Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 7.1e-240 833.6 435 100.0
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 1.6e-93 347.4 419 53.5
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 7.7e-93 345.1 418 52.2
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 5.2e-89 332.4 428 50.7
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 2.7e-85 320.1 456 47.8
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 4.2e-83 312.8 486 47.3
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 5.5e-83 312.4 452 46.9
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 1.7e-79 300.8 491 45.6
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 5.5e-75 285.8 462 45.7
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 1.2e-74 284.6 459 44.7
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 1.6e-74 284.3 432 45.4
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 8.0e-74 282.0 450 46.0
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 1.2e-72 278.1 458 44.8
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 5.7e-72 275.8 427 46.1
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.1e-70 271.6 437 45.1
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 2.0e-69 267.3 450 42.4
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 2.7e-69 266.9 476 41.4
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 1.7e-68 264.2 428 44.9
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.1e-67 261.5 439 42.8
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 5.6e-67 259.2 473 40.0
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 7.3e-67 258.8 443 42.7
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 1.2e-66 258.1 463 41.7
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 6.1e-66 255.8 439 42.4
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.8e-65 254.2 437 42.1
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 8.3e-63 245.4 431 42.7
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 1.9e-62 244.2 447 42.1
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 2.4e-62 243.8 522 39.5
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 7.0e-62 242.3 323 49.5
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 9.2e-62 241.9 437 41.0
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 1.6e-61 241.1 366 46.7
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 1.0e-60 238.4 429 41.7
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 1.6e-58 231.1 444 41.0
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 4.4e-56 223.0 457 42.0
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 4.4e-56 223.0 458 39.5
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 4.4e-56 223.0 429 42.9
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 4.1e-54 216.5 441 40.4
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 5.4e-54 216.1 452 41.6
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 2.0e-48 197.6 413 39.2
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 7.6e-48 195.7 418 39.0
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 9.9e-48 195.3 405 39.3
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 3.6e-42 176.8 364 40.4
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 1.4e-41 174.9 480 33.5
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 1.5e-40 171.4 393 38.7
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 1.1e-38 165.2 414 36.5
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 3.3e-35 153.7 243 42.4
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 3.3e-35 153.7 244 43.0
Hma1.2p1_1176F.1_g264250 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 9.6e-35 152.1 340 38.5
Hma1.2p1_1176F.1_g264255 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 9.6e-35 152.1 340 38.5
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 1.4e-33 148.3 418 36.1
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 2.4e-33 147.5 434 33.2
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 3.1e-33 147.1 382 35.3
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 9.0e-33 145.6 388 35.8
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 1.5e-32 144.8 432 35.2
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 2.6e-32 144.1 342 34.8
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 3.2e-30 137.1 503 32.4
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 1.2e-29 135.2 436 33.9
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 1.2e-29 135.2 484 30.2
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 1.6e-29 134.8 426 34.0
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 6.0e-29 132.9 502 31.7
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 6.0e-29 132.9 384 33.3
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 1.9e-27 127.9 237 42.6
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 1.9e-27 127.9 429 34.7
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 7.3e-27 125.9 269 33.8
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 7.3e-27 125.9 300 34.3
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 1.3e-26 125.2 265 37.4
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 9.0e-25 119.0 500 31.2
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 2.6e-24 117.5 478 28.5
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 1.3e-23 115.2 256 37.5
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 3.8e-23 113.6 464 31.2
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 1.6e-21 108.2 492 27.8
FvH4_3g21030 Fragaria vesca HOM05D007962 ORTHO05D009990 3.5e-21 107.1 314 34.1
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 6.0e-21 106.3 433 30.9
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 1.6e-18 98.2 489 27.8
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 6.2e-18 96.3 261 32.2
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 1.2e-16 92.0 363 29.2
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 1.9e-14 84.7 451 28.8
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 1.2e-13 82.0 105 46.7
Sed0012704 Sechium edule HOM05D007962 ORTHO05D009990 3.9e-12 77.0 415 29.2
SEGI_13433 Sequoiadendron giganteum HOM05D007962 ORTHO05D009990 4.1e-09 67.0 134 40.3
AagrBONN_evm.TU.Sc2ySwM_228.932 Anthoceros agrestis HOM05D020562 ORTHO05D009990 3.4e-08 63.9 46 60.9


User provided reference genes

Program Settings