Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 4.7e-83 311.2 167 100.0
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 5.3e-58 228.0 167 74.9
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 7.4e-52 207.6 165 67.3
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 7.1e-47 191.0 167 64.7
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 1.6e-46 189.9 163 65.0
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 2.7e-46 189.1 167 61.1
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 1.0e-45 187.2 169 62.7
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 1.3e-45 186.8 168 61.3
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 2.3e-45 186.0 168 60.7
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 3.0e-45 185.7 167 61.7
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 1.9e-44 183.0 168 61.9
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 7.4e-44 181.0 167 62.3
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 9.7e-44 180.6 167 59.9
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 1.8e-42 176.4 165 59.4
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 5.3e-42 174.9 167 58.1
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 5.9e-41 171.4 167 58.1
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 5.9e-41 171.4 167 57.5
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 2.9e-40 169.1 167 56.9
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 5.0e-40 168.3 168 57.7
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 8.5e-40 167.5 167 58.7
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 1.9e-39 166.4 168 56.5
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 2.5e-39 166.0 167 56.9
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 5.5e-39 164.9 167 56.3
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 1.2e-38 163.7 171 55.6
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.6e-38 163.3 169 56.2
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 1.4e-37 160.2 167 55.7
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 1.4e-37 160.2 168 57.1
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 1.8e-37 159.8 168 56.5
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.8e-37 159.8 167 55.7
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.8e-37 159.8 167 55.7
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 1.5e-36 156.8 173 53.2
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 1.9e-36 156.4 168 55.4
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 7.4e-36 154.5 174 54.0
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 1.3e-35 153.7 167 55.7
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 1.7e-35 153.3 170 53.5
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.7e-35 153.3 171 54.4
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 2.8e-35 152.5 163 52.8
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 1.1e-34 150.6 168 52.4
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 1.4e-34 150.2 170 52.4
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.4e-34 150.2 168 52.4
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 6.9e-34 147.9 168 51.2
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 6.9e-34 147.9 168 51.2
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 6.9e-34 147.9 168 52.4
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 2.0e-33 146.4 168 54.2
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 2.0e-33 146.4 169 48.5
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 2.6e-33 146.0 170 51.8
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 2.6e-33 146.0 175 53.1
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 5.9e-33 144.8 168 51.2
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.0e-32 144.1 168 53.6
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 2.2e-32 142.9 168 53.6
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 2.2e-32 142.9 175 52.6
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 2.9e-32 142.5 179 53.1
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 6.5e-32 141.4 177 51.4
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 1.1e-31 140.6 176 49.4
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 1.4e-31 140.2 163 48.5
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 7.2e-31 137.9 170 49.4
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 1.6e-30 136.7 167 47.3
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.0e-29 134.0 163 48.5
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 1.8e-29 133.3 168 49.4
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 3.0e-29 132.5 167 47.3
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 6.7e-29 131.3 167 46.1
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 2.0e-28 129.8 165 48.5
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 9.7e-28 127.5 175 46.9
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 9.7e-28 127.5 167 47.9
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 9.7e-28 127.5 167 49.7
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.3e-27 127.1 156 46.8
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 1.7e-27 126.7 167 44.9
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 2.2e-27 126.3 167 44.3
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 3.7e-27 125.6 171 48.0
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 3.7e-27 125.6 167 44.3
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 1.1e-26 124.0 168 42.9
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 1.4e-26 123.6 162 46.9
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 5.3e-26 121.7 166 46.4
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 6.9e-26 121.3 167 44.3
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 9.1e-26 120.9 169 41.4
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 1.5e-25 120.2 166 48.2
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 3.4e-25 119.0 208 40.9
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 3.4e-25 119.0 171 45.0
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 7.7e-25 117.9 170 48.8
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 3.8e-24 115.5 171 42.7
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 3.8e-24 115.5 170 42.4
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 6.5e-24 114.8 167 43.7
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 8.5e-24 114.4 166 47.6
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 1.1e-23 114.0 167 47.3
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 1.1e-23 114.0 169 40.8
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 1.9e-23 113.2 181 41.4
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 2.5e-23 112.8 167 43.7
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 3.2e-23 112.5 167 43.1
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 3.2e-23 112.5 167 44.9
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 9.4e-23 110.9 166 44.6
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 2.1e-22 109.8 169 45.0
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 4.7e-22 108.6 138 52.2
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 6.1e-22 108.2 165 46.1
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 1.4e-21 107.1 161 47.2
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 3.0e-21 105.9 176 40.9
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 3.0e-21 105.9 176 40.9
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 3.0e-21 105.9 174 40.8
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 3.9e-21 105.5 209 37.8
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 3.9e-21 105.5 174 40.8
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 5.2e-21 105.1 209 37.8
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 5.2e-21 105.1 185 38.9
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 5.2e-21 105.1 180 42.2
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 6.7e-21 104.8 165 41.2
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 3.3e-20 102.4 176 40.3
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 3.3e-20 102.4 168 45.8
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 4.4e-20 102.1 204 37.3
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 1.3e-19 100.5 151 45.7
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 1.3e-19 100.5 172 40.1
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 4.8e-19 98.6 188 37.8
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 6.3e-19 98.2 170 41.8
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 6.3e-19 98.2 173 41.6
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 8.2e-19 97.8 164 43.3
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 1.4e-18 97.1 162 43.2
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 1.4e-18 97.1 169 43.2
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 1.4e-18 97.1 188 37.2
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 1.4e-18 97.1 168 41.7
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 4.1e-18 95.5 177 37.9
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 2.0e-17 93.2 189 35.4
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 4.5e-17 92.0 163 38.0
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 7.7e-17 91.3 162 37.7
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 1.0e-16 90.9 193 36.8
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 2.9e-16 89.4 151 43.7
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 5.5e-15 85.1 153 37.3
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 1.2e-14 84.0 158 38.6
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 1.6e-14 83.6 156 36.5
HanXRQChr05g0159131 Helianthus annuus HOM05D005769 ORTHO05D006851 2.1e-14 83.2 164 39.0
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 2.7e-14 82.8 161 43.5
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 2.7e-14 82.8 166 39.2
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 1.4e-13 80.5 152 38.2
Lalb_Chr10g0106921 Lupinus albus HOM05D005769 ORTHO05D006851 6.7e-13 78.2 127 44.1
DCAR_021174 Daucus carota HOM05D005769 ORTHO05D006851 5.0e-08 62.0 156 34.0
HanXRQChr10g0305811 Helianthus annuus HOM05D005769 ORTHO05D006851 1.6e-06 57.0 139 34.5
HPP92_012395 Vanilla planifolia HOM05D005769 ORTHO05D006851 2.1e-06 56.6 159 34.0
HPP92_012322 Vanilla planifolia HOM05D005769 ORTHO05D006851 2.7e-06 56.2 159 34.6
Oeu021395.2 Olea europaea HOM05D005769 ORTHO05D006851 3.6e-06 55.8 73 39.7


User provided reference genes

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