Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G076000 Manihot esculenta HOM05D004191 ORTHO05D004887 2.9e-105 385.2 189 100.0
Potri.001G418400 Populus trichocarpa HOM05D004191 ORTHO05D004887 7.7e-90 334.0 186 84.9
Sabra16G0284100 Salix brachista HOM05D004191 ORTHO05D004887 1.0e-89 333.6 186 84.4
FvH4_3g21920 Fragaria vesca HOM05D004191 ORTHO05D004887 1.7e-89 332.8 185 84.9
FAN16G1028 Fragaria x ananassa HOM05D004191 ORTHO05D004887 1.7e-89 332.8 185 84.9
RcHm_v2.0_Chr5g0037731 Rosa chinensis HOM05D004191 ORTHO05D004887 1.7e-89 332.8 185 84.9
FAN21G0017 Fragaria x ananassa HOM05D004191 ORTHO05D004887 3.8e-89 331.6 185 84.3
FAN25G1832 Fragaria x ananassa HOM05D004191 ORTHO05D004887 5.0e-89 331.3 185 83.8
MD03G1210500 Malus domestica HOM05D004191 ORTHO05D004887 5.0e-89 331.3 185 84.3
Manes.03G123300 Manihot esculenta HOM05D004191 ORTHO05D004887 5.0e-89 331.3 186 86.0
Prupe.4G204700 Prunus persica HOM05D004191 ORTHO05D004887 5.0e-89 331.3 185 84.3
MD11G1225200 Malus domestica HOM05D004191 ORTHO05D004887 1.5e-88 329.7 185 83.8
QL08p013180 Quercus lobata HOM05D004191 ORTHO05D004887 1.5e-88 329.7 185 84.3
CiPaw.12G126500 Carya illinoinensis HOM05D004191 ORTHO05D004887 1.9e-88 329.3 186 84.4
Duzib093G1201 Durio zibethinus HOM05D004191 ORTHO05D004887 2.5e-88 328.9 185 84.9
Thecc.05G140700 Theobroma cacao HOM05D004191 ORTHO05D004887 2.5e-88 328.9 186 84.4
CANSAT80G0944 Cannabis sativa HOM05D004191 ORTHO05D004887 3.2e-88 328.6 186 84.4
CiPaw.11G184500 Carya illinoinensis HOM05D004191 ORTHO05D004887 3.2e-88 328.6 186 83.9
Dinv40713 Davidia involucrata HOM05D004191 ORTHO05D004887 3.2e-88 328.6 186 84.9
PGR031G0276 Punica granatum HOM05D004191 ORTHO05D004887 4.2e-88 328.2 184 85.3
Lj1A865T18 Lonicera japonica HOM05D004191 ORTHO05D004887 5.5e-88 327.8 186 83.3
Ciclev10009626m.g Citrus clementina HOM05D004191 ORTHO05D004887 7.2e-88 327.4 186 83.3
CSS0034391 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 9.4e-88 327.0 186 83.9
Aqoxy4G00334 Aquilegia oxysepala HOM05D004191 ORTHO05D004887 1.6e-87 326.2 186 83.3
Lalb_Chr19g0134771 Lupinus albus HOM05D004191 ORTHO05D004887 1.6e-87 326.2 186 83.3
Actinidia34670 Actinidia chinensis HOM05D004191 ORTHO05D004887 2.1e-87 325.9 186 83.9
Cpa.g.sc97.62 Carica papaya HOM05D004191 ORTHO05D004887 2.1e-87 325.9 186 82.8
Duzib106G0849 Durio zibethinus HOM05D004191 ORTHO05D004887 2.1e-87 325.9 185 83.8
Nitab4.5_0002838g0150 Nicotiana tabacum HOM05D004191 ORTHO05D004887 2.1e-87 325.9 186 83.3
Eucgr.F03430 Eucalyptus grandis HOM05D004191 ORTHO05D004887 2.7e-87 325.5 183 84.7
HanXRQChr02g0054141 Helianthus annuus HOM05D004191 ORTHO05D004887 2.7e-87 325.5 186 82.8
Lj3g0027602 Lotus japonicus HOM05D004191 ORTHO05D004887 2.7e-87 325.5 186 83.9
MBI02_g10101_MAGBIO Magnolia biondii HOM05D004191 ORTHO05D004887 2.7e-87 325.5 186 82.8
Nitab4.5_0005420g0050 Nicotiana tabacum HOM05D004191 ORTHO05D004887 2.7e-87 325.5 186 82.8
Solyc10g006490.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 2.7e-87 325.5 186 83.3
ECA236G4841 Erigeron canadensis HOM05D004191 ORTHO05D004887 3.6e-87 325.1 186 82.3
TAR371G0103 Trochodendron aralioides HOM05D004191 ORTHO05D004887 3.6e-87 325.1 186 82.8
GSVIVG01002004001 Vitis vinifera HOM05D004191 ORTHO05D004887 4.7e-87 324.7 186 83.3
COL.COLO4_05062 Corchorus olitorius HOM05D004191 ORTHO05D004887 6.1e-87 324.3 186 82.8
Gohir.A09G118400 Gossypium hirsutum HOM05D004191 ORTHO05D004887 6.1e-87 324.3 185 83.2
Gohir.D09G115300 Gossypium hirsutum HOM05D004191 ORTHO05D004887 6.1e-87 324.3 185 83.2
Gorai.006G132900 Gossypium raimondii HOM05D004191 ORTHO05D004887 6.1e-87 324.3 185 83.2
ATR0609G026 Amborella trichopoda HOM05D004191 ORTHO05D004887 8.0e-87 323.9 186 83.3
PGSC0003DMG400005405 Solanum tuberosum HOM05D004191 ORTHO05D004887 8.0e-87 323.9 186 82.3
FAN11G1314 Fragaria x ananassa HOM05D004191 ORTHO05D004887 1.0e-86 323.6 198 79.3
Lsat_1_v5_gn_7_108481 Lactuca sativa HOM05D004191 ORTHO05D004887 1.0e-86 323.6 186 82.3
arahy.Tifrunner.gnm1.ann1.HY89VY Arachis hypogaea HOM05D004191 ORTHO05D004887 1.4e-86 323.2 186 82.3
CSS0028201 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 1.4e-86 323.2 186 83.3
Ca_18852_v3 Cicer arietinum L. HOM05D004191 ORTHO05D004887 1.4e-86 323.2 186 83.3
Cc05_g13280 Coffea canephora HOM05D004191 ORTHO05D004887 1.4e-86 323.2 185 82.7
Solyc01g096530.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 1.4e-86 323.2 186 82.3
THA.LOC104799884 Tarenaya hassleriana HOM05D004191 ORTHO05D004887 1.4e-86 323.2 186 82.3
TWI39G0061 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 1.4e-86 323.2 185 82.7
AL8G30180 Arabidopsis lyrata HOM05D004191 ORTHO05D004887 1.8e-86 322.8 186 82.3
Oeu032442.1 Olea europaea HOM05D004191 ORTHO05D004887 1.8e-86 322.8 185 83.2
PSO675G8300 Papaver somniferum HOM05D004191 ORTHO05D004887 2.3e-86 322.4 186 81.7
TAR626G0300 Trochodendron aralioides HOM05D004191 ORTHO05D004887 2.3e-86 322.4 186 82.3
arahy.Tifrunner.gnm1.ann1.B9KZG1 Arachis hypogaea HOM05D004191 ORTHO05D004887 3.0e-86 322.0 186 82.3
MELO3C018102.2 Cucumis melo HOM05D004191 ORTHO05D004887 3.0e-86 322.0 183 83.1
CsaV3_3G023130 Cucumis sativus L. HOM05D004191 ORTHO05D004887 3.0e-86 322.0 183 83.1
Thhalv10019192m.g Eutrema salsugineum HOM05D004191 ORTHO05D004887 3.0e-86 322.0 186 81.7
PSO170G1932 Papaver somniferum HOM05D004191 ORTHO05D004887 3.0e-86 322.0 186 81.7
AT5G54750 Arabidopsis thaliana HOM05D004191 ORTHO05D004887 5.2e-86 321.2 186 81.2
CARHR268090 Cardamine hirsuta HOM05D004191 ORTHO05D004887 5.2e-86 321.2 186 81.7
Medtr8g027700 Medicago truncatula HOM05D004191 ORTHO05D004887 5.2e-86 321.2 186 82.8
Peaxi162Scf00082g00016 Petunia axillaris HOM05D004191 ORTHO05D004887 5.2e-86 321.2 186 81.7
vmacro16476 Vaccinium macrocarpon HOM05D004191 ORTHO05D004887 5.2e-86 321.2 186 81.7
Carub.0008s1502 Capsella rubella HOM05D004191 ORTHO05D004887 6.8e-86 320.9 186 81.2
Lalb_Chr03g0030141 Lupinus albus HOM05D004191 ORTHO05D004887 6.8e-86 320.9 186 81.2
Rhsim12G0150700 Rhododendron simsii HOM05D004191 ORTHO05D004887 6.8e-86 320.9 186 81.7
Sed0000628 Sechium edule HOM05D004191 ORTHO05D004887 6.8e-86 320.9 185 81.1
Aa31LG3G10650 Aethionema arabicum HOM05D004191 ORTHO05D004887 2.0e-85 319.3 186 81.2
SGA_v2.0_scaffold416G51230 Striga asiatica HOM05D004191 ORTHO05D004887 2.0e-85 319.3 186 81.2
CAN.G134.12 Capsicum annuum HOM05D004191 ORTHO05D004887 2.6e-85 318.9 186 81.2
Hma1.2p1_0049F.1_g028640 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 2.6e-85 318.9 189 82.0
SpUn0117_0020 Schrenkiella parvula HOM05D004191 ORTHO05D004887 2.6e-85 318.9 186 80.6
VMungo1127G0852 Vigna mungo HOM05D004191 ORTHO05D004887 2.6e-85 318.9 185 82.2
Glyma.06G269400 Glycine max HOM05D004191 ORTHO05D004887 3.4e-85 318.5 185 82.2
SalBow7G2717 Salvia bowleyana HOM05D004191 ORTHO05D004887 3.4e-85 318.5 186 81.2
CDE02G0163 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 4.4e-85 318.2 186 80.6
Sed0012224 Sechium edule HOM05D004191 ORTHO05D004887 4.4e-85 318.2 185 80.5
BcaB07g31034 Brassica carinata HOM05D004191 ORTHO05D004887 5.7e-85 317.8 186 80.1
A09p20070 Brassica napus HOM05D004191 ORTHO05D004887 5.7e-85 317.8 186 80.1
C09p25460 Brassica napus HOM05D004191 ORTHO05D004887 5.7e-85 317.8 186 80.1
BraA09t37620Z Brassica rapa HOM05D004191 ORTHO05D004887 5.7e-85 317.8 186 80.1
Glyma.12G135200 Glycine max HOM05D004191 ORTHO05D004887 5.7e-85 317.8 185 81.6
Phvul.011G139700 Phaseolus vulgaris HOM05D004191 ORTHO05D004887 5.7e-85 317.8 185 81.6
Sopen01g040260 Solanum pennellii HOM05D004191 ORTHO05D004887 5.7e-85 317.8 186 81.2
Ah.02g116780 Amaranthus hybridus HOM05D004191 ORTHO05D004887 9.8e-85 317.0 184 79.3
ATR0109G002 Amborella trichopoda HOM05D004191 ORTHO05D004887 9.8e-85 317.0 186 81.2
HPP92_013205 Vanilla planifolia HOM05D001003 ORTHO05D004887 9.8e-85 317.0 185 80.5
Oeu007633.1 Olea europaea HOM05D004191 ORTHO05D004887 1.3e-84 316.6 195 79.5
TPR.G25893 Trifolium pratense HOM05D004191 ORTHO05D004887 1.3e-84 316.6 185 82.2
Sp4g10480 Schrenkiella parvula HOM05D004191 ORTHO05D004887 1.7e-84 316.2 186 79.6
Hund11592 Selenicereus undatus HOM05D004191 ORTHO05D004887 2.2e-84 315.8 184 80.4
Sc22g0000820 Simmondsia chinensis HOM05D004191 ORTHO05D004887 2.2e-84 315.8 184 81.0
Eucgr.F00980 Eucalyptus grandis HOM05D004191 ORTHO05D004887 6.3e-84 314.3 184 79.3
PGR083G1136 Punica granatum HOM05D004191 ORTHO05D004887 6.3e-84 314.3 188 79.8
CAN.G1110.10 Capsicum annuum HOM05D004191 ORTHO05D004887 1.8e-83 312.8 200 76.5
Medtr4g081170 Medicago truncatula HOM05D004191 ORTHO05D004887 2.4e-83 312.4 186 80.6
Sopen10g002440 Solanum pennellii HOM05D004191 ORTHO05D004887 2.4e-83 312.4 205 75.1
MSTRG.6892 Avicennia marina HOM05D004191 ORTHO05D004887 3.1e-83 312.0 186 79.6
EL10Ac5g13057 Beta vulgaris HOM05D004191 ORTHO05D004887 3.1e-83 312.0 184 78.8
PSO782G4612 Papaver somniferum HOM05D004191 ORTHO05D004887 4.1e-83 311.6 202 75.2
Os03g0402000 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 9.1e-83 310.5 185 78.9
Os07g0642300 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 9.1e-83 310.5 185 78.9
TPR.G24299 Trifolium pratense HOM05D004191 ORTHO05D004887 9.1e-83 310.5 185 81.1
Migut.H01854 Erythranthe guttata HOM05D004191 ORTHO05D004887 1.6e-82 309.7 186 78.0
Zm00001eb067130 Zea mays HOM05D004191 ORTHO05D004887 2.7e-82 308.9 183 78.7
Zm00001eb433090 Zea mays HOM05D004191 ORTHO05D004887 2.7e-82 308.9 183 78.7
Migut.M01809 Erythranthe guttata HOM05D004191 ORTHO05D004887 7.7e-82 307.4 180 80.6
MSTRG.12958 Avicennia marina HOM05D004191 ORTHO05D004887 1.0e-81 307.0 186 77.4
SGA_v2.0_scaffold24G10288 Striga asiatica HOM05D004191 ORTHO05D004887 1.0e-81 307.0 186 76.9
BolC9t55449H Brassica oleracea HOM05D004191 ORTHO05D004887 1.3e-81 306.6 205 73.2
arahy.Tifrunner.gnm1.ann1.T6DWBF Arachis hypogaea HOM05D004191 ORTHO05D004887 5.0e-81 304.7 185 77.8
TWI38G1569 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 1.1e-80 303.5 206 72.3
Sc15g0001730 Simmondsia chinensis HOM05D004191 ORTHO05D004887 2.5e-80 302.4 186 76.9
ClCG05G014740 Citrullus lanatus HOM05D004191 ORTHO05D004887 1.6e-79 299.7 239 64.0
unitig_0.g2386 Utricularia gibba HOM05D004191 ORTHO05D004887 2.1e-79 299.3 185 77.8
Mapoly0006s0106 Marchantia polymorpha HOM05D004191 ORTHO05D004887 1.3e-76 290.0 183 73.2
Hund24114 Selenicereus undatus HOM05D004191 ORTHO05D004887 1.7e-76 289.7 213 68.5
SMO165G0074 Selaginella moellendorffii HOM05D004191 ORTHO05D004887 2.2e-76 289.3 187 72.7
Lsat_1_v5_gn_5_5821 Lactuca sativa HOM05D004191 ORTHO05D004887 2.8e-76 288.9 172 77.9
Nn1g08677 Nelumbo nucifera HOM05D004191 ORTHO05D004887 1.4e-75 286.6 166 81.3
AagrBONN_evm.TU.Sc2ySwM_344.5600 Anthoceros agrestis HOM05D004191 ORTHO05D004887 5.4e-75 284.6 179 72.1
AagrBONN_evm.TU.Sc2ySwM_344.5601 Anthoceros agrestis HOM05D004191 ORTHO05D004887 5.4e-75 284.6 179 72.1
Eucgr.F00978 Eucalyptus grandis HOM05D004191 ORTHO05D004887 3.5e-74 282.0 166 78.3
AagrBONN_evm.TU.Sc2ySwM_362.1587 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.7e-73 279.6 179 70.4
AagrBONN_evm.TU.Sc2ySwM_344.5599 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.1e-72 276.9 169 74.0
Peaxi162Scf01434g00020 Petunia axillaris HOM05D004191 ORTHO05D004887 5.6e-72 274.6 186 73.7
CBR_g9060 Chara braunii HOM05D004191 ORTHO05D004887 2.3e-70 269.2 187 67.9
Nitab4.5_0002342g0090 Nicotiana tabacum HOM05D004191 ORTHO05D004887 2.0e-69 266.2 186 70.4
BcaB07g30600 Brassica carinata HOM05D004191 ORTHO05D004887 9.8e-69 263.8 186 71.0
Pp3c6_29730 Physcomitrium patens HOM05D004191 ORTHO05D004887 2.9e-68 262.3 171 70.2
BcaC04g21960 Brassica carinata HOM05D004191 ORTHO05D004887 3.7e-68 261.9 153 80.4
Nitab4.5_0002229g0200 Nicotiana tabacum HOM05D004191 ORTHO05D004887 4.9e-68 261.5 186 69.9
Dinv22301 Davidia involucrata HOM05D004191 ORTHO05D004887 1.1e-67 260.4 148 85.1
Hma1.2p1_0774F.1_g216345 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 4.1e-67 258.5 162 77.8
arahy.Tifrunner.gnm1.ann1.N3PQ25 Arachis hypogaea HOM05D004191 ORTHO05D004887 1.2e-66 256.9 185 68.6
Peaxi162Scf01475g00001 Petunia axillaris HOM05D004191 ORTHO05D004887 5.0e-65 251.5 186 69.4
AUR62039960 Chenopodium quinoa HOM05D004191 ORTHO05D004887 4.7e-63 245.0 145 77.9
Cpa.g.sc2.173 Carica papaya HOM05D004191 ORTHO05D004887 1.4e-62 243.4 213 55.9
Cre03.g145607 Chlamydomonas reinhardtii HOM05D004191 ORTHO05D004887 7.5e-61 237.7 183 60.1
AUR62007507 Chenopodium quinoa HOM05D004191 ORTHO05D004887 1.7e-60 236.5 158 70.3
Peaxi162Scf08257g00003 Petunia axillaris HOM05D004191 ORTHO05D004887 8.3e-60 234.2 186 65.6
PGSC0003DMG400029125 Solanum tuberosum HOM05D004191 ORTHO05D004887 2.8e-55 219.2 186 60.2
Sp2g07630 Schrenkiella parvula HOM05D004191 ORTHO05D004887 3.2e-51 205.7 123 78.9
Cfa020410 Carpinus fangiana HOM05D004191 ORTHO05D004887 1.7e-49 199.9 103 89.3
PRCOL_00004686 Prasinoderma coloniale HOM05D004191 ORTHO05D004887 3.9e-49 198.7 167 53.9
AagrBONN_evm.TU.Sc2ySwM_362.1580 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.5e-48 196.8 127 69.3
COL.COLO4_37956 Corchorus olitorius HOM05D004191 ORTHO05D004887 3.1e-46 189.1 98 86.7
MCO14G457 Micromonas commoda HOM05D004191 ORTHO05D004887 4.4e-45 185.3 179 51.4
Psat7g161320 Pisum sativum HOM05D004191 ORTHO05D004887 9.9e-45 184.1 139 64.7
TWI38G1856 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 2.7e-42 176.0 103 77.7
CDE05G2537 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 1.3e-41 173.7 105 80.0
SEGI_28528 Sequoiadendron giganteum HOM05D004191 ORTHO05D004887 8.7e-41 171.0 98 76.5
AUR62030012 Chenopodium quinoa HOM05D004191 ORTHO05D004887 8.1e-39 164.5 178 51.1
Nn5g28123 Nelumbo nucifera HOM05D004191 ORTHO05D004887 4.8e-31 138.7 84 79.8
HanXRQChr11g0332951 Helianthus annuus HOM05D004191 ORTHO05D004887 3.5e-26 122.5 135 54.1
Pp3c2_32190 Physcomitrium patens HOM05D004191 ORTHO05D004887 1.4e-19 100.5 67 68.7
Cfa020409 Carpinus fangiana HOM05D004191 ORTHO05D004887 6.2e-15 85.1 51 80.4
COL.COLO4_37955 Corchorus olitorius HOM05D004191 ORTHO05D004887 6.9e-14 81.6 51 78.4
Haze_09622 Corylus avellana HOM05D004191 ORTHO05D004887 4.5e-13 79.0 48 79.2
Actinidia19733 Actinidia chinensis HOM05D004191 ORTHO05D004887 1.0e-12 77.8 41 85.4
Ah.07g199550 Amaranthus hybridus HOM05D004191 ORTHO05D004887 5.5e-11 72.0 41 75.6
Ah.12g056770 Amaranthus hybridus HOM05D004191 ORTHO05D004887 5.5e-11 72.0 68 52.9
Haze_09618 Corylus avellana HOM05D004191 ORTHO05D004887 9.3e-11 71.2 44 77.3
Medtr4g027400 Medicago truncatula HOM05D004191 ORTHO05D004887 9.3e-11 71.2 46 73.9
Ah.07g199480 Amaranthus hybridus HOM05D004191 ORTHO05D060174 2.1e-10 70.1 39 74.4
Rhsim01G0090000 Rhododendron simsii HOM05D004191 ORTHO05D004887 7.9e-10 68.2 76 51.3


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