Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 3.2e-159 565.1 293 100.0
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 5.7e-132 474.6 272 87.5
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 2.0e-129 466.1 269 87.0
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 1.3e-128 463.4 269 85.9
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 3.8e-128 461.8 269 85.9
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 5.0e-128 461.5 268 87.7
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 1.1e-127 460.3 269 86.2
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 3.2e-127 458.8 270 85.6
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 4.2e-127 458.4 269 85.5
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 1.2e-126 456.8 269 85.1
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 2.7e-126 455.7 269 85.5
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 4.7e-126 454.9 268 83.6
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 6.1e-126 454.5 269 84.8
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 1.0e-125 453.8 269 83.3
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 1.4e-125 453.4 269 84.8
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 5.1e-125 451.4 267 84.6
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 6.7e-125 451.1 283 82.0
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 6.7e-125 451.1 269 85.5
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 8.8e-125 450.7 269 84.8
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 1.1e-124 450.3 269 83.6
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 1.5e-124 449.9 269 84.4
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 1.5e-124 449.9 269 83.6
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 2.0e-124 449.5 268 82.5
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 2.6e-124 449.1 269 82.9
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 5.7e-124 448.0 269 85.5
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 7.4e-124 447.6 269 83.6
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 1.7e-123 446.4 269 82.5
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 6.3e-123 444.5 269 81.8
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 8.2e-123 444.1 269 84.0
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 1.8e-122 443.0 269 83.6
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 1.8e-122 443.0 269 81.8
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 2.4e-122 442.6 269 81.8
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 2.4e-122 442.6 268 82.8
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 3.1e-122 442.2 269 81.4
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 4.1e-122 441.8 269 81.8
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 4.1e-122 441.8 279 80.3
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 5.3e-122 441.4 269 82.9
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 5.3e-122 441.4 269 83.3
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 7.0e-122 441.0 269 84.0
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.5e-121 439.9 269 82.9
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 1.5e-121 439.9 269 81.8
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 1.5e-121 439.9 270 81.9
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 2.6e-121 439.1 269 82.2
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 2.6e-121 439.1 269 81.8
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 2.6e-121 439.1 269 81.4
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 4.5e-121 438.3 269 81.8
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 5.9e-121 438.0 270 81.9
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 2.9e-120 435.6 269 83.3
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 3.8e-120 435.3 270 81.9
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 6.5e-120 434.5 269 82.2
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 8.5e-120 434.1 267 80.5
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 1.1e-119 433.7 269 81.4
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 1.1e-119 433.7 270 81.9
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 1.4e-119 433.3 266 82.3
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 1.9e-119 433.0 269 81.0
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 2.5e-119 432.6 270 81.9
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 3.2e-119 432.2 269 81.4
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 7.2e-119 431.0 278 79.5
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 9.4e-119 430.6 302 76.2
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 9.4e-119 430.6 302 76.2
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 1.2e-118 430.3 267 79.8
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 1.6e-118 429.9 270 81.1
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 3.6e-118 428.7 269 80.3
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 3.6e-118 428.7 269 81.0
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 6.1e-118 427.9 270 81.1
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 6.1e-118 427.9 269 79.6
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 8.0e-118 427.6 269 80.3
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 1.4e-117 426.8 269 81.8
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 2.3e-117 426.0 269 80.3
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 2.3e-117 426.0 269 80.7
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 2.3e-117 426.0 270 80.7
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 3.9e-117 425.2 269 80.7
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 5.2e-117 424.9 269 78.8
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 6.7e-117 424.5 269 81.0
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 2.6e-116 422.5 270 78.9
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 2.6e-116 422.5 269 81.4
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 3.3e-116 422.2 270 80.4
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 2.2e-115 419.5 269 76.6
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 2.2e-115 419.5 269 78.1
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 3.7e-115 418.7 269 77.7
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 6.3e-115 417.9 269 77.7
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 6.3e-115 417.9 269 77.7
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 6.3e-115 417.9 269 77.7
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 6.3e-115 417.9 269 77.7
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 2.0e-113 412.9 298 74.5
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 1.1e-111 407.1 269 78.1
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 9.4e-111 404.1 268 76.5
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 4.0e-109 398.7 269 76.6
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 4.0e-109 398.7 303 69.0
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 8.3e-107 391.0 269 75.8
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 1.1e-95 354.0 268 64.2
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 8.9e-93 344.4 268 63.8
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 4.1e-90 335.5 269 62.5
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.2e-84 317.4 203 76.8
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 9.8e-76 287.7 273 58.6
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 4.1e-74 282.3 178 80.9
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 1.0e-72 277.7 228 68.4
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 5.2e-69 265.4 264 54.5
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 1.2e-68 264.2 277 52.0
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 9.9e-68 261.2 179 76.5
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 8.3e-67 258.1 293 48.5
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.0e-64 251.1 155 82.6
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.0e-60 236.9 185 70.8
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 4.4e-60 235.7 178 69.7
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 2.9e-59 233.0 132 88.6
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 5.4e-58 228.8 268 48.1
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 5.6e-47 192.2 124 77.4
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 1.9e-39 167.2 132 66.7
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 8.1e-38 161.8 91 87.9
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 2.0e-36 157.1 203 47.3
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 1.5e-31 141.0 121 58.7
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 4.0e-29 132.9 133 56.4
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 4.5e-28 129.4 79 79.7
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 1.3e-24 117.9 66 87.9
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 3.3e-23 113.2 71 77.5
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 4.3e-23 112.8 71 73.2
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 5.3e-21 105.9 57 89.5
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 9.0e-21 105.1 88 59.1
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 6.9e-13 79.0 43 88.4
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 1.2e-12 78.2 46 82.6
Zm00001eb241410 Zea mays HOM05D006520 ORTHO05D442212 3.9e-08 63.2 50 62.0


User provided reference genes

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