Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G057600 Manihot esculenta HOM05D007278 ORTHO05D009280 1.2e-228 796.2 424 100.0
Sabra16G0243500 Salix brachista HOM05D007278 ORTHO05D009280 2.5e-112 409.8 433 57.3
Potri.001G370700 Populus trichocarpa HOM05D007278 ORTHO05D009280 3.2e-112 409.5 429 56.2
GSVIVG01014732001 Vitis vinifera HOM05D007278 ORTHO05D009280 6.3e-108 395.2 459 50.3
Haze_09857 Corylus avellana HOM05D007278 ORTHO05D009280 5.4e-107 392.1 461 52.5
Cfa016926 Carpinus fangiana HOM05D007278 ORTHO05D009280 1.5e-104 384.0 464 51.1
Ciclev10010817m.g Citrus clementina HOM05D007278 ORTHO05D009280 4.0e-102 375.9 407 56.0
Atru.chr2.3762 Acer truncatum HOM05D007278 ORTHO05D009280 1.7e-100 370.5 434 51.2
MD11G1036100 Malus domestica HOM05D007278 ORTHO05D009280 2.2e-100 370.2 412 52.7
Gorai.013G150800 Gossypium raimondii HOM05D007278 ORTHO05D009280 1.1e-99 367.9 441 50.8
Atru.chr2.3748 Acer truncatum HOM05D007278 ORTHO05D009280 3.1e-99 366.3 434 50.9
Gohir.D13G134500 Gossypium hirsutum HOM05D007278 ORTHO05D009280 3.5e-98 362.8 441 50.6
TWI38G0395 Tripterygium wilfordii HOM05D007278 ORTHO05D009280 1.7e-97 360.5 430 50.9
Gohir.A13G131200 Gossypium hirsutum HOM05D007278 ORTHO05D009280 9.5e-96 354.8 441 50.1
Rhsim04G0010900 Rhododendron simsii HOM05D007278 ORTHO05D009280 3.6e-95 352.8 453 49.0
TAR626G0410 Trochodendron aralioides HOM05D007278 ORTHO05D009280 3.6e-95 352.8 446 47.3
Actinidia03626 Actinidia chinensis HOM05D007278 ORTHO05D009280 4.0e-94 349.4 449 47.9
Duzib213G0397 Durio zibethinus HOM05D007278 ORTHO05D009280 1.5e-93 347.4 442 49.3
Lj8A180T100 Lonicera japonica HOM05D007278 ORTHO05D009280 8.3e-92 341.7 457 48.4
Hma1.2p1_1094F.1_g256380 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 9.2e-91 338.2 423 49.6
CSS0042987 Camellia sinensis var. sinensis HOM05D007278 ORTHO05D009280 7.8e-90 335.1 451 47.5
vmacro09628 Vaccinium macrocarpon HOM05D007278 ORTHO05D009280 3.3e-88 329.7 438 47.3
Thecc.07G008600 Theobroma cacao HOM05D007278 ORTHO05D009280 6.2e-87 325.5 442 48.6
FvH4_3g42411 Fragaria vesca HOM05D007278 ORTHO05D009280 4.0e-86 322.8 408 49.3
ClCG10G004340 Citrullus lanatus HOM05D007278 ORTHO05D009280 1.5e-85 320.9 433 47.8
COL.COLO4_07734 Corchorus olitorius HOM05D007278 ORTHO05D009280 1.5e-85 320.9 413 48.2
FAN21G2048 Fragaria x ananassa HOM05D007278 ORTHO05D009280 7.5e-85 318.5 404 48.0
THA.LOC104822724 Tarenaya hassleriana HOM05D007278 ORTHO05D009280 1.7e-84 317.4 439 47.2
FAN28G1934 Fragaria x ananassa HOM05D007278 ORTHO05D009280 2.2e-84 317.0 408 48.5
FAN11G3173 Fragaria x ananassa HOM05D007278 ORTHO05D009280 3.7e-84 316.2 408 49.0
FAN16G1801 Fragaria x ananassa HOM05D007278 ORTHO05D009280 3.2e-83 313.2 408 48.5
HanXRQChr11g0334411 Helianthus annuus HOM05D007278 ORTHO05D009280 4.3e-80 302.8 432 43.8
MELO3C014108.2 Cucumis melo HOM05D007278 ORTHO05D009280 1.1e-78 298.1 438 46.1
Sp1g41410 Schrenkiella parvula HOM05D007278 ORTHO05D009280 1.1e-78 298.1 423 45.4
Sed0005179 Sechium edule HOM05D007278 ORTHO05D009280 3.1e-78 296.6 476 44.3
AT1G55830 Arabidopsis thaliana HOM05D007278 ORTHO05D009280 1.2e-77 294.7 420 44.8
Aa31LG10G360 Aethionema arabicum HOM05D007278 ORTHO05D009280 1.5e-77 294.3 432 43.5
PSO210G1309 Papaver somniferum HOM05D007278 ORTHO05D009280 5.8e-77 292.4 428 42.5
Dinv10356 Davidia involucrata HOM05D007278 ORTHO05D009280 8.3e-76 288.5 380 49.5
RcHm_v2.0_Chr5g0075911 Rosa chinensis HOM05D007278 ORTHO05D009280 2.4e-75 287.0 404 45.3
AL1G63950 Arabidopsis lyrata HOM05D007278 ORTHO05D009280 7.1e-75 285.4 424 44.1
Nn7g37466 Nelumbo nucifera HOM05D007278 ORTHO05D009280 9.2e-75 285.0 462 41.3
PGR031G2600 Punica granatum HOM05D007278 ORTHO05D009280 3.5e-74 283.1 415 43.6
QL08p003254 Quercus lobata HOM05D007278 ORTHO05D009280 4.6e-74 282.7 356 50.3
CANSAT11G0150 Cannabis sativa HOM05D007278 ORTHO05D009280 6.0e-74 282.3 408 43.4
Cpa.g.sc12.134 Carica papaya HOM05D007278 ORTHO05D009280 7.8e-74 282.0 416 44.7
Prupe.6G026900 Prunus persica HOM05D007278 ORTHO05D009280 1.0e-73 281.6 334 52.1
BcaB07g33186 Brassica carinata HOM05D007278 ORTHO05D009280 8.6e-73 278.5 414 45.2
ATR0751G235 Amborella trichopoda HOM05D007278 ORTHO05D009280 1.9e-72 277.3 460 41.1
Oeu005473.1 Olea europaea HOM05D007278 ORTHO05D009280 2.1e-71 273.9 412 45.4
CiPaw.11G206100 Carya illinoinensis HOM05D007278 ORTHO05D009280 3.1e-70 270.0 380 47.1
Migut.M01628 Erythranthe guttata HOM05D007278 ORTHO05D009280 3.1e-70 270.0 411 44.3
Peaxi162Scf00139g00103 Petunia axillaris HOM05D007278 ORTHO05D009280 4.0e-70 269.6 427 43.6
Nitab4.5_0010643g0030 Nicotiana tabacum HOM05D007278 ORTHO05D009280 5.2e-70 269.2 432 43.1
Solyc07g065760.3 Solanum lycopersicum HOM05D007278 ORTHO05D009280 2.6e-69 266.9 437 41.6
SalBow8G0571 Salvia bowleyana HOM05D007278 ORTHO05D009280 4.4e-69 266.2 407 43.7
SalBow8G0318 Salvia bowleyana HOM05D007278 ORTHO05D009280 7.6e-69 265.4 407 44.0
Lsat_1_v5_gn_7_114160 Lactuca sativa HOM05D007278 ORTHO05D009280 1.3e-68 264.6 406 42.9
EL10Ac4g07533 Beta vulgaris HOM05D007278 ORTHO05D009280 6.4e-68 262.3 445 41.1
PGSC0003DMG400022161 Solanum tuberosum HOM05D007278 ORTHO05D009280 6.4e-68 262.3 447 41.8
ECA236G2022 Erigeron canadensis HOM05D007278 ORTHO05D009280 1.1e-67 261.5 416 39.9
Sopen07g033970 Solanum pennellii HOM05D007278 ORTHO05D009280 1.1e-67 261.5 435 41.6
Nitab4.5_0000152g0330 Nicotiana tabacum HOM05D007278 ORTHO05D009280 3.2e-67 260.0 432 42.1
BcaC08g43656 Brassica carinata HOM05D007278 ORTHO05D009280 4.6e-66 256.1 409 41.1
C06p10730 Brassica napus HOM05D007278 ORTHO05D009280 4.6e-66 256.1 409 41.1
BolC6t36159H Brassica oleracea HOM05D007278 ORTHO05D009280 1.3e-65 254.6 413 40.7
BraSC56t46403Z Brassica rapa HOM05D007278 ORTHO05D009280 7.3e-64 248.8 414 41.5
Cc05_g15160 Coffea canephora HOM05D007278 ORTHO05D009280 1.3e-60 238.0 420 41.0
HPP92_028502 Vanilla planifolia HOM05D007278 ORTHO05D009280 2.2e-60 237.3 406 39.7
SEGI_11808 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 8.7e-57 225.3 521 33.8
Lj6g0007693 Lotus japonicus HOM05D007278 ORTHO05D009280 5.6e-56 222.6 192 63.5
CDE10G0141 Ceratophyllum demersum HOM05D007278 ORTHO05D009280 2.8e-55 220.3 424 38.4
Phvul.006G059206 Phaseolus vulgaris HOM05D007278 ORTHO05D009280 8.1e-55 218.8 192 61.5
Glyma.18G074900 Glycine max HOM05D007278 ORTHO05D009280 2.4e-54 217.2 192 62.5
Lalb_Chr20g0114071 Lupinus albus HOM05D007278 ORTHO05D009280 4.0e-54 216.5 192 60.9
Ca_12446_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 2.6e-53 213.8 192 63.0
Psat5g165280 Pisum sativum HOM05D007278 ORTHO05D009280 4.9e-52 209.5 323 46.1
TPR.G17958 Trifolium pratense HOM05D007278 ORTHO05D009280 2.4e-51 207.2 254 50.0
CAN.G623.31 Capsicum annuum HOM05D007278 ORTHO05D009280 4.2e-51 206.5 334 44.0
VMungo0540G0529 Vigna mungo HOM05D007278 ORTHO05D009280 5.4e-51 206.1 192 60.4
Thhalv10011545m.g Eutrema salsugineum HOM05D007278 ORTHO05D009280 1.2e-50 204.9 325 41.5
MD03G1032400 Malus domestica HOM05D007278 ORTHO05D009280 6.7e-49 199.1 184 61.4
CsaV3_3G004120 Cucumis sativus L. HOM05D007278 ORTHO05D009280 4.3e-48 196.4 203 56.7
Carub.0001s4440 Capsella rubella HOM05D007278 ORTHO05D009280 6.2e-47 192.6 336 40.8
Ca_14732_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 1.2e-45 188.3 164 63.4
AUR62035670 Chenopodium quinoa HOM05D007278 ORTHO05D009280 1.3e-44 184.9 386 38.3
CARHR045530 Cardamine hirsuta HOM05D007278 ORTHO05D009280 1.6e-42 177.9 332 39.8
Eucgr.F03677 Eucalyptus grandis HOM05D007278 ORTHO05D009280 1.3e-41 174.9 194 55.2
AUR62017137 Chenopodium quinoa HOM05D007278 ORTHO05D009280 5.6e-40 169.5 386 36.5
Aqoxy1G02222 Aquilegia oxysepala HOM05D007278 ORTHO05D009280 4.0e-38 163.3 237 43.5
arahy.Tifrunner.gnm1.ann1.BC78PS Arachis hypogaea HOM05D007278 ORTHO05D009280 1.0e-36 158.7 196 49.0
Pp3c7_290 Physcomitrium patens HOM05D007278 ORTHO05D009280 3.8e-36 156.8 510 26.3
arahy.Tifrunner.gnm1.ann1.E9ZV4R Arachis hypogaea HOM05D007278 ORTHO05D009280 4.2e-35 153.3 196 48.0
Hund23054 Selenicereus undatus HOM05D007278 ORTHO05D000105 7.9e-34 149.1 372 33.6
AagrBONN_evm.TU.Sc2ySwM_344.4166 Anthoceros agrestis HOM05D007278 ORTHO05D009280 1.3e-31 141.7 532 25.4
Ah.09g234860 Amaranthus hybridus HOM05D007278 ORTHO05D009280 2.2e-28 131.0 343 30.9
HPP92_017877 Vanilla planifolia HOM05D007278 ORTHO05D009280 8.8e-25 119.0 195 38.5
MD03G1032000 Malus domestica HOM05D007278 ORTHO05D009280 7.7e-21 105.9 76 72.4
QL08p003251 Quercus lobata HOM05D007278 ORTHO05D009280 7.7e-21 105.9 87 57.5
Mapoly0076s0093 Marchantia polymorpha HOM05D007278 ORTHO05D009280 6.1e-18 96.3 167 36.5
SEGI_34890 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 2.3e-17 94.4 286 26.2
Thecc.07G008800 Theobroma cacao HOM05D007278 ORTHO05D009280 1.8e-06 58.2 50 66.0


User provided reference genes

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