Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G123932 Manihot esculenta HOM05D008821 ORTHO05D010464 1.8e-78 295.8 142 100.0
Lj5g0007792 Lotus japonicus HOM05D008821 ORTHO05D010464 4.0e-22 108.6 130 46.2
CiPaw.09G121300 Carya illinoinensis HOM05D008821 ORTHO05D010464 8.8e-22 107.5 113 52.2
Lj4g0018254 Lotus japonicus HOM05D008821 ORTHO05D010464 2.6e-21 105.9 130 45.4
Glyma.08G098600 Glycine max HOM05D008821 ORTHO05D010464 3.7e-20 102.1 134 46.3
Glyma.05G142600 Glycine max HOM05D008821 ORTHO05D010464 5.4e-19 98.2 133 45.1
Gohir.D06G143700 Gossypium hirsutum HOM05D008821 ORTHO05D010464 1.2e-18 97.1 150 41.3
Gorai.010G167500 Gossypium raimondii HOM05D008821 ORTHO05D010464 1.6e-18 96.7 150 41.3
Thecc.06G147000 Theobroma cacao HOM05D008821 ORTHO05D010464 2.0e-18 96.3 137 43.8
Gohir.A06G139000 Gossypium hirsutum HOM05D008821 ORTHO05D010464 4.5e-18 95.1 150 40.7
Oeu007936.1 Olea europaea HOM05D008821 ORTHO05D010464 5.9e-18 94.7 114 47.4
Dinv32224 Davidia involucrata HOM05D000116 ORTHO05D000133 1.3e-17 93.6 116 46.6
TAR460G0006 Trochodendron aralioides HOM05D008821 ORTHO05D010464 1.7e-17 93.2 130 47.7
Oeu007934.1 Olea europaea HOM05D008821 ORTHO05D010464 2.3e-17 92.8 114 46.5
CSS0030437 Camellia sinensis var. sinensis HOM05D008821 ORTHO05D010464 5.0e-17 91.7 113 46.9
Nn4g26609 Nelumbo nucifera HOM05D008821 ORTHO05D010464 1.1e-16 90.5 135 43.0
Phvul.002G180600 Phaseolus vulgaris HOM05D008821 ORTHO05D010464 1.5e-16 90.1 137 43.8
Lalb_Chr12g0196061 Lupinus albus HOM05D008821 ORTHO05D010464 3.3e-16 89.0 83 55.4
Atru.chr10.1160 Acer truncatum HOM05D008821 ORTHO05D010464 1.0e-14 84.0 123 39.0
Prupe.4G083800 Prunus persica HOM05D008821 ORTHO05D010464 1.0e-14 84.0 149 41.6
PSO541G6549 Papaver somniferum HOM05D008821 ORTHO05D010464 1.4e-14 83.6 107 44.9
CsaV3_6G051900 Cucumis sativus L. HOM05D000116 ORTHO05D010464 1.8e-14 83.2 105 46.7
MELO3C007119.2 Cucumis melo HOM05D008821 ORTHO05D010464 3.0e-14 82.4 106 46.2
ClCG01G024780 Citrullus lanatus HOM05D008821 ORTHO05D010464 5.2e-14 81.6 106 46.2
RcHm_v2.0_Chr5g0014511 Rosa chinensis HOM05D008821 ORTHO05D010464 6.8e-14 81.3 148 39.9
TPR.G9571 Trifolium pratense HOM05D008821 ORTHO05D010464 3.4e-13 79.0 107 45.8
FAN21G0539 Fragaria x ananassa HOM05D008821 ORTHO05D010464 4.4e-13 78.6 140 42.1
arahy.Tifrunner.gnm1.ann1.ZX7BQ2 Arachis hypogaea HOM05D000116 ORTHO05D010464 5.7e-13 78.2 93 50.5
FvH4_3g05210 Fragaria vesca HOM05D008821 ORTHO05D010464 5.7e-13 78.2 141 42.6
MBI18_g11239_MAGBIO Magnolia biondii HOM05D008821 ORTHO05D010464 5.7e-13 78.2 96 47.9
arahy.Tifrunner.gnm1.ann1.SDZ0GZ Arachis hypogaea HOM05D008821 ORTHO05D010464 1.3e-12 77.0 93 49.5
Medtr5g077560 Medicago truncatula HOM05D008821 ORTHO05D010464 6.3e-12 74.7 106 42.5
FAN16G1747 Fragaria x ananassa HOM05D008821 ORTHO05D010464 8.3e-12 74.3 140 41.4
FAN16G2928 Fragaria x ananassa HOM05D008821 ORTHO05D010464 8.3e-12 74.3 140 41.4
Sed0011418 Sechium edule HOM05D008821 ORTHO05D010464 4.1e-11 72.0 113 42.5
Aqoxy1G01677 Aquilegia oxysepala HOM05D008821 ORTHO05D010464 7.0e-11 71.2 119 41.2
Psat7g081560 Pisum sativum HOM05D008821 ORTHO05D010464 2.7e-10 69.3 105 41.9
Sc24g0001660 Simmondsia chinensis HOM05D008821 ORTHO05D010464 5.9e-10 68.2 119 37.0
Haze_05636 Corylus avellana HOM05D008821 ORTHO05D010464 1.1e-08 63.9 77 46.8
AT4G18395 Arabidopsis thaliana HOM05D010864 ORTHO05D010464 2.5e-08 62.8 108 38.9
Cfa000919 Carpinus fangiana HOM05D008821 ORTHO05D010464 1.6e-07 60.1 74 45.9
AL7G35960 Arabidopsis lyrata HOM05D010864 ORTHO05D010464 2.1e-07 59.7 108 35.2
CARHR225210 Cardamine hirsuta HOM05D010864 ORTHO05D010464 2.8e-07 59.3 101 39.6
Carub.0007s2287 Capsella rubella HOM05D010864 ORTHO05D010464 1.0e-06 57.4 97 37.1
A08p13730 Brassica napus HOM05D010864 ORTHO05D010464 1.4e-06 57.0 93 39.8
BraA08t33355Z Brassica rapa HOM05D010864 ORTHO05D010464 1.4e-06 57.0 93 39.8
Sp7g15640 Schrenkiella parvula HOM05D010864 ORTHO05D010464 1.4e-06 57.0 97 39.2
Thhalv10027014m.g Eutrema salsugineum HOM05D010864 ORTHO05D010464 1.8e-06 56.6 108 37.0
BcaC01g00536 Brassica carinata HOM05D010864 ORTHO05D010464 2.3e-06 56.2 93 39.8
C03p81130 Brassica napus HOM05D010864 ORTHO05D010464 2.3e-06 56.2 93 39.8
BolC3t20381H Brassica oleracea HOM05D010864 ORTHO05D010464 2.3e-06 56.2 93 39.8
SGA_v2.0_scaffold40G15657 Striga asiatica HOM05D000624 ORTHO05D000495 3.0e-06 55.8 116 37.9


User provided reference genes

Program Settings