Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G081401 Manihot esculenta HOM05D008268 ORTHO05D010144 6.8e-193 677.2 344 100.0
Sabra16G0271800 Salix brachista HOM05D019858 ORTHO05D010144 1.9e-49 200.7 368 44.8
Sabra16G0276800 Salix brachista HOM05D019858 ORTHO05D010144 1.9e-49 200.7 368 44.8
Thecc.07G068700 Theobroma cacao HOM05D008268 ORTHO05D010144 7.3e-46 188.7 358 45.5
Potri.001G409000 Populus trichocarpa HOM05D019858 ORTHO05D010144 1.8e-44 184.1 377 43.0
CiPaw.11G178900 Carya illinoinensis HOM05D008268 ORTHO05D010144 4.0e-44 183.0 368 45.7
Duzib170G0253 Durio zibethinus HOM05D008268 ORTHO05D010144 3.4e-43 179.9 358 45.0
Dinv22349 Davidia involucrata HOM05D008268 ORTHO05D010144 7.1e-41 172.2 351 43.6
Potri.011G125600 Populus trichocarpa HOM05D019858 ORTHO05D010144 1.3e-39 167.9 375 40.3
QL08p017136 Quercus lobata HOM05D008268 ORTHO05D010144 1.2e-37 161.4 356 42.1
Cfa020486 Carpinus fangiana HOM05D008268 ORTHO05D010144 1.4e-36 157.9 347 43.5
Gohir.D01G057100 Gossypium hirsutum HOM05D008268 ORTHO05D010144 2.4e-36 157.1 345 40.6
Gorai.002G077500 Gossypium raimondii HOM05D008268 ORTHO05D010144 2.4e-36 157.1 345 40.6
Gohir.A01G069900 Gossypium hirsutum HOM05D008268 ORTHO05D010144 2.6e-35 153.7 345 40.0
Prupe.4G192500 Prunus persica HOM05D008268 ORTHO05D010144 2.2e-34 150.6 370 35.9
Cpa.g.sc12.16 Carica papaya HOM05D008268 ORTHO05D010144 2.4e-33 147.1 344 38.1
Duzib213G0412 Durio zibethinus HOM05D008268 ORTHO05D010144 2.4e-33 147.1 353 40.8
Sabra11G0111900 Salix brachista HOM05D019858 ORTHO05D010144 9.3e-33 145.2 377 35.5
Atru.chr2.2941 Acer truncatum HOM05D008268 ORTHO05D010144 1.9e-30 137.5 345 37.1
Dinv08361 Davidia involucrata HOM05D008268 ORTHO05D010144 9.6e-30 135.2 353 38.0
MD11G1234600 Malus domestica HOM05D008268 ORTHO05D010144 4.0e-28 129.8 400 33.8
Haze_09553 Corylus avellana HOM05D008268 ORTHO05D010144 6.4e-26 122.5 346 39.3
TAR626G0659 Trochodendron aralioides HOM05D008268 ORTHO05D010144 6.4e-26 122.5 337 38.9
MD03G1216800 Malus domestica HOM05D008268 ORTHO05D010144 8.4e-26 122.1 367 34.3
Glyma.13G282800 Glycine max HOM05D008268 ORTHO05D010144 1.4e-25 121.3 357 34.2
Phvul.005G087800 Phaseolus vulgaris HOM05D008268 ORTHO05D010144 1.0e-23 115.2 340 36.2
SHI51816 Sapria himalayana HOM05D008268 ORTHO05D010144 5.6e-22 109.4 398 31.9
Actinidia09966 Actinidia chinensis HOM05D008268 ORTHO05D010144 4.8e-21 106.3 320 36.2
VMungo1080G0851 Vigna mungo HOM05D008268 ORTHO05D010144 1.8e-20 104.4 338 35.5
Nitab4.5_0001252g0050 Nicotiana tabacum HOM05D015394 ORTHO05D017774 5.3e-20 102.8 365 29.9
TWI38G2068 Tripterygium wilfordii HOM05D008268 ORTHO05D010144 1.3e-18 98.2 345 35.7
Lalb_Chr25g0286831 Lupinus albus HOM05D008268 ORTHO05D010144 4.9e-18 96.3 368 32.6
Glyma.12G217800 Glycine max HOM05D008268 ORTHO05D010144 2.4e-17 94.0 186 40.9
Oeu061273.1 Olea europaea HOM05D008268 ORTHO05D010144 2.4e-17 94.0 342 32.2
RhsimUnG0172800 Rhododendron simsii HOM05D047612 ORTHO05D010144 9.3e-17 92.0 336 32.1
MBI02_g46151_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 1.6e-16 91.3 300 32.0
Rhsim06G0192000 Rhododendron simsii HOM05D008268 ORTHO05D010144 1.6e-16 91.3 342 33.0
Nn1g06831 Nelumbo nucifera HOM05D008268 ORTHO05D010144 3.5e-16 90.1 357 32.5
CSS0042196 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 4.6e-16 89.7 315 33.3
CSS0041304 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 6.0e-16 89.4 316 33.2
MELO3C018179.2 Cucumis melo HOM05D008268 ORTHO05D010144 1.3e-15 88.2 340 31.5
Nitab4.5_0000297g0210 Nicotiana tabacum HOM05D015394 ORTHO05D017774 1.8e-15 87.8 360 29.4
MBI02_g38752_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 3.9e-15 86.7 300 31.3
COL.COLO4_09500 Corchorus olitorius HOM05D008268 ORTHO05D010144 1.5e-14 84.7 227 36.6
CsaV3_3G044260 Cucumis sativus L. HOM05D008268 ORTHO05D010144 1.5e-14 84.7 330 30.0
Medtr2g081240 Medicago truncatula HOM05D008268 ORTHO05D010144 1.5e-14 84.7 344 31.4
ClCG11G018600 Citrullus lanatus HOM05D008268 ORTHO05D010144 7.4e-14 82.4 356 30.9
THA.LOC104799901 Tarenaya hassleriana HOM05D010655 ORTHO05D012747 7.4e-14 82.4 345 31.0
Sabra15G0071800 Salix brachista HOM05D019858 ORTHO05D010144 1.3e-13 81.6 219 33.8
Peaxi162Scf00000g07812 Petunia axillaris HOM05D015394 ORTHO05D017774 3.7e-13 80.1 318 29.2
RcHm_v2.0_Chr6g0255571 Rosa chinensis HOM05D014484 ORTHO05D017021 3.7e-13 80.1 299 27.4
RhsimUnG0257100 Rhododendron simsii HOM05D047612 ORTHO05D010144 2.4e-12 77.4 347 30.3
THA.LOC104809278 Tarenaya hassleriana HOM05D010655 ORTHO05D012747 3.1e-12 77.0 369 31.7
arahy.Tifrunner.gnm1.ann1.Y898LB Arachis hypogaea HOM05D008268 ORTHO05D010144 4.0e-12 76.6 146 38.4
CANSAT11G1352 Cannabis sativa HOM05D008268 ORTHO05D010144 4.0e-12 76.6 380 29.5
Ca_01792_v3 Cicer arietinum L. HOM05D008268 ORTHO05D010144 1.2e-11 75.1 95 49.5
arahy.Tifrunner.gnm1.ann1.R70FHG Arachis hypogaea HOM05D008268 ORTHO05D010144 7.6e-11 72.4 312 28.2
Psat5g247560 Pisum sativum HOM05D008268 ORTHO05D010144 7.6e-11 72.4 324 29.3
GSVIVG01014468001 Vitis vinifera HOM05D008268 ORTHO05D010144 3.8e-10 70.1 238 34.9
FAN15G0243 Fragaria x ananassa HOM05D014484 ORTHO05D017021 4.9e-10 69.7 348 28.7
PGR083G1493 Punica granatum HOM05D008268 ORTHO05D010144 4.9e-10 69.7 228 34.6
Solyc07g063670.2 Solanum lycopersicum HOM05D015394 ORTHO05D017774 1.9e-09 67.8 337 26.1
FAN27G0943 Fragaria x ananassa HOM05D014484 ORTHO05D017021 7.1e-09 65.9 371 29.4
Migut.M01849 Erythranthe guttata HOM05D008268 ORTHO05D010144 9.3e-09 65.5 282 29.4
AT4G27330 Arabidopsis thaliana HOM05D010655 ORTHO05D012747 2.1e-08 64.3 371 27.0
CAN.G162.112 Capsicum annuum HOM05D015394 ORTHO05D017774 6.0e-08 62.8 338 26.6
TPR.G32855 Trifolium pratense HOM05D008268 ORTHO05D010144 6.0e-08 62.8 342 30.1
AL7G25480 Arabidopsis lyrata HOM05D010655 ORTHO05D012747 7.9e-08 62.4 369 27.4
Nn1g03824 Nelumbo nucifera HOM05D008268 ORTHO05D010144 1.0e-07 62.0 289 27.7
Sopen07g031850 Solanum pennellii HOM05D015394 ORTHO05D017774 1.8e-07 61.2 337 25.2
Eucgr.F01064 Eucalyptus grandis HOM05D008268 ORTHO05D010144 3.0e-07 60.5 124 43.5
Peaxi162Scf01216g00063 Petunia axillaris HOM05D015394 ORTHO05D017774 5.1e-07 59.7 370 26.8
FvH4_2g05340 Fragaria vesca HOM05D014484 ORTHO05D017021 1.1e-06 58.5 351 28.2
FAN24G1810 Fragaria x ananassa HOM05D014484 ORTHO05D017021 1.1e-06 58.5 351 28.2
Sed0023643 Sechium edule HOM05D008268 ORTHO05D010144 1.9e-06 57.8 338 28.1
PGSC0003DMG400019280 Solanum tuberosum HOM05D015394 ORTHO05D017774 2.5e-06 57.4 109 38.5
A01p18510 Brassica napus HOM05D010655 ORTHO05D012747 3.3e-06 57.0 331 28.4
BraA01t01800Z Brassica rapa HOM05D010655 ORTHO05D012747 3.3e-06 57.0 330 28.2
CARHR234980 Cardamine hirsuta HOM05D010655 ORTHO05D012747 7.4e-06 55.8 341 29.3
Lsat_1_v5_gn_0_5400 Lactuca sativa HOM05D008268 ORTHO05D010144 7.4e-06 55.8 333 28.5
Lalb_Chr20g0110041 Lupinus albus HOM05D008268 ORTHO05D010144 9.6e-06 55.5 137 37.2


User provided reference genes

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