Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G075900 Manihot esculenta HOM05D007475 ORTHO05D005877 1.9e-93 345.9 179 100.0
Manes.03G123501 Manihot esculenta HOM05D006536 ORTHO05D005877 9.7e-26 120.9 156 48.1
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 2.9e-22 109.4 149 38.3
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 2.5e-21 106.3 152 40.8
Nitab4.5_0003924g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.4e-19 100.5 132 37.1
SHI26637 Sapria himalayana HOM05D006536 ORTHO05D005877 2.3e-19 99.8 138 34.8
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 3.0e-19 99.4 147 40.8
SHI26638 Sapria himalayana HOM05D006536 ORTHO05D005877 8.8e-19 97.8 138 34.8
Peaxi162Scf00714g00424 Petunia axillaris HOM05D006536 ORTHO05D005877 1.5e-18 97.1 148 37.8
SHI26633 Sapria himalayana HOM05D006536 ORTHO05D005877 7.5e-18 94.7 138 34.1
SHI26644 Sapria himalayana HOM05D006536 ORTHO05D005877 7.5e-18 94.7 147 31.3
Solyc08g080480.3 Solanum lycopersicum HOM05D006536 ORTHO05D005877 6.3e-17 91.7 151 35.1
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 6.3e-17 91.7 145 38.6
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 1.8e-16 90.1 145 43.4
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 2.4e-16 89.7 146 35.6
Manes.03G123600 Manihot esculenta HOM05D006536 ORTHO05D005877 2.4e-16 89.7 145 39.3
Ciclev10009789m.g Citrus clementina HOM05D007475 ORTHO05D009529 4.1e-16 89.0 146 39.0
CAN.G981.16 Capsicum annuum HOM05D006536 ORTHO05D005877 5.4e-16 88.6 145 35.9
Sopen08g028800 Solanum pennellii HOM05D006536 ORTHO05D005877 3.5e-15 85.9 106 39.6
Duzib268G0059 Durio zibethinus HOM05D006536 ORTHO05D005877 5.9e-15 85.1 144 35.4
Sopen08g028810 Solanum pennellii HOM05D006536 ORTHO05D005877 1.0e-14 84.3 111 37.8
vmacro11763 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 1.3e-14 84.0 150 36.0
CAN.G981.18 Capsicum annuum HOM05D006536 ORTHO05D005877 1.7e-14 83.6 136 36.0
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.9e-14 82.8 156 35.3
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.8e-14 82.4 156 35.9
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.0e-14 82.0 160 36.9
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.0e-14 82.0 154 34.4
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 6.5e-14 81.6 146 34.2
Peaxi162Scf00714g00432 Petunia axillaris HOM05D006536 ORTHO05D005877 6.5e-14 81.6 102 42.2
QL08p013066 Quercus lobata HOM05D006536 ORTHO05D005877 1.1e-13 80.9 144 37.5
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.5e-13 80.5 159 35.8
Nitab4.5_0005213g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 7.2e-13 78.2 141 31.9
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.2e-12 77.4 154 33.8
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.2e-12 77.4 154 33.8
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.2e-12 77.4 154 33.8
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 1.2e-12 77.4 148 31.1
Carub.0008s0615 Capsella rubella HOM05D007475 ORTHO05D009529 1.6e-12 77.0 141 38.3
COL.COLO4_09580 Corchorus olitorius HOM05D015826 ORTHO05D005877 1.0e-11 74.3 143 30.1
QL08p012979 Quercus lobata HOM05D006536 ORTHO05D005877 1.0e-11 74.3 146 32.9
Potri.011G134600 Populus trichocarpa HOM05D006536 ORTHO05D005877 1.8e-11 73.6 142 34.5
Solyc08g080490.3 Solanum lycopersicum HOM05D006536 ORTHO05D005877 4.0e-11 72.4 140 31.4
SHI27896 Sapria himalayana HOM05D006536 ORTHO05D005877 5.2e-11 72.0 116 33.6
Carub.0007s1370 Capsella rubella HOM05D007475 ORTHO05D009529 6.8e-11 71.6 142 35.9
AL7G25650 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 2.6e-10 69.7 148 33.8
CAN.G981.17 Capsicum annuum HOM05D006536 ORTHO05D005877 3.4e-10 69.3 145 33.1
Aa31LG3G10660 Aethionema arabicum HOM05D007475 ORTHO05D009529 4.4e-10 68.9 161 32.3
Carub.0007s1368 Capsella rubella HOM05D007475 ORTHO05D009529 4.4e-10 68.9 153 34.6
AT4G27150 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 9.8e-10 67.8 152 34.9
COL.COLO4_09579 Corchorus olitorius HOM05D006536 ORTHO05D005877 9.8e-10 67.8 141 31.2
vmacro11762 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 9.8e-10 67.8 150 30.0
AL7G25660 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 1.3e-09 67.4 147 34.7
AL8G30160 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 1.3e-09 67.4 165 32.7
SHI26699 Sapria himalayana HOM05D006536 ORTHO05D005877 1.3e-09 67.4 116 31.9
AL7G25640 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 2.8e-09 66.2 146 34.2
Gohir.D05G365366 Gossypium hirsutum HOM05D015826 ORTHO05D005877 4.9e-09 65.5 144 33.3
THA.LOC104817655 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 4.9e-09 65.5 152 30.9
Sp6g16690 Schrenkiella parvula HOM05D007475 ORTHO05D009529 6.3e-09 65.1 157 36.9
AT5G54740 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 8.3e-09 64.7 165 32.1
CARHR058020 Cardamine hirsuta HOM05D007475 ORTHO05D009529 1.1e-08 64.3 153 32.7
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.4e-08 63.9 148 32.4
PSO541G3913 Papaver somniferum HOM05D006536 ORTHO05D005877 1.4e-08 63.9 147 33.3
CANSAT54G1080 Cannabis sativa HOM05D006536 ORTHO05D005877 1.8e-08 63.5 143 33.6
Atru.chr2.3226 Acer truncatum HOM05D001264 ORTHO05D001167 2.4e-08 63.2 141 31.9
Aa31LG5G10270 Aethionema arabicum HOM05D007475 ORTHO05D009529 2.4e-08 63.2 147 29.9
PGR083G1686 Punica granatum HOM05D006536 ORTHO05D005877 3.1e-08 62.8 153 32.0
AT4G27160 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 4.1e-08 62.4 145 33.1
Cpa.g.sc97.59 Carica papaya HOM05D007475 ORTHO05D009529 4.1e-08 62.4 149 32.2
Nn1g07021 Nelumbo nucifera HOM05D023228 ORTHO05D005877 5.4e-08 62.0 152 30.9
Thhalv10026791m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 7.0e-08 61.6 159 30.8
SGA_v2.0_scaffold20G09060 Striga asiatica HOM05D006536 ORTHO05D005877 7.0e-08 61.6 103 36.9
CDE11G0063 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 1.6e-07 60.5 145 32.4
Migut.H00699 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.6e-07 60.5 139 30.2
Peaxi162Scf00450g00854 Petunia axillaris HOM05D006536 ORTHO05D005877 2.0e-07 60.1 147 29.9
Sed0024994 Sechium edule HOM05D006536 ORTHO05D005877 2.0e-07 60.1 149 28.2
AT4G27170 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 2.7e-07 59.7 149 32.2
BcaC06g32708 Brassica carinata HOM05D007475 ORTHO05D009529 2.7e-07 59.7 138 31.9
CARHR289420 Cardamine hirsuta HOM05D007475 ORTHO05D009529 2.7e-07 59.7 152 29.6
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.7e-07 59.7 148 31.1
Nitab4.5_0006023g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.7e-07 59.7 149 30.9
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 3.5e-07 59.3 148 32.4
C07p55330 Brassica napus HOM05D007475 ORTHO05D009529 4.5e-07 58.9 141 31.9
BolC7t46014H Brassica oleracea HOM05D007475 ORTHO05D009529 4.5e-07 58.9 141 31.9
A03p57140 Brassica napus HOM05D007475 ORTHO05D009529 2.3e-06 56.6 141 31.2
Sp7g25120 Schrenkiella parvula HOM05D007475 ORTHO05D009529 2.3e-06 56.6 127 32.3
CDE11G0553 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 5.0e-06 55.5 150 32.7
Dinv40717 Davidia involucrata HOM05D006536 ORTHO05D005877 5.0e-06 55.5 117 35.9
Nitab4.5_0001479g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 5.0e-06 55.5 151 30.5
CANSAT11G1392 Cannabis sativa HOM05D006536 ORTHO05D005877 6.6e-06 55.1 101 29.7
SGA_v2.0_scaffold13G06718 Striga asiatica HOM05D006536 ORTHO05D005877 6.6e-06 55.1 118 34.7
BolC1t02262H Brassica oleracea HOM05D007475 ORTHO05D009529 8.6e-06 54.7 163 32.5
Gohir.A04G021300 Gossypium hirsutum HOM05D015826 ORTHO05D005877 8.6e-06 54.7 145 29.7
Gorai.009G426600 Gossypium raimondii HOM05D015826 ORTHO05D005877 8.6e-06 54.7 147 29.9
Sabra11G0120700 Salix brachista HOM05D006536 ORTHO05D005877 8.6e-06 54.7 154 26.6


User provided reference genes

Program Settings