Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G153500 Manihot esculenta HOM05D007617 ORTHO05D007195 4.2e-69 264.6 138 100.0
Atru.chr6.2453 Acer truncatum HOM05D007617 ORTHO05D007195 1.2e-12 77.0 138 42.8
Potri.001G340100 Populus trichocarpa HOM05D007617 ORTHO05D007195 1.6e-12 76.6 139 41.7
QL02p073546 Quercus lobata HOM05D007617 ORTHO05D007195 1.1e-11 73.9 145 41.4
TAR374G0075 Trochodendron aralioides HOM05D007617 ORTHO05D007195 1.2e-10 70.5 118 43.2
Ciclev10017789m.g Citrus clementina HOM05D007617 ORTHO05D007195 7.5e-10 67.8 144 41.7
Lalb_Chr02g0158101 Lupinus albus HOM05D007617 ORTHO05D007195 6.4e-09 64.7 142 40.1
Ciclev10022896m.g Citrus clementina HOM05D007617 ORTHO05D007195 1.9e-08 63.2 101 48.5
Glyma.19G053100 Glycine max HOM05D007617 ORTHO05D007195 4.1e-08 62.0 140 38.6
Prupe.3G296000 Prunus persica HOM05D007617 ORTHO05D007195 5.4e-08 61.6 148 39.2
Lalb_Chr21g0317701 Lupinus albus HOM05D007617 ORTHO05D007195 7.1e-08 61.2 146 41.1
CiPaw.03G047400 Carya illinoinensis HOM05D007617 ORTHO05D007195 9.2e-08 60.8 145 37.2
CiPaw.09G026700 Carya illinoinensis HOM05D007617 ORTHO05D007195 9.2e-08 60.8 145 37.2
vmacro18302 Vaccinium macrocarpon HOM05D007617 ORTHO05D007195 1.2e-07 60.5 140 37.1
Medtr1g093790 Medicago truncatula HOM05D007617 ORTHO05D007195 1.6e-07 60.1 142 37.3
Glyma.05G114700 Glycine max HOM05D007617 ORTHO05D007195 3.5e-07 58.9 143 39.9
CANSAT64G0294 Cannabis sativa HOM05D007617 ORTHO05D007195 4.6e-07 58.5 147 40.1
Cfa007314 Carpinus fangiana HOM05D000615 ORTHO05D007195 6.0e-07 58.2 148 37.2
TPR.G31739 Trifolium pratense HOM05D007617 ORTHO05D007195 6.0e-07 58.2 143 37.1
Ca_11155_v3 Cicer arietinum L. HOM05D007617 ORTHO05D007195 1.7e-06 56.6 141 38.3
Ca_11158_v3 Cicer arietinum L. HOM05D007617 ORTHO05D007195 1.7e-06 56.6 141 38.3
Hma1.2p1_0818F.1_g223400 Hydrangea macrophylla HOM05D007617 ORTHO05D007195 2.3e-06 56.2 144 38.9
Manes.06G112400 Manihot esculenta HOM05D007617 ORTHO05D007195 2.3e-06 56.2 148 36.5
Phvul.004G059700 Phaseolus vulgaris HOM05D007617 ORTHO05D007195 3.9e-06 55.5 139 37.4
PGR142G0897 Punica granatum HOM05D007617 ORTHO05D007195 3.9e-06 55.5 145 38.6
DCAR_011273 Daucus carota HOM05D007617 ORTHO05D007195 5.1e-06 55.1 141 38.3
Psat6g179560 Pisum sativum HOM05D007617 ORTHO05D007195 6.6e-06 54.7 144 41.0
Potri.012G090700 Populus trichocarpa HOM05D007617 ORTHO05D007195 6.6e-06 54.7 142 34.5
Sed0018064 Sechium edule HOM05D007617 ORTHO05D007195 6.6e-06 54.7 141 42.6
Sopen02g017030 Solanum pennellii HOM05D007617 ORTHO05D007195 6.6e-06 54.7 72 54.2
SGA_v2.0_scaffold30G12404 Striga asiatica HOM05D007617 ORTHO05D007195 8.6e-06 54.3 147 37.4


User provided reference genes

Program Settings