Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G133050 Manihot esculenta HOM05D000248 ORTHO05D000146 8.5e-69 263.5 126 100.0
Duzib128G1684 Durio zibethinus HOM05D000248 ORTHO05D000146 6.9e-10 67.8 57 57.9
Gohir.A08G224500 Gossypium hirsutum HOM05D000248 ORTHO05D000146 1.7e-08 63.2 118 39.0
COL.COLO4_27415 Corchorus olitorius HOM05D000248 ORTHO05D000146 2.2e-08 62.8 112 40.2
Gohir.D08G244800 Gossypium hirsutum HOM05D000248 ORTHO05D000146 2.2e-08 62.8 118 39.0
Gorai.004G261300 Gossypium raimondii HOM05D000248 ORTHO05D000146 2.2e-08 62.8 118 39.0
CiPaw.07G076200 Carya illinoinensis HOM05D000248 ORTHO05D000146 4.9e-08 61.6 60 56.7
CiPaw.07G076300 Carya illinoinensis HOM05D000248 ORTHO05D000146 4.9e-08 61.6 60 56.7
Gohir.A05G390300 Gossypium hirsutum HOM05D000248 ORTHO05D000146 4.9e-08 61.6 59 57.6
Gohir.D04G026800 Gossypium hirsutum HOM05D000248 ORTHO05D000146 4.9e-08 61.6 59 57.6
Gorai.012G029500 Gossypium raimondii HOM05D000248 ORTHO05D000146 4.9e-08 61.6 59 57.6
AL5G11590 Arabidopsis lyrata HOM05D000248 ORTHO05D000146 8.4e-08 60.8 55 61.8
Gohir.A05G389600 Gossypium hirsutum HOM05D000248 ORTHO05D000146 1.1e-07 60.5 59 57.6
Gohir.D04G026900 Gossypium hirsutum HOM05D000248 ORTHO05D000146 1.1e-07 60.5 59 57.6
Gorai.012G029600 Gossypium raimondii HOM05D000248 ORTHO05D000146 1.1e-07 60.5 59 57.6
Ciclev10003574m.g Citrus clementina HOM05D000248 ORTHO05D000146 1.4e-07 60.1 58 62.1
Gohir.A04G082300 Gossypium hirsutum HOM05D000248 ORTHO05D000146 1.9e-07 59.7 59 55.9
CAN.G504.33 Capsicum annuum HOM05D000248 ORTHO05D000146 2.4e-07 59.3 63 50.8
Gohir.A05G389800 Gossypium hirsutum HOM05D000248 ORTHO05D000146 4.2e-07 58.5 59 55.9
CARHR144920 Cardamine hirsuta HOM05D000248 ORTHO05D000146 5.5e-07 58.2 55 60.0
Gohir.A05G389700 Gossypium hirsutum HOM05D000248 ORTHO05D000146 5.5e-07 58.2 55 60.0
AT2G02250 Arabidopsis thaliana HOM05D000248 ORTHO05D000146 7.1e-07 57.8 76 43.4
Cpa.g.sc3.350 Carica papaya HOM05D000248 ORTHO05D000146 7.1e-07 57.8 75 44.0
Phvul.010G078180 Phaseolus vulgaris HOM05D000248 ORTHO05D000146 7.1e-07 57.8 60 53.3
BcaC03g17126 Brassica carinata HOM05D000248 ORTHO05D000146 9.3e-07 57.4 56 60.7
C02p50360 Brassica napus HOM05D000248 ORTHO05D000146 9.3e-07 57.4 56 60.7
BolC2t11117H Brassica oleracea HOM05D000248 ORTHO05D000146 9.3e-07 57.4 56 60.7
VMungo0540G2455 Vigna mungo HOM05D000248 ORTHO05D000146 1.2e-06 57.0 61 50.8
AT2G02240 Arabidopsis thaliana HOM05D000248 ORTHO05D000146 1.6e-06 56.6 55 56.4
Duzib177G0899 Durio zibethinus HOM05D000248 ORTHO05D000146 1.6e-06 56.6 58 53.4
Eucgr.B02074 Eucalyptus grandis HOM05D000248 ORTHO05D000146 1.6e-06 56.6 62 50.0
THA.LOC104805126 Tarenaya hassleriana HOM05D000248 ORTHO05D000146 1.6e-06 56.6 58 55.2
CAN.G504.76 Capsicum annuum HOM05D000248 ORTHO05D000146 2.1e-06 56.2 63 47.6
CsaV3_2G010420 Cucumis sativus L. HOM05D000248 ORTHO05D000146 2.1e-06 56.2 120 37.5
Phvul.006G108500 Phaseolus vulgaris HOM05D000248 ORTHO05D000146 2.1e-06 56.2 61 50.8
AT2G02360 Arabidopsis thaliana HOM05D000248 ORTHO05D000146 2.7e-06 55.8 55 56.4
Cfa006659 Carpinus fangiana HOM05D000248 ORTHO05D000146 2.7e-06 55.8 58 53.4
FAN14G0352 Fragaria x ananassa HOM05D000248 ORTHO05D000146 2.7e-06 55.8 61 45.9
QL09p029277 Quercus lobata HOM05D000248 ORTHO05D000146 2.7e-06 55.8 61 52.5
VMungo0720G1767 Vigna mungo HOM05D000248 ORTHO05D000146 2.7e-06 55.8 61 52.5
CAN.G504.68 Capsicum annuum HOM05D000248 ORTHO05D000146 3.5e-06 55.5 58 51.7
CAN.G504.72 Capsicum annuum HOM05D000248 ORTHO05D000146 3.5e-06 55.5 63 47.6
FvH4_6g01030 Fragaria vesca HOM05D000248 ORTHO05D000146 3.5e-06 55.5 61 45.9
Glyma.20G220100 Glycine max HOM05D000248 ORTHO05D000146 3.5e-06 55.5 61 50.8
Solyc10g051160.2 Solanum lycopersicum HOM05D000248 ORTHO05D000146 3.5e-06 55.5 62 50.0
AL5G11570 Arabidopsis lyrata HOM05D000248 ORTHO05D000146 4.6e-06 55.1 54 57.4
AL5G11580 Arabidopsis lyrata HOM05D000248 ORTHO05D000146 4.6e-06 55.1 55 54.5
AL8G13800 Arabidopsis lyrata HOM05D000248 ORTHO05D000146 4.6e-06 55.1 57 50.9
arahy.Tifrunner.gnm1.ann1.IM6RX7 Arachis hypogaea HOM05D000248 ORTHO05D000146 4.6e-06 55.1 60 50.0
arahy.Tifrunner.gnm1.ann1.N1E5J3 Arachis hypogaea HOM05D000248 ORTHO05D000146 4.6e-06 55.1 60 50.0
BcaC06g31242 Brassica carinata HOM05D000248 ORTHO05D000146 4.6e-06 55.1 59 52.5
Sp2g13610 Schrenkiella parvula HOM05D000248 ORTHO05D000146 4.6e-06 55.1 60 56.7
TWI23G0538 Tripterygium wilfordii HOM05D000248 ORTHO05D000146 4.6e-06 55.1 64 46.9
MSTRG.9824 Avicennia marina HOM05D000248 ORTHO05D000146 6.0e-06 54.7 57 52.6
BcaC06g31241 Brassica carinata HOM05D000248 ORTHO05D000146 6.0e-06 54.7 59 50.8
Cfa006294 Carpinus fangiana HOM05D000248 ORTHO05D000146 6.0e-06 54.7 74 47.3
QL09p029257 Quercus lobata HOM05D000248 ORTHO05D000146 6.0e-06 54.7 61 52.5
TAR365G0279 Trochodendron aralioides HOM05D000248 ORTHO05D000146 6.0e-06 54.7 86 37.2
TAR636G3635 Trochodendron aralioides HOM05D000248 ORTHO05D000146 6.0e-06 54.7 60 51.7
C07p33130 Brassica napus HOM05D000248 ORTHO05D000146 7.9e-06 54.3 58 53.4
Haze_04507 Corylus avellana HOM05D000248 ORTHO05D000146 7.9e-06 54.3 61 52.5


User provided reference genes

Program Settings