Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 5.7e-115 417.5 203 100.0
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 2.1e-85 319.3 201 80.6
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 3.0e-71 272.3 201 68.7
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 3.9e-71 271.9 201 67.7
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 5.1e-71 271.6 202 68.8
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 1.9e-70 269.6 201 66.2
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 1.2e-69 266.9 203 68.0
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 2.0e-67 259.6 198 64.6
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 7.6e-67 257.7 202 62.9
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 9.9e-67 257.3 197 64.5
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 6.4e-66 254.6 196 66.8
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 8.4e-66 254.2 204 62.7
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 1.4e-65 253.4 201 62.7
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 1.2e-64 250.4 203 63.5
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 1.6e-64 250.0 202 61.9
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 1.6e-64 250.0 225 60.4
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 2.7e-64 249.2 198 64.1
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 4.6e-64 248.4 204 63.2
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 1.0e-63 247.3 166 69.9
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 3.9e-63 245.4 198 62.6
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 3.9e-63 245.4 200 61.5
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 8.6e-63 244.2 198 61.1
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 1.5e-62 243.4 198 60.6
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 2.5e-62 242.7 208 59.6
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 3.3e-62 242.3 201 61.2
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 5.6e-62 241.5 205 62.0
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 9.6e-62 240.7 199 61.3
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 1.2e-61 240.4 201 61.2
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 1.2e-61 240.4 166 69.9
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 2.8e-61 239.2 203 60.6
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 3.6e-61 238.8 201 61.7
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 8.1e-61 237.7 203 60.6
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 8.1e-61 237.7 203 61.6
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.8e-60 236.5 171 66.1
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 3.1e-60 235.7 167 67.1
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 4.0e-60 235.3 201 60.7
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 6.8e-60 234.6 176 64.2
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 6.8e-60 234.6 201 59.2
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 8.9e-60 234.2 201 60.7
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 1.5e-59 233.4 203 63.1
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 2.6e-59 232.6 198 58.1
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 2.6e-59 232.6 165 66.1
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 2.2e-58 229.6 207 57.5
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 2.2e-58 229.6 196 59.2
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 2.2e-58 229.6 207 57.5
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 3.8e-58 228.8 184 61.4
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 3.8e-58 228.8 180 61.1
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 3.8e-58 228.8 180 61.1
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 1.1e-57 227.3 163 66.3
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 1.4e-57 226.9 183 60.7
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 1.9e-57 226.5 232 54.7
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 1.9e-57 226.5 157 68.2
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 2.4e-57 226.1 165 64.8
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 3.2e-57 225.7 199 56.8
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 3.2e-57 225.7 198 57.6
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 5.4e-57 224.9 165 63.6
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 1.6e-56 223.4 184 59.2
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 2.1e-56 223.0 198 58.6
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 3.5e-56 222.2 177 62.1
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 3.5e-56 222.2 157 66.9
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 6.0e-56 221.5 184 58.7
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 6.0e-56 221.5 196 56.6
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 1.0e-55 220.7 163 66.9
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 1.0e-55 220.7 178 59.6
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 1.0e-55 220.7 184 59.2
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 1.7e-55 219.9 165 63.0
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 3.0e-55 219.2 185 58.9
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 5.1e-55 218.4 197 55.3
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 1.9e-54 216.5 188 60.1
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 2.5e-54 216.1 173 60.1
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 9.6e-54 214.2 176 58.5
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 9.6e-54 214.2 167 60.5
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 1.3e-53 213.8 205 54.1
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 3.4e-51 205.7 201 57.7
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 3.4e-51 205.7 165 61.2
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 9.9e-51 204.1 209 53.1
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 1.7e-50 203.4 186 55.9
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 2.2e-50 203.0 200 53.5
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 3.8e-50 202.2 162 57.4
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 6.4e-50 201.4 164 57.9
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 6.4e-50 201.4 204 52.9
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 8.4e-50 201.1 200 50.5
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 1.1e-49 200.7 200 52.5
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 4.6e-48 195.3 227 48.5
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 6.0e-48 194.9 162 59.3
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 6.0e-48 194.9 203 51.7
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 6.0e-48 194.9 174 56.9
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 6.0e-48 194.9 174 56.9
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 6.0e-48 194.9 174 56.9
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 6.0e-48 194.9 164 58.5
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 1.0e-47 194.1 203 48.8
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 1.3e-47 193.7 201 49.8
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 2.3e-47 193.0 174 56.3
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 3.9e-47 192.2 158 58.9
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 5.1e-47 191.8 164 57.3
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 1.1e-46 190.7 174 55.7
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 1.1e-46 190.7 162 58.0
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 1.1e-46 190.7 200 48.5
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 5.6e-46 188.3 148 56.8
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 1.6e-45 186.8 205 49.3
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 4.8e-45 185.3 209 51.2
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 2.4e-44 183.0 218 48.2
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 3.1e-36 156.0 169 48.5
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 4.2e-33 145.6 144 57.6
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 2.3e-31 139.8 173 45.7
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 1.5e-30 137.1 202 38.6
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 7.4e-30 134.8 192 38.5
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 1.6e-29 133.7 192 39.6
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 4.1e-28 129.0 174 44.8
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 2.2e-26 123.2 205 37.1
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 2.5e-25 119.8 98 63.3
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 2.3e-23 113.2 90 57.8
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 3.4e-19 99.4 179 34.1
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 4.5e-19 99.0 97 52.6
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 8.5e-18 94.7 180 31.1
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 1.1e-17 94.4 210 34.3
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 6.3e-13 78.6 101 44.6
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 1.8e-12 77.0 125 35.2
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 3.1e-12 76.3 212 25.0
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 1.0e-10 71.2 105 36.2
Cfa020839 Carpinus fangiana HOM05D006662 ORTHO05D008378 1.0e-07 61.2 49 59.2
Sabra04G0096800 Salix brachista HOM05D000546 ORTHO05D000398 2.3e-07 60.1 45 60.0
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 3.0e-07 59.7 171 26.9


User provided reference genes

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