Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G133200 Manihot esculenta HOM05D006041 ORTHO05D007473 3.8e-263 911.0 473 100.0
Sabra08G0102300 Salix brachista HOM05D006041 ORTHO05D007473 5.7e-182 641.3 492 72.8
COL.COLO4_16567 Corchorus olitorius HOM05D006041 ORTHO05D007473 5.0e-178 628.2 478 71.5
Haze_10912 Corylus avellana HOM05D006041 ORTHO05D007473 3.6e-176 622.1 477 70.4
Manes.17G082400 Manihot esculenta HOM05D006041 ORTHO05D007473 2.5e-174 615.9 476 74.2
Cfa015002 Carpinus fangiana HOM05D006041 ORTHO05D007473 4.3e-174 615.1 477 70.0
Haze_10913 Corylus avellana HOM05D006041 ORTHO05D007473 6.9e-172 607.8 503 66.8
Dinv26256 Davidia involucrata HOM05D006041 ORTHO05D007473 1.5e-171 606.7 480 70.6
Cpa.g.c27573.2 Carica papaya HOM05D006041 ORTHO05D007473 7.7e-171 604.4 481 67.4
Thecc.02G290600 Theobroma cacao HOM05D006041 ORTHO05D007473 2.3e-167 592.8 480 68.3
TWI74G1002 Tripterygium wilfordii HOM05D006041 ORTHO05D007473 2.0e-166 589.7 478 67.2
Duzib268G1057 Durio zibethinus HOM05D006041 ORTHO05D007473 4.8e-165 585.1 479 68.5
Gorai.005G158800 Gossypium raimondii HOM05D006041 ORTHO05D007473 1.1e-164 583.9 484 67.1
Duzib251G0740 Durio zibethinus HOM05D006041 ORTHO05D007473 2.2e-162 576.2 479 68.1
PGR142G4228 Punica granatum HOM05D006041 ORTHO05D007473 3.9e-159 565.5 480 65.6
Ciclev10015068m.g Citrus clementina HOM05D006041 ORTHO05D007473 9.7e-158 560.8 484 62.8
Rhsim09G0037900 Rhododendron simsii HOM05D006041 ORTHO05D007473 4.8e-157 558.5 491 64.4
RcHm_v2.0_Chr4g0443331 Rosa chinensis HOM05D006041 ORTHO05D007473 1.1e-156 557.4 477 63.1
Nn4g24305 Nelumbo nucifera HOM05D006041 ORTHO05D007473 2.4e-156 556.2 478 64.6
THA.LOC104805081 Tarenaya hassleriana HOM05D006041 ORTHO05D007473 1.2e-155 553.9 491 64.0
CSS0021041 Camellia sinensis var. sinensis HOM05D006041 ORTHO05D007473 2.6e-155 552.7 486 63.4
CSS0021655 Camellia sinensis var. sinensis HOM05D006041 ORTHO05D007473 2.6e-155 552.7 486 63.4
Eucgr.G02114 Eucalyptus grandis HOM05D006041 ORTHO05D007473 5.9e-155 551.6 479 62.8
Gohir.A01G147900 Gossypium hirsutum HOM05D006041 ORTHO05D007473 1.3e-154 550.4 480 65.0
Prupe.1G331600 Prunus persica HOM05D006041 ORTHO05D007473 2.2e-154 549.7 480 63.1
vmacro00556 Vaccinium macrocarpon HOM05D006041 ORTHO05D007473 2.9e-154 549.3 479 64.1
CsaV3_5G028000 Cucumis sativus L. HOM05D006041 ORTHO05D007473 3.0e-151 539.3 477 62.1
TAR629G0174 Trochodendron aralioides HOM05D006041 ORTHO05D007473 4.0e-151 538.9 483 63.1
MD13G1029800 Malus domestica HOM05D006041 ORTHO05D007473 6.7e-151 538.1 488 61.5
Carub.0005s0060 Capsella rubella HOM05D006041 ORTHO05D007473 2.6e-150 536.2 478 63.0
Atru.chr11.510 Acer truncatum HOM05D006041 ORTHO05D007473 5.7e-150 535.0 477 62.1
Oeu016281.1 Olea europaea HOM05D006041 ORTHO05D007473 1.3e-149 533.9 476 61.6
Lj6A740T67 Lonicera japonica HOM05D006041 ORTHO05D007473 2.2e-149 533.1 482 61.2
MD16G1020600 Malus domestica HOM05D006041 ORTHO05D007473 3.7e-149 532.3 487 61.0
AUR62003915 Chenopodium quinoa HOM05D006041 ORTHO05D007473 1.1e-148 530.8 502 61.2
Thhalv10004151m.g Eutrema salsugineum HOM05D006041 ORTHO05D007473 1.1e-148 530.8 481 62.6
AL5G10750 Arabidopsis lyrata HOM05D006041 ORTHO05D007473 4.1e-148 528.9 476 62.0
MELO3C005281.2 Cucumis melo HOM05D006041 ORTHO05D007473 5.3e-148 528.5 477 61.0
SalBow2G0340 Salvia bowleyana HOM05D006041 ORTHO05D007473 1.6e-147 526.9 472 60.0
Cc11_g08020 Coffea canephora HOM05D006041 ORTHO05D007473 2.0e-147 526.6 481 62.2
AT2G01650 Arabidopsis thaliana HOM05D006041 ORTHO05D007473 3.5e-147 525.8 476 62.4
Lalb_Chr05g0222281 Lupinus albus HOM05D006041 ORTHO05D007473 3.5e-147 525.8 477 61.2
BcaC06g34139 Brassica carinata HOM05D006041 ORTHO05D007473 4.5e-147 525.4 483 62.9
BolC7t43765H Brassica oleracea HOM05D006041 ORTHO05D007473 1.0e-146 524.2 483 62.7
Nitab4.5_0009602g0010 Nicotiana tabacum HOM05D006041 ORTHO05D007473 2.9e-146 522.7 476 61.6
C07p32270 Brassica napus HOM05D006041 ORTHO05D007473 3.8e-146 522.3 479 62.4
DCAR_007323 Daucus carota HOM05D006041 ORTHO05D007473 1.5e-145 520.4 480 60.6
FvH4_4g33820 Fragaria vesca HOM05D006041 ORTHO05D007473 2.5e-145 519.6 476 62.0
Nitab4.5_0000238g0060 Nicotiana tabacum HOM05D006041 ORTHO05D007473 2.5e-145 519.6 476 61.6
VMungo0251G2799 Vigna mungo HOM05D006041 ORTHO05D007473 7.2e-145 518.1 478 59.8
EL10Ac6g15713 Beta vulgaris HOM05D006041 ORTHO05D007473 1.6e-144 516.9 516 57.6
Sp2g13100 Schrenkiella parvula HOM05D006041 ORTHO05D007473 1.6e-144 516.9 484 61.0
Gorai.002G173400 Gossypium raimondii HOM05D006041 ORTHO05D007473 2.7e-144 516.2 478 61.9
Gohir.D01G141100 Gossypium hirsutum HOM05D006041 ORTHO05D007473 6.1e-144 515.0 478 61.9
MBI19_g21093_MAGBIO Magnolia biondii HOM05D006041 ORTHO05D007473 6.1e-144 515.0 477 58.7
Aa31LG2G8250 Aethionema arabicum HOM05D006041 ORTHO05D007473 1.0e-143 514.2 473 61.5
BcaC06g31287 Brassica carinata HOM05D006041 ORTHO05D007473 1.0e-143 514.2 475 60.8
Solyc01g005430.3 Solanum lycopersicum HOM05D006041 ORTHO05D007473 1.4e-143 513.8 471 60.7
Glyma.08G042900 Glycine max HOM05D006041 ORTHO05D007473 1.8e-143 513.5 477 59.7
MSTRG.2140 Avicennia marina HOM05D006041 ORTHO05D007473 2.3e-143 513.1 473 60.9
Phvul.002G319700 Phaseolus vulgaris HOM05D006041 ORTHO05D007473 8.8e-143 511.1 479 59.5
FAN12G3784 Fragaria x ananassa HOM05D006041 ORTHO05D007473 2.6e-142 509.6 484 60.1
BraA06t27296Z Brassica rapa HOM05D006041 ORTHO05D007473 4.4e-142 508.8 477 60.8
Migut.E00465 Erythranthe guttata HOM05D006041 ORTHO05D007473 9.8e-142 507.7 472 59.1
FAN17G0347 Fragaria x ananassa HOM05D006041 ORTHO05D007473 1.3e-141 507.3 483 60.0
HanXRQChr08g0212441 Helianthus annuus HOM05D006041 ORTHO05D007473 2.2e-141 506.5 476 61.3
Sopen01g001440 Solanum pennellii HOM05D006041 ORTHO05D007473 1.1e-140 504.2 471 60.1
PGSC0003DMG400032118 Solanum tuberosum HOM05D006041 ORTHO05D007473 1.1e-140 504.2 476 59.9
Lj4g0006027 Lotus japonicus HOM05D006041 ORTHO05D007473 1.8e-140 503.4 476 58.4
FAN22G1094 Fragaria x ananassa HOM05D006041 ORTHO05D007473 2.4e-140 503.1 496 59.3
Medtr8g104930 Medicago truncatula HOM05D006041 ORTHO05D007473 2.4e-140 503.1 478 59.0
CARHR144220 Cardamine hirsuta HOM05D006041 ORTHO05D007473 3.1e-140 502.7 483 60.2
A06p44210 Brassica napus HOM05D006041 ORTHO05D007473 4.1e-140 502.3 473 60.5
Sc03g0001760 Simmondsia chinensis HOM05D006041 ORTHO05D007473 9.1e-140 501.1 509 58.0
TAR371G0590 Trochodendron aralioides HOM05D006041 ORTHO05D007473 5.9e-139 498.4 484 61.0
Glyma.05G235400 Glycine max HOM05D006041 ORTHO05D007473 7.7e-139 498.0 478 58.2
Potri.008G133700 Populus trichocarpa HOM05D006041 ORTHO05D007473 1.3e-138 497.3 412 69.4
Peaxi162Scf00655g00023 Petunia axillaris HOM05D006041 ORTHO05D007473 1.7e-138 496.9 455 61.8
SGA_v2.0_scaffold139G35400 Striga asiatica HOM05D006041 ORTHO05D007473 5.0e-138 495.4 479 56.4
Ah.03g145700 Amaranthus hybridus HOM05D006041 ORTHO05D007473 1.1e-137 494.2 492 57.9
Lsat_1_v5_gn_8_45641 Lactuca sativa HOM05D006041 ORTHO05D007473 2.1e-136 490.0 474 59.1
ClCG01G006460 Citrullus lanatus HOM05D006041 ORTHO05D007473 4.4e-134 482.3 478 57.3
arahy.Tifrunner.gnm1.ann1.IVEQ23 Arachis hypogaea HOM05D006041 ORTHO05D007473 7.5e-134 481.5 472 56.4
arahy.Tifrunner.gnm1.ann1.BAL5EB Arachis hypogaea HOM05D006041 ORTHO05D007473 2.8e-133 479.6 472 55.9
Ca_17289_v3 Cicer arietinum L. HOM05D006041 ORTHO05D007473 1.2e-131 474.2 478 55.6
CAN.G1130.10 Capsicum annuum HOM05D006041 ORTHO05D007473 2.7e-131 473.0 515 54.6
ECA233G3443 Erigeron canadensis HOM05D006041 ORTHO05D007473 2.7e-131 473.0 472 57.2
CiPaw.05G190300 Carya illinoinensis HOM05D006041 ORTHO05D007473 4.5e-131 472.2 398 67.1
Psat7g009240 Pisum sativum HOM05D006041 ORTHO05D007473 3.8e-130 469.2 476 56.5
unitig_27.g25310 Utricularia gibba HOM05D006041 ORTHO05D007473 1.9e-129 466.8 482 55.0
QL03p034952 Quercus lobata HOM05D006041 ORTHO05D007473 1.6e-128 463.8 433 63.0
CANSAT01G0691 Cannabis sativa HOM05D006041 ORTHO05D007473 3.6e-128 462.6 478 57.1
Dinv18641 Davidia involucrata HOM05D006041 ORTHO05D007473 3.6e-128 462.6 436 63.1
TPR.G32714 Trifolium pratense HOM05D006041 ORTHO05D007473 1.3e-125 454.1 479 55.3
Gohir.D02G141500 Gossypium hirsutum HOM05D006041 ORTHO05D007473 2.9e-125 453.0 410 63.9
PSO478G4621 Papaver somniferum HOM05D006041 ORTHO05D007473 3.2e-124 449.5 485 53.6
PSO017G0247 Papaver somniferum HOM05D006041 ORTHO05D007473 1.2e-123 447.6 485 53.4
ATR0753G012 Amborella trichopoda HOM05D006041 ORTHO05D007473 2.7e-123 446.4 489 53.6
Gohir.A03G117900 Gossypium hirsutum HOM05D006041 ORTHO05D007473 6.2e-120 435.3 408 63.2
Sed0015632 Sechium edule HOM05D006041 ORTHO05D007473 1.3e-117 427.6 496 50.6
AUR62038228 Chenopodium quinoa HOM05D006041 ORTHO05D007473 9.2e-116 421.4 482 53.9
CDE07G0862 Ceratophyllum demersum HOM05D006041 ORTHO05D007473 8.9e-111 404.8 478 50.6
Aqoxy3G00037 Aquilegia oxysepala HOM05D006041 ORTHO05D007473 1.4e-100 370.9 495 48.7
Sed0013468 Sechium edule HOM05D006041 ORTHO05D007473 6.2e-96 355.5 315 59.4
SGA_v2.0_scaffold151G36726 Striga asiatica HOM05D006041 ORTHO05D007473 2.9e-93 346.7 425 49.6
Zm00001eb099250 Zea mays HOM05D006041 ORTHO05D007473 9.6e-89 331.6 478 43.5
Zm00001eb312180 Zea mays HOM05D006041 ORTHO05D007473 1.7e-85 320.9 473 41.9
SEGI_21307 Sequoiadendron giganteum HOM05D006041 ORTHO05D007473 3.3e-81 306.6 390 48.2
GSVIVG01011678001 Vitis vinifera HOM05D006041 ORTHO05D007473 4.8e-80 302.8 187 79.7
Hma1.2p1_0089F.1_g045430 Hydrangea macrophylla HOM05D006041 ORTHO05D007473 8.1e-80 302.0 318 57.2
CDE06G1197 Ceratophyllum demersum HOM05D006041 ORTHO05D007473 3.1e-71 273.5 481 41.0
Actinidia34032 Actinidia chinensis HOM05D006041 ORTHO05D007473 3.4e-70 270.0 306 56.2
Oeu063578.1 Olea europaea HOM05D006041 ORTHO05D007473 7.1e-68 262.3 310 52.6
Aa31LG3G2990 Aethionema arabicum HOM05D006041 ORTHO05D007473 1.1e-65 255.0 228 61.8
SGA_v2.0_scaffold151G36757 Striga asiatica HOM05D006041 ORTHO05D007473 1.3e-64 251.5 228 61.0
HPP92_009644 Vanilla planifolia HOM05D006041 ORTHO05D007473 1.4e-63 248.1 245 53.9
CBR_g3474 Chara braunii HOM05D006041 ORTHO05D007473 1.1e-60 238.4 430 38.1
Os09g0401600 Oryza sativa ssp. japonica HOM05D006041 ORTHO05D007473 9.4e-60 235.3 222 56.8
Mapoly0081s0058 Marchantia polymorpha HOM05D006041 ORTHO05D007473 2.4e-47 194.1 329 37.1
Lalb_Chr16g0387681 Lupinus albus HOM05D006041 ORTHO05D007473 4.5e-46 189.9 314 43.0
SGA_v2.0_scaffold151G36758 Striga asiatica HOM05D006041 ORTHO05D007473 7.2e-44 182.6 238 45.8
Aa31sc215G20 Aethionema arabicum HOM05D006041 ORTHO05D007473 3.6e-43 180.3 151 62.9
arahy.Tifrunner.gnm1.ann1.I8TFGP Arachis hypogaea HOM05D006041 ORTHO05D007473 3.0e-34 150.6 155 49.0
QL10p059701 Quercus lobata HOM05D006041 ORTHO05D007473 1.2e-30 138.7 176 52.3
CAN.G3.6 Capsicum annuum HOM05D006041 ORTHO05D007473 5.5e-28 129.8 192 43.8
Psat7g181280 Pisum sativum HOM05D006041 ORTHO05D007473 3.6e-27 127.1 136 52.9
Actinidia25876 Actinidia chinensis HOM05D001822 ORTHO05D001744 5.9e-22 109.8 111 57.7
MCO04G546 Micromonas commoda HOM05D006041 ORTHO05D007473 2.3e-21 107.8 336 28.3
SMO276G0024 Selaginella moellendorffii HOM05D006041 ORTHO05D007473 1.6e-19 101.7 94 52.1
Actinidia34031 Actinidia chinensis HOM05D006041 ORTHO05D007473 1.7e-16 91.7 74 60.8
Aqoxy5G03556 Aquilegia oxysepala HOM05D004631 ORTHO05D005223 8.3e-08 62.8 115 34.8
CANSAT64G0886 Cannabis sativa HOM05D004631 ORTHO05D005223 1.9e-07 61.6 119 31.1
Thecc.04G027600 Theobroma cacao HOM05D004631 ORTHO05D005223 1.9e-07 61.6 154 29.2
CSS0005098 Camellia sinensis var. sinensis HOM05D004631 ORTHO05D005223 1.2e-06 58.9 116 31.9
CSS0019664 Camellia sinensis var. sinensis HOM05D004631 ORTHO05D005223 1.2e-06 58.9 116 31.9
Ciclev10016175m.g Citrus clementina HOM05D004631 ORTHO05D005223 1.2e-06 58.9 118 32.2
Ah.11g049900 Amaranthus hybridus HOM05D000470 ORTHO05D000348 2.7e-06 57.8 114 32.5
RhsimUnG0241300 Rhododendron simsii HOM05D004631 ORTHO05D005223 2.7e-06 57.8 117 30.8
MD09G1017300 Malus domestica HOM05D004631 ORTHO05D005223 3.5e-06 57.4 117 31.6
RcHm_v2.0_Chr2g0174181 Rosa chinensis HOM05D004631 ORTHO05D005223 3.5e-06 57.4 118 29.7
MD17G1018100 Malus domestica HOM05D004631 ORTHO05D005223 4.6e-06 57.0 112 32.1
FvH4_6g52650 Fragaria vesca HOM05D004631 ORTHO05D005223 6.0e-06 56.6 118 28.8
Actinidia35792 Actinidia chinensis HOM05D004631 ORTHO05D005223 7.8e-06 56.2 125 28.8
PGSC0003DMG400020270 Solanum tuberosum HOM05D004631 ORTHO05D005223 7.8e-06 56.2 118 31.4


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