Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G153266 Manihot esculenta HOM05D012182 ORTHO05D011238 8.4e-93 344.4 279 100.0
Manes.18G062550 Manihot esculenta HOM05D012182 ORTHO05D011238 1.6e-62 243.8 281 68.0
Manes.14G163433 Manihot esculenta HOM05D012182 ORTHO05D011238 1.8e-55 220.3 281 81.5
Manes.06G045801 Manihot esculenta HOM05D012182 ORTHO05D011238 1.2e-54 217.6 279 55.6
Manes.14G027972 Manihot esculenta HOM05D012182 ORTHO05D000014 5.5e-52 208.8 285 78.6
Manes.07G082254 Manihot esculenta HOM05D012182 ORTHO05D011238 1.5e-49 200.7 131 88.5
Manes.05G127901 Manihot esculenta HOM05D012182 ORTHO05D011238 2.9e-45 186.4 126 88.1
Manes.18G138854 Manihot esculenta HOM05D012182 ORTHO05D011238 1.1e-44 184.5 129 85.3
Manes.17G022697 Manihot esculenta HOM05D012182 ORTHO05D011238 4.2e-44 182.6 210 83.3
Manes.04G059132 Manihot esculenta HOM05D012182 ORTHO05D011238 1.0e-37 161.4 131 77.9
Manes.02G210140 Manihot esculenta HOM05D000023 ORTHO05D000014 1.3e-16 91.3 70 64.3
CSS0017579 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.0e-13 81.6 52 69.2
CSS0044422 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.0e-13 81.6 52 69.2
CSS0049353 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.0e-13 81.6 52 69.2
CSS0045728 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.3e-13 81.3 52 67.3
CSS0004804 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.3e-13 80.5 52 69.2
CSS0006701 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.3e-13 80.5 52 67.3
CSS0026734 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.0e-13 80.1 52 67.3
Dinv15899 Davidia involucrata HOM05D013973 ORTHO05D011238 3.0e-13 80.1 94 45.7
CSS0045108 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.5e-12 77.8 52 67.3
Dinv21131 Davidia involucrata HOM05D013973 ORTHO05D011238 4.3e-12 76.3 84 47.6
Manes.09G075056 Manihot esculenta HOM05D012182 ORTHO05D011238 2.1e-11 73.9 82 52.4
Dinv01017 Davidia involucrata HOM05D013973 ORTHO05D011238 4.0e-10 69.7 81 44.4
Ah.03g144780 Amaranthus hybridus HOM05D000023 ORTHO05D000014 2.0e-09 67.4 116 39.7
Actinidia31591 Actinidia chinensis HOM05D013973 ORTHO05D011238 2.6e-09 67.0 56 60.7
Hund03452 Selenicereus undatus HOM05D000185 ORTHO05D000014 1.7e-08 64.3 58 53.4
Hund20069 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.7e-08 64.3 58 55.2
Hund00853 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.2e-08 63.9 58 53.4
Gorai.010G071800 Gossypium raimondii HOM05D000023 ORTHO05D000014 2.9e-08 63.5 71 49.3
Hund10834 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.9e-08 63.5 87 43.7
Hund04216 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.8e-08 63.2 77 44.2
Hund09860 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.8e-08 63.2 77 44.2
Hund08340 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.9e-08 62.8 58 53.4
Hund26432 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.9e-08 62.8 78 42.3
AUR62017483 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.4e-08 62.4 59 50.8
Gohir.D08G172950 Gossypium hirsutum HOM05D001165 ORTHO05D001347 6.4e-08 62.4 71 49.3
Gorai.005G223300 Gossypium raimondii HOM05D000023 ORTHO05D000014 6.4e-08 62.4 71 49.3
Gorai.011G148700 Gossypium raimondii HOM05D000023 ORTHO05D000014 6.4e-08 62.4 71 49.3
Psat1g136240 Pisum sativum HOM05D008981 ORTHO05D011238 6.4e-08 62.4 132 33.3
Rhsim05G0096600 Rhododendron simsii HOM05D000023 ORTHO05D000014 6.4e-08 62.4 81 44.4
Hund09827 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.4e-08 62.4 58 51.7
Hund22679 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.4e-08 62.4 58 51.7
Duzib063G0003 Durio zibethinus HOM05D053098 ORTHO05D011238 8.4e-08 62.0 76 44.7
Ah.06g187040 Amaranthus hybridus HOM05D012182 ORTHO05D011238 1.4e-07 61.2 71 45.1
Psat7g035080 Pisum sativum HOM05D008981 ORTHO05D011238 1.4e-07 61.2 52 57.7
Hund15541 Selenicereus undatus HOM05D000023 ORTHO05D009195 1.4e-07 61.2 75 46.7
AUR62034279 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.9e-07 60.8 48 58.3
Hund17894 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.9e-07 60.8 50 56.0
Hund01377 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.4e-07 60.5 82 42.7
Hund25537 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.4e-07 60.5 70 47.1
Gohir.A01G142850 Gossypium hirsutum HOM05D000023 ORTHO05D000014 3.2e-07 60.1 50 54.0
Gorai.002G161200 Gossypium raimondii HOM05D000023 ORTHO05D000014 5.4e-07 59.3 71 47.9
Hund18171 Selenicereus undatus HOM05D000023 ORTHO05D000014 5.4e-07 59.3 58 51.7
TPR.G32077 Trifolium pratense HOM05D000023 ORTHO05D000014 5.4e-07 59.3 52 55.8
Gorai.007G113800 Gossypium raimondii HOM05D000023 ORTHO05D000014 7.1e-07 58.9 71 46.5
Gorai.011G164900 Gossypium raimondii HOM05D000023 ORTHO05D009195 7.1e-07 58.9 50 54.0
Hund04619 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.1e-07 58.9 59 47.5
Hund17666 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.1e-06 57.4 124 33.1
Hund17738 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.1e-06 57.4 55 49.1
TAR500G0002 Trochodendron aralioides HOM05D000023 ORTHO05D000014 2.1e-06 57.4 47 61.7
Gorai.007G179100 Gossypium raimondii HOM05D000023 ORTHO05D000014 2.7e-06 57.0 71 46.5
Hund19738 Selenicereus undatus HOM05D000023 ORTHO05D003407 2.7e-06 57.0 84 38.1
Hund09996 Selenicereus undatus HOM05D000023 ORTHO05D009195 4.6e-06 56.2 51 52.9
Rhsim02G0219500 Rhododendron simsii HOM05D000023 ORTHO05D000014 6.0e-06 55.8 78 41.0
RhsimUnG0127700 Rhododendron simsii HOM05D000023 ORTHO05D000014 6.0e-06 55.8 78 41.0
RhsimUnG0234800 Rhododendron simsii HOM05D000023 ORTHO05D000014 6.0e-06 55.8 78 41.0
TPR.G40251 Trifolium pratense HOM05D008981 ORTHO05D011238 7.8e-06 55.5 52 55.8


User provided reference genes

Program Settings