Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G063300 Manihot esculenta HOM05D007550 ORTHO05D009474 2.3e-70 268.9 140 100.0
GSVIVG01037778001 Vitis vinifera HOM05D007550 ORTHO05D009474 4.3e-37 158.3 98 73.5
QL08p005510 Quercus lobata HOM05D007550 ORTHO05D009474 4.8e-36 154.8 133 66.2
Nn1g07439 Nelumbo nucifera HOM05D007550 ORTHO05D009474 2.4e-35 152.5 86 82.6
Thecc.07G022400 Theobroma cacao HOM05D007550 ORTHO05D009474 5.3e-35 151.4 86 79.1
TAR626G1551 Trochodendron aralioides HOM05D007550 ORTHO05D009474 9.0e-35 150.6 138 60.9
Dinv10312 Davidia involucrata HOM05D007550 ORTHO05D009474 2.0e-34 149.4 126 64.3
TWI38G1227 Tripterygium wilfordii HOM05D007550 ORTHO05D009474 2.0e-34 149.4 129 63.6
CiPaw.12G135900 Carya illinoinensis HOM05D007550 ORTHO05D009474 2.6e-34 149.1 134 63.4
Atru.chr2.3607 Acer truncatum HOM05D007550 ORTHO05D009474 3.4e-34 148.7 91 75.8
LjContig00272g0022958 Lotus japonicus HOM05D007550 ORTHO05D009474 4.5e-34 148.3 146 57.5
FvH4_3g24050 Fragaria vesca HOM05D007550 ORTHO05D009474 7.6e-34 147.5 95 76.8
FAN11G2859 Fragaria x ananassa HOM05D007550 ORTHO05D009474 7.6e-34 147.5 95 76.8
MD11G1204800 Malus domestica HOM05D007550 ORTHO05D009474 1.3e-33 146.7 136 60.3
Sc18g0004240 Simmondsia chinensis HOM05D007550 ORTHO05D009474 1.7e-33 146.4 147 58.5
Lj1A885G31 Lonicera japonica HOM05D007550 ORTHO05D009474 2.2e-33 146.0 148 54.1
RcHm_v2.0_Chr5g0042631 Rosa chinensis HOM05D007550 ORTHO05D009474 2.2e-33 146.0 130 63.1
Actinidia39070 Actinidia chinensis HOM05D007550 ORTHO05D009474 2.9e-33 145.6 128 59.4
FAN16G0277 Fragaria x ananassa HOM05D007550 ORTHO05D009474 4.9e-33 144.8 95 74.7
Duzib213G0332 Durio zibethinus HOM05D007550 ORTHO05D009474 8.4e-33 144.1 101 70.3
Gorai.002G096500 Gossypium raimondii HOM05D007550 ORTHO05D009474 1.4e-32 143.3 99 70.7
Medtr5g094600 Medicago truncatula HOM05D007550 ORTHO05D009474 1.9e-32 142.9 102 63.7
CDE06G2160 Ceratophyllum demersum HOM05D007550 ORTHO05D009474 2.4e-32 142.5 120 59.2
Gohir.A01G087300 Gossypium hirsutum HOM05D007550 ORTHO05D009474 1.6e-31 139.8 99 69.7
Psat2g008720 Pisum sativum HOM05D007550 ORTHO05D009474 1.6e-31 139.8 129 57.4
A10p12800 Brassica napus HOM05D007550 ORTHO05D009474 2.7e-31 139.0 133 56.4
BraA10t43373Z Brassica rapa HOM05D007550 ORTHO05D009474 2.7e-31 139.0 133 56.4
Thhalv10014968m.g Eutrema salsugineum HOM05D007550 ORTHO05D009474 3.5e-31 138.7 95 68.4
MELO3C014132.2 Cucumis melo HOM05D007550 ORTHO05D009474 7.9e-31 137.5 120 61.7
Phvul.008G275600 Phaseolus vulgaris HOM05D007550 ORTHO05D009474 7.9e-31 137.5 150 56.7
Sabra02G0058600 Salix brachista HOM05D007550 ORTHO05D009474 1.0e-30 137.1 158 53.8
Lalb_Chr17g0348791 Lupinus albus HOM05D007550 ORTHO05D009474 1.3e-30 136.7 148 56.8
THA.LOC104817699 Tarenaya hassleriana HOM05D007550 ORTHO05D009474 1.3e-30 136.7 123 62.6
Solyc12g015630.2 Solanum lycopersicum HOM05D007550 ORTHO05D009474 1.8e-30 136.3 88 71.6
PGSC0003DMG400029800 Solanum tuberosum HOM05D007550 ORTHO05D009474 1.8e-30 136.3 96 67.7
AT5G55570 Arabidopsis thaliana HOM05D007550 ORTHO05D009474 2.3e-30 136.0 87 69.0
Hma1.2p1_0036F.1_g022730 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 2.3e-30 136.0 86 76.7
Aa31LG3G11520 Aethionema arabicum HOM05D007550 ORTHO05D009474 5.1e-30 134.8 138 56.5
C09p46340 Brassica napus HOM05D007550 ORTHO05D009474 5.1e-30 134.8 133 55.6
BolC9t57498H Brassica oleracea HOM05D007550 ORTHO05D009474 5.1e-30 134.8 133 55.6
Sed0001315 Sechium edule HOM05D007550 ORTHO05D009474 6.7e-30 134.4 89 69.7
CAN.G410.43 Capsicum annuum HOM05D007550 ORTHO05D009474 8.7e-30 134.0 81 72.8
Peaxi162Scf00955g00219 Petunia axillaris HOM05D007550 ORTHO05D009474 1.1e-29 133.7 135 54.1
Migut.M01677 Erythranthe guttata HOM05D007550 ORTHO05D009474 1.9e-29 132.9 90 68.9
ATR1149G080 Amborella trichopoda HOM05D007550 ORTHO05D009474 2.5e-29 132.5 134 52.2
HanXRQChr13g0408011 Helianthus annuus HOM05D007550 ORTHO05D009474 3.3e-29 132.1 80 75.0
DCAR_022604 Daucus carota HOM05D007550 ORTHO05D009474 5.6e-29 131.3 95 65.3
COL.COLO4_09786 Corchorus olitorius HOM05D007550 ORTHO05D009474 7.4e-29 131.0 104 62.5
CsaV3_3G004390 Cucumis sativus L. HOM05D007550 ORTHO05D009474 7.4e-29 131.0 125 57.6
Sopen12g007530 Solanum pennellii HOM05D007550 ORTHO05D009474 1.3e-28 130.2 88 70.5
Nitab4.5_0000163g0330 Nicotiana tabacum HOM05D007550 ORTHO05D009474 1.6e-28 129.8 87 67.8
Os01g0762300 Oryza sativa ssp. japonica HOM05D007550 ORTHO05D009474 2.1e-28 129.4 71 76.1
AL8G31140 Arabidopsis lyrata HOM05D007550 ORTHO05D009474 3.6e-28 128.6 140 51.4
Nitab4.5_0001750g0040 Nicotiana tabacum HOM05D007550 ORTHO05D009474 3.6e-28 128.6 89 64.0
MSTRG.6984 Avicennia marina HOM05D007550 ORTHO05D009474 8.1e-28 127.5 103 65.0
HPP92_028367 Vanilla planifolia HOM05D007550 ORTHO05D009474 8.1e-28 127.5 139 50.4
ECA240G1453 Erigeron canadensis HOM05D007550 ORTHO05D009474 1.8e-27 126.3 127 54.3
Potri.011G085501 Populus trichocarpa HOM05D007550 ORTHO05D009474 1.8e-27 126.3 143 55.9
CARHR268880 Cardamine hirsuta HOM05D007550 ORTHO05D009474 2.4e-27 125.9 142 50.7
Zm00001eb370450 Zea mays HOM05D007550 ORTHO05D009474 1.2e-26 123.6 94 61.7
Cfa020230 Carpinus fangiana HOM05D007550 ORTHO05D009474 2.6e-26 122.5 118 57.6
arahy.Tifrunner.gnm1.ann1.S0MYI4 Arachis hypogaea HOM05D007550 ORTHO05D009474 3.4e-26 122.1 104 57.7
Cc05_g14670 Coffea canephora HOM05D007550 ORTHO05D009474 7.6e-26 120.9 93 63.4
FAN25G3253 Fragaria x ananassa HOM05D007550 ORTHO05D009474 2.2e-25 119.4 83 74.7
FAN25G1734 Fragaria x ananassa HOM05D007550 ORTHO05D009474 6.4e-25 117.9 83 73.5
Mapoly0128s0022 Marchantia polymorpha HOM05D007550 ORTHO05D009474 8.4e-25 117.5 108 58.3
PGR031G0516 Punica granatum HOM05D007550 ORTHO05D009474 8.4e-25 117.5 73 78.1
AagrBONN_evm.TU.Sc2ySwM_344.2781 Anthoceros agrestis HOM05D007550 ORTHO05D009474 1.4e-24 116.7 108 53.7
Ciclev10009869m.g Citrus clementina HOM05D007550 ORTHO05D009474 2.4e-24 115.9 133 57.9
FAN21G0016 Fragaria x ananassa HOM05D007550 ORTHO05D009474 2.4e-24 115.9 82 73.2
VMungo0647G1572 Vigna mungo HOM05D007550 ORTHO05D009474 7.1e-24 114.4 86 68.6
arahy.Tifrunner.gnm1.ann1.R7ZLS4 Arachis hypogaea HOM05D007550 ORTHO05D009474 1.2e-23 113.6 145 44.8
CBR_g30607 Chara braunii HOM05D007550 ORTHO05D009474 3.5e-23 112.1 121 53.7
ClCG10G004590 Citrullus lanatus HOM05D007550 ORTHO05D009474 4.6e-23 111.7 117 55.6
Gohir.D01G073600 Gossypium hirsutum HOM05D007550 ORTHO05D009474 1.3e-22 110.2 84 67.9
Oeu005969.1 Olea europaea HOM05D007550 ORTHO05D009474 1.8e-22 109.8 121 53.7
Glyma.14G015900 Glycine max HOM05D007550 ORTHO05D009474 2.3e-22 109.4 132 54.5
BcaB08g35917 Brassica carinata HOM05D007550 ORTHO05D009474 5.1e-22 108.2 133 48.1
EL10Ac4g07615 Beta vulgaris HOM05D007550 ORTHO05D009474 1.6e-20 103.2 89 57.3
Aqoxy4G02213 Aquilegia oxysepala HOM05D007550 ORTHO05D009474 2.4e-19 99.4 117 52.1
CANSAT56G0742 Cannabis sativa HOM05D007550 ORTHO05D009474 4.0e-19 98.6 110 53.6
Carub.0008s1594 Capsella rubella HOM05D007550 ORTHO05D009474 9.0e-19 97.4 126 47.6
Hma1.2p1_0036F.1_g022720 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 1.5e-18 96.7 148 45.9
unitig_899.g15275 Utricularia gibba HOM05D007550 ORTHO05D009474 1.5e-18 96.7 72 66.7
PSO541G5298 Papaver somniferum HOM05D007550 ORTHO05D009474 5.8e-18 94.7 117 50.4
PSO675G9283 Papaver somniferum HOM05D007550 ORTHO05D009474 5.8e-18 94.7 117 50.4
SGA_v2.0_scaffold168G38530 Striga asiatica HOM05D007550 ORTHO05D009474 7.1e-16 87.8 76 56.6
PRCOL_00004706 Prasinoderma coloniale HOM05D007550 ORTHO05D009474 1.6e-15 86.7 85 54.1
Pp3c18_5680 Physcomitrium patens HOM05D007550 ORTHO05D009474 2.1e-15 86.3 91 54.9
Cre03.g145567 Chlamydomonas reinhardtii HOM05D007550 ORTHO05D009474 2.7e-15 85.9 75 54.7
vmacro09669 Vaccinium macrocarpon HOM05D007550 ORTHO05D009474 1.4e-11 73.6 100 46.0
Potri.011G085700 Populus trichocarpa HOM05D007550 ORTHO05D009474 1.5e-10 70.1 115 48.7
Prupe.4G233900 Prunus persica HOM05D007550 ORTHO05D009474 1.9e-08 63.2 105 41.0
MBI16_g11565_MAGBIO Magnolia biondii HOM05D007550 ORTHO05D009474 2.7e-07 59.3 54 57.4
MBI16_g11563_MAGBIO Magnolia biondii HOM05D007550 ORTHO05D009474 2.3e-06 56.2 32 68.8
Sp6g17490 Schrenkiella parvula HOM05D007550 ORTHO05D009474 5.1e-06 55.1 128 38.3


User provided reference genes

Program Settings