e-08 61.6 213 29.1
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 7.3e-08 61.6 213 29.1
SHI01660 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-08 61.6 169 33.1
SHI07508 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-08 61.6 185 31.9
SHI33187 Sapria himalayana HOM05D000002 ORTHO05D000001 9.6e-08 61.2 185 30.3
SHI22286 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-07 60.8 186 32.3
SHI29161 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-07 60.8 189 30.2
SHI49078 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-07 60.5 185 33.0
SHI14439 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-07 60.1 185 33.5
SHI41210 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-07 60.1 183 31.7
SHI14497 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-07 59.7 185 32.4
SHI05993 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-07 59.3 182 32.4
SHI32815 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-07 58.9 182 30.2
SHI23559 Sapria himalayana HOM05D000002 ORTHO05D000001 8.1e-07 58.2 186 34.4
SHI34296 Sapria himalayana HOM05D000002 ORTHO05D000001 8.1e-07 58.2 183 30.6
SHI11777 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-06 57.4 138 36.2
SHI30441 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-06 57.4 185 32.4
SHI30603 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-06 57.4 185 31.4
SHI00649 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-06 57.0 185 33.5
SHI03814 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-06 57.0 186 31.2
SHI03492 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-06 56.2 186 31.7
Oeu056823.1 Olea europaea HOM05D023524 ORTHO05D009886 4.0e-06 55.8 105 35.2
SHI26070 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-06 55.8 92 38.0
ClCG11G008610 Citrullus lanatus HOM05D000002 ORTHO05D000001 5.2e-06 55.5 192 30.2
SHI06898 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-06 55.5 119 37.0
SHI09366 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-06 55.5 189 30.7
SHI31578 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-06 55.5 83 44.6
Ah.07g205280 Amaranthus hybridus HOM05D000002 ORTHO05D000001 6.8e-06 55.1 202 23.8
SHI27171 Sapria himalayana HOM05D000002 ORTHO05D000001 6.8e-06 55.1 181 28.2
CANSAT80G2584 Cannabis sativa HOM05D000002 ORTHO05D000047 8.9e-06 54.7 212 27.8
Glyma.14G105250 Glycine max HOM05D041015 ORTHO05D035944 8.9e-06 54.7 169 29.0
SHI04188 Sapria himalayana HOM05D000002 ORTHO05D000001 8.9e-06 54.7 193 28.5


User provided reference genes

Program Settings