Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G088900 Manihot esculenta HOM05D007784 ORTHO05D008654 2.7e-113 412.1 232 100.0
Manes.03G106700 Manihot esculenta HOM05D007784 ORTHO05D008654 1.6e-65 253.4 241 67.6
Potri.001G398000 Populus trichocarpa HOM05D007784 ORTHO05D008654 1.9e-53 213.4 241 58.1
Potri.011G116600 Populus trichocarpa HOM05D007784 ORTHO05D008654 5.4e-53 211.8 242 60.7
Sabra11G0102100 Salix brachista HOM05D007784 ORTHO05D008654 1.9e-50 203.4 238 58.0
Sabra16G0260800 Salix brachista HOM05D007784 ORTHO05D008654 1.3e-49 200.7 242 56.6
Ciclev10010505m.g Citrus clementina HOM05D007784 ORTHO05D008654 4.2e-45 185.7 236 55.5
Thecc.07G095100 Theobroma cacao HOM05D007784 ORTHO05D008654 1.2e-44 184.1 239 52.3
Gohir.D01G048300 Gossypium hirsutum HOM05D007784 ORTHO05D008654 3.5e-44 182.6 232 53.4
Gorai.002G068100 Gossypium raimondii HOM05D007784 ORTHO05D008654 3.5e-44 182.6 232 53.4
Gohir.A01G061700 Gossypium hirsutum HOM05D007784 ORTHO05D008654 6.0e-44 181.8 231 53.2
Duzib268G0159 Durio zibethinus HOM05D007784 ORTHO05D008654 3.7e-41 172.6 238 50.4
Duzib213G0720 Durio zibethinus HOM05D007784 ORTHO05D008654 1.4e-40 170.6 229 52.4
Cfa020564 Carpinus fangiana HOM05D007784 ORTHO05D008654 6.9e-40 168.3 240 56.7
Cpa.g.c36086 Carica papaya HOM05D007784 ORTHO05D008654 2.0e-39 166.8 245 53.9
Gohir.D13G151926 Gossypium hirsutum HOM05D007784 ORTHO05D008654 4.9e-38 162.2 227 52.9
COL.COLO4_36703 Corchorus olitorius HOM05D007784 ORTHO05D008654 5.5e-37 158.7 240 48.3
Atru.chr2.2433 Acer truncatum HOM05D007784 ORTHO05D008654 2.7e-36 156.4 271 49.8
QL08p022546 Quercus lobata HOM05D007784 ORTHO05D008654 4.6e-36 155.6 236 48.7
CiPaw.11G171500 Carya illinoinensis HOM05D007784 ORTHO05D008654 4.3e-34 149.1 251 50.6
Prupe.4G177000 Prunus persica HOM05D007784 ORTHO05D008654 4.9e-30 135.6 242 50.8
MD03G1230800 Malus domestica HOM05D007784 ORTHO05D008654 1.1e-29 134.4 235 49.8
FvH4_3g19630 Fragaria vesca HOM05D007784 ORTHO05D008654 1.2e-28 131.0 253 46.6
FAN11G2265 Fragaria x ananassa HOM05D007784 ORTHO05D008654 1.2e-28 131.0 253 46.6
FAN21G3158 Fragaria x ananassa HOM05D007784 ORTHO05D008654 6.0e-28 128.6 253 46.6
PGR031G1623 Punica granatum HOM05D007784 ORTHO05D008654 3.9e-27 125.9 220 45.5
RcHm_v2.0_Chr5g0032821 Rosa chinensis HOM05D007784 ORTHO05D008654 3.9e-27 125.9 252 42.1
ClCG11G017920 Citrullus lanatus HOM05D007784 ORTHO05D008654 8.7e-27 124.8 248 39.5
CiPaw.12G119800 Carya illinoinensis HOM05D007784 ORTHO05D008654 1.1e-26 124.4 232 48.7
FAN25G3654 Fragaria x ananassa HOM05D007784 ORTHO05D008654 1.3e-25 120.9 253 45.5
Lalb_Chr03g0030731 Lupinus albus HOM05D007784 ORTHO05D008654 1.6e-25 120.6 231 45.9
Gorai.013G169700 Gossypium raimondii HOM05D007784 ORTHO05D008654 2.2e-25 120.2 191 51.3
Duzib170G0657 Durio zibethinus HOM05D007784 ORTHO05D008654 6.3e-25 118.6 221 48.0
Psat4g131560 Pisum sativum HOM05D007784 ORTHO05D008654 5.3e-24 115.5 210 39.5
MELO3C025600.2 Cucumis melo HOM05D007784 ORTHO05D008654 2.6e-23 113.2 252 44.4
Aqoxy5G00008 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 7.6e-23 111.7 213 46.5
Aqoxy1G02344 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 1.3e-22 110.9 213 46.0
CSS0002410 Camellia sinensis var. sinensis HOM05D007784 ORTHO05D008654 3.8e-22 109.4 236 43.2
FAN16G2579 Fragaria x ananassa HOM05D007784 ORTHO05D008654 6.5e-22 108.6 231 41.6
CANSAT56G4083 Cannabis sativa HOM05D007784 ORTHO05D008654 1.9e-21 107.1 254 44.5
Phvul.011G165000 Phaseolus vulgaris HOM05D007784 ORTHO05D008654 4.2e-21 105.9 223 41.7
CsaV3_4G033550 Cucumis sativus L. HOM05D007784 ORTHO05D008654 5.5e-21 105.5 246 43.9
TWI38G0880 Tripterygium wilfordii HOM05D007784 ORTHO05D008654 7.9e-20 101.7 229 44.5
Actinidia09697 Actinidia chinensis HOM05D007784 ORTHO05D008654 1.4e-19 100.9 207 45.9
Glyma.12G163035 Glycine max HOM05D007784 ORTHO05D008654 3.0e-19 99.8 237 36.7
Haze_09448 Corylus avellana HOM05D007784 ORTHO05D008654 3.9e-19 99.4 139 66.2
Hma1.2p1_0387F.1_g141980 Hydrangea macrophylla HOM05D007784 ORTHO05D008654 5.1e-19 99.0 235 31.9
Rhsim06G0201400 Rhododendron simsii HOM05D007784 ORTHO05D008654 1.9e-18 97.1 254 41.3
Lalb_Chr01g0006591 Lupinus albus HOM05D007784 ORTHO05D008654 2.5e-18 96.7 233 38.2
VMungo1127G1039 Vigna mungo HOM05D007784 ORTHO05D008654 1.7e-17 94.0 225 36.9
Glyma.06G238300 Glycine max HOM05D007784 ORTHO05D008654 3.7e-17 92.8 228 36.8
Cc05_g11830 Coffea canephora HOM05D007784 ORTHO05D008654 8.2e-17 91.7 235 39.6
Oeu051079.1 Olea europaea HOM05D007784 ORTHO05D008654 8.2e-17 91.7 230 41.3
TAR627G0175 Trochodendron aralioides HOM05D007784 ORTHO05D008654 8.2e-17 91.7 204 44.1
THA.LOC104810461 Tarenaya hassleriana HOM05D009851 ORTHO05D008654 1.1e-16 91.3 247 30.8
Dinv14932 Davidia involucrata HOM05D007784 ORTHO05D008654 1.4e-16 90.9 237 32.1
CAN.G162.41 Capsicum annuum HOM05D007784 ORTHO05D008654 6.9e-16 88.6 211 33.6
TAR627G0444 Trochodendron aralioides HOM05D007784 ORTHO05D008654 9.1e-16 88.2 206 42.7
Lj3g0015921 Lotus japonicus HOM05D007784 ORTHO05D008654 2.0e-15 87.0 228 41.2
MSTRG.15239 Avicennia marina HOM05D007784 ORTHO05D008654 5.9e-15 85.5 205 42.0
Nn1g06458 Nelumbo nucifera HOM05D007784 ORTHO05D008654 1.0e-14 84.7 226 37.2
Medtr0598s0020 Medicago truncatula HOM05D007784 ORTHO05D008654 1.7e-14 84.0 168 48.2
EL10Ac4g08222 Beta vulgaris HOM05D007784 ORTHO05D008654 2.2e-14 83.6 243 42.0
AL3G27640 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 2.9e-14 83.2 239 34.7
Carub.0001s4232 Capsella rubella HOM05D009851 ORTHO05D008654 6.5e-14 82.0 266 32.0
Carub.0003s1490 Capsella rubella HOM05D009851 ORTHO05D008654 6.5e-14 82.0 228 42.1
PGSC0003DMG400012442 Solanum tuberosum HOM05D007784 ORTHO05D008654 6.5e-14 82.0 247 40.1
Nn1g04167 Nelumbo nucifera HOM05D007784 ORTHO05D008654 1.4e-13 80.9 244 42.6
Ca_23050_v3 Cicer arietinum L. HOM05D007784 ORTHO05D008654 1.9e-13 80.5 204 35.8
Solyc07g062960.1 Solanum lycopersicum HOM05D007784 ORTHO05D008654 1.9e-13 80.5 222 41.9
CARHR090230 Cardamine hirsuta HOM05D009851 ORTHO05D008654 2.5e-13 80.1 230 33.9
Sp3g13450 Schrenkiella parvula HOM05D009851 ORTHO05D008654 3.2e-13 79.7 222 42.8
AL1G61530 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 4.2e-13 79.3 285 28.8
Sopen07g031150 Solanum pennellii HOM05D007784 ORTHO05D008654 5.5e-13 79.0 217 42.4
TPR.G18874 Trifolium pratense HOM05D007784 ORTHO05D008654 7.2e-13 78.6 169 37.9
AT1G53163 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 9.4e-13 78.2 257 28.8
CARHR043380 Cardamine hirsuta HOM05D009851 ORTHO05D008654 9.4e-13 78.2 256 31.2
A05p34230 Brassica napus HOM05D009851 ORTHO05D008654 1.2e-12 77.8 220 35.9
BraA05t22243Z Brassica rapa HOM05D009851 ORTHO05D008654 1.2e-12 77.8 198 37.9
PGR083G0236 Punica granatum HOM05D007784 ORTHO05D008654 1.2e-12 77.8 210 32.9
BraA06t23343Z Brassica rapa HOM05D009851 ORTHO05D008654 1.6e-12 77.4 243 30.5
AUR62036175 Chenopodium quinoa HOM05D007784 ORTHO05D008654 2.1e-12 77.0 246 30.5
A06p01160 Brassica napus HOM05D009851 ORTHO05D008654 2.7e-12 76.6 244 29.5
BcaC08g43508 Brassica carinata HOM05D009851 ORTHO05D008654 3.6e-12 76.3 243 30.5
C06p08940 Brassica napus HOM05D009851 ORTHO05D008654 3.6e-12 76.3 243 30.5
BolC6t35972H Brassica oleracea HOM05D009851 ORTHO05D008654 3.6e-12 76.3 243 30.5
BcaB06g29549 Brassica carinata HOM05D009851 ORTHO05D008654 6.1e-12 75.5 208 40.9
BcaB06g29548 Brassica carinata HOM05D009851 ORTHO05D008654 7.9e-12 75.1 208 38.5
C05p51990 Brassica napus HOM05D009851 ORTHO05D008654 1.0e-11 74.7 219 33.8
BolC5t33884H Brassica oleracea HOM05D009851 ORTHO05D008654 5.1e-11 72.4 219 32.9
AUR62019455 Chenopodium quinoa HOM05D007784 ORTHO05D008654 5.1e-11 72.4 274 34.3
BcaB07g33353 Brassica carinata HOM05D009851 ORTHO05D008654 6.7e-11 72.0 247 28.3
DCAR_017127 Daucus carota HOM05D007784 ORTHO05D008654 1.5e-10 70.9 198 42.4
AT3G15250 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 2.0e-10 70.5 244 33.6
Eucgr.F03301 Eucalyptus grandis HOM05D007784 ORTHO05D008654 4.4e-10 69.3 136 37.5
Sp1g39710 Schrenkiella parvula HOM05D009851 ORTHO05D008654 4.4e-10 69.3 259 27.4
Migut.M00785 Erythranthe guttata HOM05D007784 ORTHO05D008654 5.7e-10 68.9 217 41.9
Thhalv10012165m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 5.7e-10 68.9 277 27.1
Thhalv10021913m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 5.7e-10 68.9 223 36.3
PSO541G4378 Papaver somniferum HOM05D007784 ORTHO05D008654 1.3e-09 67.8 225 40.0
Peaxi162Scf00069g01710 Petunia axillaris HOM05D007784 ORTHO05D008654 2.2e-09 67.0 206 33.0
Sc16g0007130 Simmondsia chinensis HOM05D007784 ORTHO05D008654 4.8e-09 65.9 220 27.7
BcaB03g11679 Brassica carinata HOM05D009851 ORTHO05D008654 4.1e-08 62.8 87 46.0
ATR0150G022 Amborella trichopoda HOM05D007784 ORTHO05D008654 2.6e-07 60.1 182 41.8
SGA_v2.0_scaffold73G24239 Striga asiatica HOM05D007784 ORTHO05D008654 7.7e-07 58.5 202 38.6
Ah.06g184500 Amaranthus hybridus HOM05D007784 ORTHO05D008654 1.3e-06 57.8 247 27.1
ECA234G3343 Erigeron canadensis HOM05D007784 ORTHO05D008654 2.2e-06 57.0 214 33.6
Sed0023140 Sechium edule HOM05D007784 ORTHO05D008654 8.5e-06 55.1 57 54.4


User provided reference genes

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