Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 1.7e-207 725.7 361 100.0
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 6.0e-176 620.9 359 84.1
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 5.7e-174 614.4 359 84.7
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 8.2e-173 610.5 358 83.2
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 2.6e-171 605.5 360 81.1
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 6.5e-170 600.9 359 80.8
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 3.2e-169 598.6 359 81.1
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 4.2e-169 598.2 359 80.8
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 7.2e-169 597.4 361 81.4
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 9.3e-169 597.0 359 81.1
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 1.2e-168 596.7 359 79.7
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 1.6e-168 596.3 348 83.9
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 1.6e-168 596.3 354 82.2
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 1.6e-168 596.3 359 79.9
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 3.9e-167 591.7 356 80.3
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 3.9e-167 591.7 356 80.6
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 6.7e-167 590.9 382 77.0
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 8.7e-167 590.5 359 80.2
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.1e-166 590.1 356 80.1
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 1.1e-166 590.1 357 80.7
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 1.1e-166 590.1 359 80.8
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 1.9e-166 589.3 397 75.8
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 2.5e-166 589.0 358 81.0
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 1.3e-165 586.6 356 79.8
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 1.6e-165 586.3 357 79.8
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 2.2e-165 585.9 359 80.2
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 2.8e-165 585.5 358 79.9
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 8.2e-165 583.9 359 79.1
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 2.4e-164 582.4 359 78.8
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 5.3e-164 581.3 355 80.0
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 6.9e-164 580.9 358 77.9
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 1.2e-163 580.1 359 79.1
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 1.2e-163 580.1 357 79.3
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 1.2e-163 580.1 359 78.3
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.3e-162 576.6 359 78.3
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 8.5e-162 573.9 359 77.4
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 9.4e-161 570.5 358 76.8
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 9.4e-161 570.5 360 76.9
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 2.1e-160 569.3 361 75.9
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 6.1e-160 567.8 354 77.7
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 1.0e-159 567.0 361 75.9
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 2.3e-159 565.8 359 76.6
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 2.3e-159 565.8 358 77.4
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 6.7e-159 564.3 360 74.7
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 8.8e-159 563.9 355 76.3
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 8.8e-159 563.9 353 77.1
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 8.8e-159 563.9 360 76.1
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 1.5e-158 563.1 358 76.5
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 7.4e-158 560.8 360 75.8
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 1.3e-157 560.1 355 75.8
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 1.7e-157 559.7 353 77.3
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 5.3e-156 554.7 386 71.8
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 6.9e-156 554.3 360 74.7
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 1.5e-155 553.1 369 73.2
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 4.5e-155 551.6 358 74.9
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 8.5e-154 547.4 343 77.6
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 8.5e-154 547.4 371 72.5
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 5.7e-150 534.6 348 73.9
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 7.4e-150 534.3 361 74.5
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 2.4e-148 529.3 358 72.9
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 2.6e-147 525.8 310 83.5
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 7.7e-147 524.2 352 71.6
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 5.0e-146 521.5 353 74.5
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 4.2e-145 518.5 379 71.0
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 7.2e-145 517.7 345 71.6
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 1.6e-144 516.5 351 73.2
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 4.0e-143 511.9 357 70.9
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 2.6e-142 509.2 343 70.6
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 9.1e-140 500.7 345 69.3
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 1.5e-134 483.4 392 64.8
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 6.3e-133 478.0 341 67.4
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 6.3e-133 478.0 341 67.4
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 1.2e-131 473.8 300 79.0
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 2.3e-127 459.5 359 65.5
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 4.0e-127 458.8 356 66.9
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 3.2e-116 422.5 353 60.6
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 2.4e-108 396.4 226 85.4
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 7.0e-108 394.8 341 58.7
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.5e-105 386.3 225 82.7
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 2.8e-104 382.9 226 82.7
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 3.0e-98 362.8 267 71.5
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 2.2e-93 346.7 273 63.7
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 2.3e-90 336.7 236 69.5
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 4.9e-85 318.9 202 78.2
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 1.1e-81 307.8 174 83.9
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 1.0e-74 284.6 344 43.6
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 6.5e-61 238.8 195 65.1
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 9.3e-60 235.0 145 78.6
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 7.2e-52 208.8 139 71.9
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 4.6e-51 206.1 135 72.6
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 1.8e-10 71.2 77 53.2


User provided reference genes

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